Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0396
         (726 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81486-5|CAB03987.1|  570|Caenorhabditis elegans Hypothetical pr...    30   1.9  
Z81137-10|CAB03470.2|  232|Caenorhabditis elegans Hypothetical p...    29   3.4  
Z69787-9|CAA93634.1|  226|Caenorhabditis elegans Hypothetical pr...    28   5.9  
Z70750-10|CAA94746.1|  439|Caenorhabditis elegans Hypothetical p...    28   7.8  
U41535-2|AAB63402.1|  731|Caenorhabditis elegans Hypothetical pr...    28   7.8  
U41535-1|AAK67247.1|  734|Caenorhabditis elegans Hypothetical pr...    28   7.8  

>Z81486-5|CAB03987.1|  570|Caenorhabditis elegans Hypothetical
           protein C53A5.6 protein.
          Length = 570

 Score = 29.9 bits (64), Expect = 1.9
 Identities = 16/43 (37%), Positives = 25/43 (58%)
 Frame = +2

Query: 413 ADKLLPTTKGSLQTSFDERRVIAQNPPWRKVHQNNIQDSLNEL 541
           +DK   T K SLQ  F++   ++  PP RK H NNI+  + ++
Sbjct: 199 SDKFAATIK-SLQNYFEKHEKLS--PPGRKTHFNNIEAEMEKI 238


>Z81137-10|CAB03470.2|  232|Caenorhabditis elegans Hypothetical
           protein W02D9.2 protein.
          Length = 232

 Score = 29.1 bits (62), Expect = 3.4
 Identities = 15/44 (34%), Positives = 20/44 (45%)
 Frame = -3

Query: 217 LVMQIGRNWQGVL*VVQLFGSSIDRDRLAYFYVLSFFYCLVGWM 86
           L+  IG  W     +  L G   D+ RL   Y +  FY +V WM
Sbjct: 184 LITSIGFVWSTYASMGFLAGCQPDKKRLLVIYPVFLFYFVVSWM 227


>Z69787-9|CAA93634.1|  226|Caenorhabditis elegans Hypothetical
           protein C44C10.8 protein.
          Length = 226

 Score = 28.3 bits (60), Expect = 5.9
 Identities = 15/40 (37%), Positives = 21/40 (52%), Gaps = 2/40 (5%)
 Frame = +1

Query: 76  AVSS--STQLSNKKKTEHRNRRGDRGQCWNQTIEPLKEHL 189
           AVSS  ST     +K + R +   R QC N   E L++H+
Sbjct: 11  AVSSLESTDSKKSRKEKSREKEHRRAQCINSAFEILQQHI 50


>Z70750-10|CAA94746.1|  439|Caenorhabditis elegans Hypothetical
           protein C50F4.12 protein.
          Length = 439

 Score = 27.9 bits (59), Expect = 7.8
 Identities = 11/42 (26%), Positives = 25/42 (59%)
 Frame = -1

Query: 339 QDKKINVNNISSRMECHHCNCDEDTAEHSSHPTSAGRSVMAS 214
           ++ KI+++ ++        +CD  + EH  HP+ AG +++A+
Sbjct: 384 KESKIDISEVTDPEGSSKESCDLVSLEHFLHPSDAGFAMLAA 425


>U41535-2|AAB63402.1|  731|Caenorhabditis elegans Hypothetical
           protein F18A1.6a protein.
          Length = 731

 Score = 27.9 bits (59), Expect = 7.8
 Identities = 16/50 (32%), Positives = 22/50 (44%)
 Frame = +2

Query: 356 LST*CESSPSLMHISNARGADKLLPTTKGSLQTSFDERRVIAQNPPWRKV 505
           LS  C+S P   HI     A  ++ +T  S    F E R   + PP R +
Sbjct: 280 LSALCQSPPCKNHIKKYEDAFGMMTSTPNSNVFEFREERGHTKTPPPRDI 329


>U41535-1|AAK67247.1|  734|Caenorhabditis elegans Hypothetical
           protein F18A1.6b protein.
          Length = 734

 Score = 27.9 bits (59), Expect = 7.8
 Identities = 16/50 (32%), Positives = 22/50 (44%)
 Frame = +2

Query: 356 LST*CESSPSLMHISNARGADKLLPTTKGSLQTSFDERRVIAQNPPWRKV 505
           LS  C+S P   HI     A  ++ +T  S    F E R   + PP R +
Sbjct: 283 LSALCQSPPCKNHIKKYEDAFGMMTSTPNSNVFEFREERGHTKTPPPRDI 332


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,893,048
Number of Sequences: 27780
Number of extensions: 420116
Number of successful extensions: 1152
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1106
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1150
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1708383636
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)