Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0394
(741 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_16431| Best HMM Match : No HMM Matches (HMM E-Value=.) 80 2e-15
SB_18993| Best HMM Match : DEAD (HMM E-Value=9.3e-41) 76 3e-14
SB_45898| Best HMM Match : DEAD (HMM E-Value=1.3e-36) 66 3e-11
SB_3952| Best HMM Match : No HMM Matches (HMM E-Value=.) 62 3e-10
SB_43842| Best HMM Match : RNB (HMM E-Value=0) 62 6e-10
SB_14524| Best HMM Match : DEAD (HMM E-Value=3.7e-17) 58 7e-09
SB_19958| Best HMM Match : No HMM Matches (HMM E-Value=.) 50 1e-06
SB_52320| Best HMM Match : DEAD (HMM E-Value=0) 50 3e-06
SB_37351| Best HMM Match : DEAD (HMM E-Value=0) 49 3e-06
SB_46680| Best HMM Match : Helicase_C (HMM E-Value=3.8e-22) 48 6e-06
SB_11691| Best HMM Match : No HMM Matches (HMM E-Value=.) 48 6e-06
SB_25090| Best HMM Match : No HMM Matches (HMM E-Value=.) 47 2e-05
SB_56998| Best HMM Match : No HMM Matches (HMM E-Value=.) 46 2e-05
SB_5994| Best HMM Match : zf-CCHC (HMM E-Value=2.2e-19) 44 1e-04
SB_38262| Best HMM Match : No HMM Matches (HMM E-Value=.) 43 2e-04
SB_9558| Best HMM Match : DEAD (HMM E-Value=0) 43 3e-04
SB_34731| Best HMM Match : DEAD (HMM E-Value=3.8e-31) 42 4e-04
SB_44408| Best HMM Match : DEAD (HMM E-Value=6.8005e-42) 42 5e-04
SB_52411| Best HMM Match : No HMM Matches (HMM E-Value=.) 41 0.001
SB_18655| Best HMM Match : No HMM Matches (HMM E-Value=.) 41 0.001
SB_17563| Best HMM Match : DEAD (HMM E-Value=0) 40 0.003
SB_2247| Best HMM Match : DEAD (HMM E-Value=0) 40 0.003
SB_51015| Best HMM Match : DEAD (HMM E-Value=0.0057) 36 0.026
SB_40196| Best HMM Match : DEAD (HMM E-Value=3.5e-07) 36 0.034
SB_41683| Best HMM Match : DEAD (HMM E-Value=1.5e-27) 34 0.11
SB_45527| Best HMM Match : DEAD (HMM E-Value=0.0069) 34 0.14
SB_30826| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.14
SB_57459| Best HMM Match : DEAD (HMM E-Value=1.50001e-40) 34 0.14
SB_49218| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.3
SB_32980| Best HMM Match : DEAD (HMM E-Value=0) 30 1.7
SB_6554| Best HMM Match : Isy1 (HMM E-Value=0) 30 2.3
SB_51151| Best HMM Match : Vicilin_N (HMM E-Value=0.19) 29 3.0
SB_48046| Best HMM Match : DEAD (HMM E-Value=4e-38) 29 3.0
SB_28853| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.0
>SB_16431| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 790
Score = 80.2 bits (189), Expect = 2e-15
Identities = 37/71 (52%), Positives = 48/71 (67%)
Frame = +2
Query: 497 KEFSGVAKTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 676
++ G+AKTGSGKT A++ PA+VHI +QP ++ GDGPI L+ APTREL QQI A FG
Sbjct: 555 RDIIGIAKTGSGKTAAFLWPALVHIMDQPELQVGDGPIVLICAPTRELCQQIYTEARRFG 614
Query: 677 HTSYVRNTCVF 709
+ VF
Sbjct: 615 KAYNIHVVAVF 625
Score = 73.3 bits (172), Expect = 2e-13
