Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0399
         (679 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014134-2901|AAF53645.3|  491|Drosophila melanogaster CG31741-P...    30   2.5  
BT024229-1|ABC86291.1| 1428|Drosophila melanogaster LP01445p pro...    29   4.4  

>AE014134-2901|AAF53645.3|  491|Drosophila melanogaster CG31741-PA
           protein.
          Length = 491

 Score = 30.3 bits (65), Expect = 2.5
 Identities = 15/40 (37%), Positives = 22/40 (55%)
 Frame = +3

Query: 159 HGQLMTSSEVSAGWSHSASSLICSTSYGTHTLHTGRGPLS 278
           H  L+   + + GW +  ++    T+ G  TLHTGRG LS
Sbjct: 197 HSPLLPVYDNTFGWFYERNN--SKTAEGNFTLHTGRGDLS 234


>BT024229-1|ABC86291.1| 1428|Drosophila melanogaster LP01445p protein.
          Length = 1428

 Score = 29.5 bits (63), Expect = 4.4
 Identities = 20/67 (29%), Positives = 35/67 (52%), Gaps = 7/67 (10%)
 Frame = +3

Query: 111  SPALREEQPFRLWVLKHGQLMTSSEVSAGWSHSASSLICSTSY-------GTHTLHTGRG 269
            +P LR  +P +  + +   L++ S +S+G S ++ S I   S        G H+LH G+ 
Sbjct: 1227 TPKLRHSEPGKGSMRRPNSLISESSLSSGTSTTSGSSISGGSSSGHNDGGGRHSLHFGKL 1286

Query: 270  PLSLRAS 290
            P++  AS
Sbjct: 1287 PVAHSAS 1293


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 33,074,109
Number of Sequences: 53049
Number of extensions: 735131
Number of successful extensions: 1390
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1336
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1389
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2951284050
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)