Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0396
         (726 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014297-3620|AAF56330.3| 1954|Drosophila melanogaster CG6875-PA...    30   3.7  
AY069309-1|AAL39454.1|  549|Drosophila melanogaster LD02044p pro...    29   8.5  
AE014296-2159|AAF49901.1|  549|Drosophila melanogaster CG10627-P...    29   8.5  

>AE014297-3620|AAF56330.3| 1954|Drosophila melanogaster CG6875-PA
            protein.
          Length = 1954

 Score = 29.9 bits (64), Expect = 3.7
 Identities = 16/33 (48%), Positives = 20/33 (60%)
 Frame = -2

Query: 707  SRMDRFCRTKIWLRSLVWDSQISATFCIGNMFQ 609
            SR+DR  RT   L  L+W S+  +TFC G M Q
Sbjct: 1760 SRLDRLSRTVPHL--LMWCSEFMSTFCYGIMAQ 1790


>AY069309-1|AAL39454.1|  549|Drosophila melanogaster LD02044p
           protein.
          Length = 549

 Score = 28.7 bits (61), Expect = 8.5
 Identities = 14/32 (43%), Positives = 22/32 (68%)
 Frame = -2

Query: 317 IIFHQGWSATIVTVTRTRQSIARTLLLLVEAL 222
           I+F     ATI  V +T++S A+TLLLL++ +
Sbjct: 384 IVFSDNAKATIAQVAQTKES-AKTLLLLIDLI 414


>AE014296-2159|AAF49901.1|  549|Drosophila melanogaster CG10627-PA
           protein.
          Length = 549

 Score = 28.7 bits (61), Expect = 8.5
 Identities = 14/32 (43%), Positives = 22/32 (68%)
 Frame = -2

Query: 317 IIFHQGWSATIVTVTRTRQSIARTLLLLVEAL 222
           I+F     ATI  V +T++S A+TLLLL++ +
Sbjct: 384 IVFSDNAKATIAQVAQTKES-AKTLLLLIDLI 414


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 37,078,619
Number of Sequences: 53049
Number of extensions: 833119
Number of successful extensions: 2319
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 2150
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2316
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3252477558
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)