Identities = 34/100 (34%), Positives = 54/100 (54%), Gaps = 4/100 (4%)
Frame = +3
Query: 258 QPFNKNFYDPHPTVLKRSPYEVEEYRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKT 437
+PFNKNFY+ HP + K+S E+++ R + VSG P F F + + ++
Sbjct: 475 KPFNKNFYEEHPEITKQSKQEIDDLRKKMGIKVSGAMPARPCISFAHFGFDEQMMASIRK 534
Query: 438 MGYKEPTPIQAQGWPIAMSGKNLVA*PK----RVPAKRWP 545
+ Y +PT IQ Q PIA+SG++++ K + A WP
Sbjct: 535 LEYTQPTQIQCQALPIALSGRDIIGIAKTGSGKTAAFLWP 574
>SB_18993| Best HMM Match : DEAD (HMM E-Value=9.3e-41)
Length = 690
Score = 75.8 bits (178), Expect = 3e-14
Identities = 33/55 (60%), Positives = 43/55 (78%)
Frame = +2
Query: 545 YILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVF 709
+ILP IVHIN+QP ++ GDGPI LVL PTRELAQQ+Q+VA G +R+TC++
Sbjct: 113 FILPGIVHINHQPLLQPGDGPIVLVLCPTRELAQQVQEVAYSVGKHCKLRSTCIY 167
Score = 60.9 bits (141), Expect = 1e-09
Identities = 27/56 (48%), Positives = 37/56 (66%)
Frame = +3
Query: 306 RSPYEVEEYRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQ 473
R +EV+ YR + ++TV+G V P+ FEE+ FPDY+Q K G+ EPT IQAQ
Sbjct: 57 RGQHEVDAYRRSKDLTVNGRNVPKPVTTFEESAFPDYIQSYFKREGFTEPTMIQAQ 112
>SB_45898| Best HMM Match : DEAD (HMM E-Value=1.3e-36)
Length = 428
Score = 66.1 bits (154), Expect = 3e-11
Identities = 35/74 (47%), Positives = 46/74 (62%), Gaps = 4/74 (5%)
Frame = +2
Query: 497 KEFSGVAKTGSGKTLAYILPAIVHINNQPPIRRGD----GPIALVLAPTRELAQQIQQVA 664
++ GVA+TGSGKT A+ +P +V I P I R + GP AL+LAPTRELAQQI++
Sbjct: 139 RDIIGVAETGSGKTAAFAIPLLVWIMGLPKIERDNDADQGPYALILAPTRELAQQIEEEI 198
Query: 665 ADFGHTSYVRNTCV 706
FG +R V
Sbjct: 199 LKFGRPLGIRTVSV 212
Score = 51.6 bits (118), Expect = 6e-07
Identities = 20/60 (33%), Positives = 37/60 (61%)
Frame = +3
Query: 330 YRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLV 509
+R + ++ G + PI+ ++EA PD + + V +GYK+PTPIQ Q PI + ++++
Sbjct: 83 FREDFNISTKGGRIPFPIRKWKEAQIPDSILEIVDKLGYKDPTPIQRQAIPIGLQNRDII 142
>SB_3952| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 592
Score = 62.5 bits (145), Expect = 3e-10
Identities = 35/107 (32%), Positives = 57/107 (53%), Gaps = 4/107 (3%)
Frame = +3
Query: 258 QPFNKNFYDPHPTVLKRSPYEVEEYRNNHE-VTVSGVEVHNPIQYFEEANFPDYVQQGVK 434
QPF K+FY P + K +P E +E+R + E + V G P++ + + + +K
Sbjct: 62 QPFRKDFYVEVPELAKMTPEETDEFRLSLENIHVRGKNAPKPVKTWAQTGVQLKILDVLK 121
Query: 435 TMGYKEPTPIQAQGWPIAMSGKNLVA---*PKRVPAKRWPTSCQPLC 566
Y++PTPIQAQ P+ MSG++++A P R A + C+ C
Sbjct: 122 KNSYEKPTPIQAQAIPVIMSGRDMIAIVMTPTRELAIQIHRECKKFC 168
Score = 36.7 bits (81), Expect = 0.020
Identities = 21/59 (35%), Positives = 29/59 (49%)
Frame = +2
Query: 533 KTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVF 709
K +Y P + P I G IA+V+ PTRELA QI + F + +R CV+
Sbjct: 121 KKNSYEKPTPIQAQAIPVIMSGRDMIAIVMTPTRELAIQIHRECKKFCKPNNLRCVCVY 179
