Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0394
         (741 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicas...    48   8e-08
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    23   3.4  
AJ850290-1|CAH64510.1|  533|Tribolium castaneum putative esteras...    22   4.5  
AY769607-1|AAV40983.1|  196|Tribolium castaneum heat shock cogna...    22   6.0  
AY769606-1|AAV40982.1|  196|Tribolium castaneum heat shock prote...    22   6.0  
AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory recept...    21   7.9  

>AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicase
           protein.
          Length = 580

 Score = 48.0 bits (109), Expect = 8e-08
 Identities = 25/75 (33%), Positives = 43/75 (57%), Gaps = 4/75 (5%)
 Frame = +2

Query: 497 KEFSGVAKTGSGKTLAYILPAIVHI--NNQPPIRRGD--GPIALVLAPTRELAQQIQQVA 664
           ++    A+TGSGKT A++LP I ++  +  PP    +   P+ ++++PTRELA QI    
Sbjct: 196 RDLMSCAQTGSGKTAAFMLPIIHNLLSDKNPPNTENNCAQPVVVIMSPTRELAIQIADQG 255

Query: 665 ADFGHTSYVRNTCVF 709
             F + S V+   ++
Sbjct: 256 KKFAYNSTVKVAVIY 270



 Score = 43.6 bits (98), Expect = 2e-06
 Identities = 20/56 (35%), Positives = 33/56 (58%)
 Frame = +3

Query: 345 EVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVA 512
           EV V+G +   PI  FE +    ++ + VK  GY +PT IQ    P+ +SG++L++
Sbjct: 145 EVKVTGNDAPPPITSFETSGLRPHLLENVKKSGYTKPTAIQKYAIPVILSGRDLMS 200


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 9/26 (34%), Positives = 12/26 (46%)
 Frame = -3

Query: 580  LVVYVHNGWQDVGQRFAGTRFGYATK 503
            L+V  H+ W D   +F     GY  K
Sbjct: 1442 LIVKAHDSWADFDNQFYKRVTGYKAK 1467


>AJ850290-1|CAH64510.1|  533|Tribolium castaneum putative esterase
           protein.
          Length = 533

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = +3

Query: 3   DPASERIHSLNKHLQLNPKN 62
           DP SER+    + L++NP N
Sbjct: 512 DPDSERMAFWQRILKINPNN 531


>AY769607-1|AAV40983.1|  196|Tribolium castaneum heat shock cognate
           70 protein.
          Length = 196

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 10/53 (18%), Positives = 24/53 (45%)
 Frame = -1

Query: 195 TKSSRSSKSIATVAKSRRIIAEFVASSKFGTTVSTAIIPVTRHDYFSDLVEDV 37
           T+  R+ +++++  ++   I        + TT++ A       DYF   ++ V
Sbjct: 93  TQCERAKRTLSSATQASIEIDSLFDGIDYSTTITRARFEDINMDYFKKCIDPV 145


>AY769606-1|AAV40982.1|  196|Tribolium castaneum heat shock protein
           70 protein.
          Length = 196

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 10/53 (18%), Positives = 24/53 (45%)
 Frame = -1

Query: 195 TKSSRSSKSIATVAKSRRIIAEFVASSKFGTTVSTAIIPVTRHDYFSDLVEDV 37
           T+  R+ +++++  ++   I        + TT++ A       DYF   ++ V
Sbjct: 93  TQCERAKRTLSSATQASIEIDSLFDGIDYSTTITRARFEDINMDYFKKCIDPV 145


>AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory
          receptor candidate 50 protein.
          Length = 350

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = -1

Query: 90 AIIPVTRHDYFSDLVEDVYL 31
          A++PV +H     LV  VYL
Sbjct: 18 ALLPVKKHHRLEKLVPCVYL 37


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 171,145
Number of Sequences: 336
Number of extensions: 3898
Number of successful extensions: 10
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19884055
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)