>SB_43842| Best HMM Match : RNB (HMM E-Value=0)
Length = 1238
Score = 61.7 bits (143), Expect = 6e-10
Identities = 27/52 (51%), Positives = 37/52 (71%)
Frame = +2
Query: 497 KEFSGVAKTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQI 652
++ G+A+TGSGKTLAY LP + + + P GD P+AL+L PTREL QQ+
Sbjct: 110 RDIIGLAETGSGKTLAYSLPLCMLLRTKAPSNPGDTPVALILTPTRELMQQV 161
Score = 49.2 bits (112), Expect = 3e-06
Identities = 28/101 (27%), Positives = 48/101 (47%)
Frame = +3
Query: 264 FNKNFYDPHPTVLKRSPYEVEEYRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMG 443
F ++YD + V + S V+E R + + + G + PI+ F + N P + +
Sbjct: 32 FMWSYYDENEKVSRLSDEVVDEIRWKNGIHIEGEDCPKPIESFHDLNLPPELSTYLAKKN 91
Query: 444 YKEPTPIQAQGWPIAMSGKNLVA*PKRVPAKRWPTSCQPLC 566
++ PTPIQ Q MSG++++ + K S PLC
Sbjct: 92 FQVPTPIQMQSLSCVMSGRDIIGLAETGSGKTLAYSL-PLC 131
>SB_14524| Best HMM Match : DEAD (HMM E-Value=3.7e-17)
Length = 500
Score = 58.0 bits (134), Expect = 7e-09
Identities = 27/91 (29%), Positives = 48/91 (52%)
Frame = +3
Query: 279 YDPHPTVLKRSPYEVEEYRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPT 458
Y HPT+ + +V++ R+ E+ V G V +P+ F +F + + + + GY PT
Sbjct: 161 YKEHPTIAALTAEQVKQLRDKMEIKVKGEHVVSPVLEFFHCSFNESLSKNLSNHGYHSPT 220
Query: 459 PIQAQGWPIAMSGKNLVA*PKRVPAKRWPTS 551
PIQ Q P+ +SG++++ K P+S
Sbjct: 221 PIQMQVLPVLLSGRDVMVCASTGSGKLLPSS 251
>SB_19958| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 797
Score = 50.4 bits (115), Expect = 1e-06
Identities = 28/63 (44%), Positives = 37/63 (58%), Gaps = 1/63 (1%)
Frame = +2
Query: 497 KEFSGVAKTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 676
++ A+TGSGKT AY+LP + + Q P+AL +APTRELA+QI A F
Sbjct: 517 RDLMACAQTGSGKTAAYMLPVLTSLIKQGLNAPPRSPLALCVAPTRELAKQIYIEARKFS 576
Query: 677 -HT 682
HT
Sbjct: 577 DHT 579
Score = 41.5 bits (93), Expect = 7e-04
Identities = 19/53 (35%), Positives = 28/53 (52%)
Frame = +3
Query: 354 VSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVA 512
VSG I F E F + + + GY+ PTP+Q PI M+G++L+A
Sbjct: 469 VSGENQPPKITSFNELPFGEQLMANISRAGYRRPTPVQKAALPIVMAGRDLMA 521
>SB_52320| Best HMM Match : DEAD (HMM E-Value=0)
Length = 340
Score = 49.6 bits (113), Expect = 3e-06
Identities = 28/61 (45%), Positives = 38/61 (62%)
Frame = +2
Query: 497 KEFSGVAKTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 676
++ G AKTGSGKTLA+++P I + Q DG ALV++PTRELA Q +V G
Sbjct: 88 RDVLGAAKTGSGKTLAFLIPIIETLWRQKWTSM-DGLGALVISPTRELAYQTFEVLVKIG 146
Query: 677 H 679
+
Sbjct: 147 N 147
Score = 31.9 bits (69), Expect = 0.56
Identities = 13/43 (30%), Positives = 24/43 (55%)
Frame = +3
Query: 381 IQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLV 509
++ F + G+ G+ PT IQ QG P+A+SG++++
Sbjct: 49 VEKFSDFPISKRTLDGLMKAGFVTPTDIQKQGIPVALSGRDVL 91
>SB_37351| Best HMM Match : DEAD (HMM E-Value=0)
Length = 688
Score = 49.2 bits (112), Expect = 3e-06
Identities = 27/75 (36%), Positives = 44/75 (58%), Gaps = 1/75 (1%)
Frame = +2
Query: 431 KDNGLQRTDAHSSSRLADSYVWKEFSGVAKTGSGKTLAYILPAIVHINN-QPPIRRGDGP 607
+D G+ +S Y ++ G A+TG+GKTL++ LP + + + + +RG P
Sbjct: 89 EDRGITYLFPIQASTFNYIYDGEDVIGQARTGTGKTLSFALPLVEKLQDGKLSQKRGRAP 148
Query: 608 IALVLAPTRELAQQI 652
LV+APTRELA+Q+
Sbjct: 149 KVLVMAPTRELAKQV 163
>SB_46680| Best HMM Match : Helicase_C (HMM E-Value=3.8e-22)
Length = 1058
Score = 48.4 bits (110), Expect = 6e-06
Identities = 22/64 (34%), Positives = 34/64 (53%), Gaps = 4/64 (6%)
Frame = +3
Query: 318 EVEEYRNNHEVTVSGVEVHNPIQYF----EEANFPDYVQQGVKTMGYKEPTPIQAQGWPI 485
++ +R+ + V G +V +P++ F E FPDY+ V+ GY PTPIQ Q P+
Sbjct: 137 KINLFRHEQHIYVKGADVPDPVETFSQLIERYGFPDYIIHNVQERGYTTPTPIQMQATPL 196
Query: 486 AMSG 497
G
Sbjct: 197 MAHG 200
Score = 27.9 bits (59), Expect = 9.1
Identities = 16/39 (41%), Positives = 22/39 (56%), Gaps = 3/39 (7%)
Frame = +2
Query: 545 YILPAIVHINNQPPIRRG---DGPIALVLAPTRELAQQI 652
Y P + + P + G G A+V++PTRELAQQI
Sbjct: 183 YTTPTPIQMQATPLMAHGPKKSGFRAVVVSPTRELAQQI 221
>SB_11691| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1448
Score = 48.4 bits (110), Expect = 6e-06
Identities = 27/80 (33%), Positives = 43/80 (53%)
Frame = +2
Query: 431 KDNGLQRTDAHSSSRLADSYVWKEFSGVAKTGSGKTLAYILPAIVHINNQPPIRRGDGPI 610
KD G +A ++ G AKTGSGKTLA+++P +V + + + +G
Sbjct: 588 KDMGFTTMTEIQHKSIAPLLKGRDLLGAAKTGSGKTLAFLVP-VVELLYKLQFKTRNGTG 646
Query: 611 ALVLAPTRELAQQIQQVAAD 670
++++PTREL+ Q VA D
Sbjct: 647 VIIISPTRELSLQTYGVARD 666
>SB_25090| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1170
Score = 46.8 bits (106), Expect = 2e-05
Identities = 26/70 (37%), Positives = 37/70 (52%), Gaps = 4/70 (5%)
Frame = +2
Query: 497 KEFSGVAKTGSGKTLAYILPAIVHINN----QPPIRRGDGPIALVLAPTRELAQQIQQVA 664
++ A+TGSGKT A++LP + + N P A+ +APTRELA QI A
Sbjct: 749 RDVMACAQTGSGKTAAFLLPVMTSMMNAGLTSSSFSETQTPQAMCIAPTRELANQIYLEA 808
Query: 665 ADFGHTSYVR 694
F H + +R
Sbjct: 809 RKFAHGTMLR 818
Score = 44.0 bits (99), Expect = 1e-04
Identities = 22/56 (39%), Positives = 32/56 (57%)
Frame = +3
Query: 345 EVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVA 512
EV VSG I FEEAN + V+ YK+PTP+Q PI ++G++++A
Sbjct: 698 EVLVSGNNPVRHINSFEEANLYEAFLNNVRKAQYKKPTPVQKYSIPIVIAGRDVMA 753
>SB_56998| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 478
Score = 46.4 bits (105), Expect = 2e-05
Identities = 27/66 (40%), Positives = 40/66 (60%), Gaps = 2/66 (3%)
Frame = +2
Query: 515 AKTGSGKTLAYILPAIVHINNQPPIRRG-DGPIALVLAPTRELAQQIQQVAADFGHTSYV 691
A++G+GKT + + + I+ + G D ALVLAPTRELAQQIQ+V G +V
Sbjct: 129 AQSGTGKTATFAISILQEIDTNYKDKNGCDCCQALVLAPTRELAQQIQKVVLALGDYMHV 188
Query: 692 R-NTCV 706
+ + C+
Sbjct: 189 KCHACI 194
>SB_5994| Best HMM Match : zf-CCHC (HMM E-Value=2.2e-19)
Length = 185
Score = 44.0 bits (99), Expect = 1e-04
Identities = 22/56 (39%), Positives = 32/56 (57%)
Frame = +3
Query: 345 EVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVA 512
EV VSG I FEEAN + V+ YK+PTP+Q PI ++G++++A
Sbjct: 121 EVLVSGNNPVRHINSFEEANLYEAFLNNVRKAQYKKPTPVQKYSIPIVIAGRDVMA 176
>SB_38262| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1039
Score = 43.2 bits (97), Expect = 2e-04
Identities = 23/70 (32%), Positives = 40/70 (57%)
Frame = +2
Query: 497 KEFSGVAKTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 676
K+ +A+TGSGKT A+++P + G AL+L+PTRELA Q Q+ + G
Sbjct: 319 KDVVAMARTGSGKTAAFLIPMFEKLQTHTA---KVGIRALILSPTRELALQTQKFIKELG 375
Query: 677 HTSYVRNTCV 706
+ ++++ +
Sbjct: 376 RFTGLKSSVI 385
>SB_9558| Best HMM Match : DEAD (HMM E-Value=0)
Length = 436
Score = 42.7 bits (96), Expect = 3e-04
Identities = 25/48 (52%), Positives = 30/48 (62%)
Frame = +2
Query: 509 GVAKTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQI 652
G AKTGSGKT A+ LP + + + P G A+VL PTRELA QI
Sbjct: 49 GCAKTGSGKTAAFALPILQKLCDDP-----YGIFAVVLTPTRELAFQI 91
>SB_34731| Best HMM Match : DEAD (HMM E-Value=3.8e-31)
Length = 978
Score = 42.3 bits (95), Expect = 4e-04
Identities = 27/66 (40%), Positives = 36/66 (54%), Gaps = 5/66 (7%)
Frame = +2
Query: 515 AKTGSGKTLAYILPAIVHINNQPPIRRG-----DGPIALVLAPTRELAQQIQQVAADFGH 679
A+TGSGKTLAY+ P +VH + R G P A ++ P RELA QI + A H
Sbjct: 422 AQTGSGKTLAYLAP-LVHRLREDEERHGILARLKRPRACIVVPARELATQILKTAKSLCH 480
Query: 680 TSYVRN 697
+ R+
Sbjct: 481 HARFRS 486
>SB_44408| Best HMM Match : DEAD (HMM E-Value=6.8005e-42)
Length = 238
Score = 41.9 bits (94), Expect = 5e-04
Identities = 25/60 (41%), Positives = 34/60 (56%)
Frame = +2
Query: 497 KEFSGVAKTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 676
K+ G+A+TGSGKT A+ LP + + + P AL+L PTRELA QI + G
Sbjct: 2 KDVIGLAETGSGKTGAFALPILQALLDNP-----QRLFALILTPTRELAFQISEQCEALG 56
>SB_52411| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 370
Score = 40.7 bits (91), Expect = 0.001
Identities = 26/65 (40%), Positives = 39/65 (60%), Gaps = 1/65 (1%)
Frame = +2
Query: 515 AKTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG-HTSYV 691
A++G+GKT + + + I+ Q +R P ALVL+PTRELA QIQ+V G + S
Sbjct: 41 AQSGTGKTATFSISVLQAIDTQ--LRE---PQALVLSPTRELANQIQKVVLALGDYMSVQ 95
Query: 692 RNTCV 706
+ C+
Sbjct: 96 CHACI 100
>SB_18655| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 697
Score = 40.7 bits (91), Expect = 0.001
Identities = 30/89 (33%), Positives = 46/89 (51%), Gaps = 15/89 (16%)
Frame = +2
Query: 434 DNGLQRTDAHSSSRLADSYVW-KEFSGVAKTGSGKTLAYILPAIVHIN-------NQPPI 589
D G + S + + ++ ++ G A+TGSGKTLA+ +P I HI Q P
Sbjct: 147 DQGFSKPTPIQSLSIPPALLYHRDIIGAAETGSGKTLAFGIPIIQHIEAYKKRKAEQSPS 206
Query: 590 -------RRGDGPIALVLAPTRELAQQIQ 655
+G +AL++APTRELA Q++
Sbjct: 207 DKESDLESQGYPLLALIMAPTRELALQVK 235
>SB_17563| Best HMM Match : DEAD (HMM E-Value=0)
Length = 439
Score = 39.5 bits (88), Expect = 0.003
Identities = 22/54 (40%), Positives = 30/54 (55%)
Frame = +2
Query: 515 AKTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 676
AK G+GKT AY++P + + + ALVL PTRELA Q Q+ + G
Sbjct: 91 AKNGTGKTAAYLVPLLERTDTTKNCIQ-----ALVLVPTRELALQTSQICIELG 139
Score = 32.7 bits (71), Expect = 0.32
Identities = 14/49 (28%), Positives = 28/49 (57%)
Frame = +3
Query: 390 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVA*PKRVPAK 536
FE+ + G+ G+ +P+PIQ + P+A++G++++A K K
Sbjct: 49 FEDYCLKRELLMGIFEKGFDKPSPIQEESIPVALAGRDILARAKNGTGK 97
>SB_2247| Best HMM Match : DEAD (HMM E-Value=0)
Length = 439
Score = 39.5 bits (88), Expect = 0.003
Identities = 22/54 (40%), Positives = 30/54 (55%)
Frame = +2
Query: 515 AKTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 676
AK G+GKT AY++P + + + ALVL PTRELA Q Q+ + G
Sbjct: 91 AKNGTGKTAAYLVPLLERTDTTKNCIQ-----ALVLVPTRELALQTSQICIELG 139
Score = 32.7 bits (71), Expect = 0.32
Identities = 14/49 (28%), Positives = 28/49 (57%)
Frame = +3
Query: 390 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVA*PKRVPAK 536
FE+ + G+ G+ +P+PIQ + P+A++G++++A K K
Sbjct: 49 FEDYCLKRELLMGIFEKGFDKPSPIQEESIPVALAGRDILARAKNGTGK 97
>SB_51015| Best HMM Match : DEAD (HMM E-Value=0.0057)
Length = 96
Score = 36.3 bits (80), Expect = 0.026
Identities = 21/61 (34%), Positives = 34/61 (55%)
Frame = +2
Query: 467 SSRLADSYVWKEFSGVAKTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQ 646
+S + + + K+ A TG+GKT A++LP + + +P + LV+ PTRELA
Sbjct: 38 ASTIPVALMGKDVCACAATGTGKTAAFMLPILERLLYRP--TQSPAIRVLVITPTRELAI 95
Query: 647 Q 649
Q
Sbjct: 96 Q 96
Score = 32.7 bits (71), Expect = 0.32
Identities = 13/30 (43%), Positives = 20/30 (66%)
Frame = +3
Query: 423 QGVKTMGYKEPTPIQAQGWPIAMSGKNLVA 512
+ V +G+ PTPIQA P+A+ GK++ A
Sbjct: 23 RAVNELGFLHPTPIQASTIPVALMGKDVCA 52
>SB_40196| Best HMM Match : DEAD (HMM E-Value=3.5e-07)
Length = 456
Score = 35.9 bits (79), Expect = 0.034
Identities = 20/61 (32%), Positives = 31/61 (50%), Gaps = 3/61 (4%)
Frame = +2
Query: 497 KEFSGVAKTGSGKTLAYILPAIVHINNQPPIRR---GDGPIALVLAPTRELAQQIQQVAA 667
++ +GVA GSGK LAY+LP I I + +GP+ L+L + ++ V
Sbjct: 225 RDVAGVAIEGSGKRLAYLLPIIHQITESSVYQELPLANGPLVLILCTNWQNTARVYGVCE 284
Query: 668 D 670
D
Sbjct: 285 D 285
>SB_41683| Best HMM Match : DEAD (HMM E-Value=1.5e-27)
Length = 559
Score = 34.3 bits (75), Expect = 0.11
Identities = 24/60 (40%), Positives = 37/60 (61%), Gaps = 1/60 (1%)
Frame = +2
Query: 515 AKTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELA-QQIQQVAADFGHTSYV 691
++TG+GK+L ++LP++ Q P RG G I ++ PTRELA Q + +V+ G S V
Sbjct: 204 SETGTGKSLVFLLPSV-----QDP-GRGYGTI--IVVPTRELASQMLYEVSRLLGDKSIV 255
>SB_45527| Best HMM Match : DEAD (HMM E-Value=0.0069)
Length = 120
Score = 33.9 bits (74), Expect = 0.14
Identities = 18/35 (51%), Positives = 23/35 (65%), Gaps = 1/35 (2%)
Frame = +2
Query: 605 PIALVLAPTRELAQQIQQVAADFG-HTSYVRNTCV 706
P ALVL+PTRELA QIQ+V G + S + C+
Sbjct: 4 PQALVLSPTRELANQIQKVVLALGDYMSVQCHACI 38
>SB_30826| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1375
Score = 33.9 bits (74), Expect = 0.14
Identities = 15/44 (34%), Positives = 24/44 (54%)
Frame = +3
Query: 381 IQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVA 512
I FE+ + + + V GYK+PTP+Q PI ++L+A
Sbjct: 874 ILQFEDVDLGEILLHNVGLAGYKKPTPVQKYAIPIVKGKRDLMA 917
Score = 28.7 bits (61), Expect = 5.2
Identities = 11/30 (36%), Positives = 19/30 (63%)
Frame = +2
Query: 497 KEFSGVAKTGSGKTLAYILPAIVHINNQPP 586
++ A+TGSGKT A+++P + I + P
Sbjct: 913 RDLMACAQTGSGKTAAFLIPILSRIYMEGP 942
>SB_57459| Best HMM Match : DEAD (HMM E-Value=1.50001e-40)
Length = 490
Score = 33.9 bits (74), Expect = 0.14
Identities = 19/61 (31%), Positives = 35/61 (57%), Gaps = 1/61 (1%)
Frame = +2
Query: 515 AKTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG-HTSYV 691
+++G+GKT A++L + ++ P P + L+PT ELA+Q +VA G H ++
Sbjct: 149 SQSGTGKTAAFVLTMLSRVDATKPY-----PQVICLSPTYELARQTGKVAEAMGKHCPHI 203
Query: 692 R 694
+
Sbjct: 204 K 204
Score = 29.1 bits (62), Expect = 4.0
Identities = 16/54 (29%), Positives = 29/54 (53%), Gaps = 3/54 (5%)
Frame = +3
Query: 342 HEVTVSGVEVHNPI---QYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMS 494
HEV V + +P+ + FEE +++GV MG+ +P+ IQ P+ ++
Sbjct: 86 HEVEVLRSDPSSPLYSAKSFEELPLSANLRRGVYDMGFNKPSKIQETALPMLLA 139
>SB_49218| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 480
Score = 30.7 bits (66), Expect = 1.3
Identities = 11/38 (28%), Positives = 17/38 (44%)
Frame = +3
Query: 366 EVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGW 479
++H P++ + FP Y + Y P P QA W
Sbjct: 6 DIHGPVRKLHKHGFPGYEEDYAAVFKYPTPWPEQAMEW 43
>SB_32980| Best HMM Match : DEAD (HMM E-Value=0)
Length = 985
Score = 30.3 bits (65), Expect = 1.7
Identities = 17/54 (31%), Positives = 30/54 (55%)
Frame = +2
Query: 515 AKTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 676
AK+G+GKT + + A+ ++ I + ++L PTRE+A Q++ V G
Sbjct: 57 AKSGTGKTCVFSVIALENV-----ITESNCIQIIILTPTREIAVQVKDVICAIG 105
>SB_6554| Best HMM Match : Isy1 (HMM E-Value=0)
Length = 675
Score = 29.9 bits (64), Expect = 2.3
Identities = 17/49 (34%), Positives = 25/49 (51%), Gaps = 2/49 (4%)
Frame = +3
Query: 276 FYDPHPTVLKRSPYEVEEYRNN--HEVTVSGVEVHNPIQYFEEANFPDY 416
+ D VL E EE NN H++ + + +HNP YFE+ + DY
Sbjct: 217 YRDEDDGVLVPIEQEAEEEVNNKLHKILIVNM-IHNPFNYFEKKSPTDY 264
>SB_51151| Best HMM Match : Vicilin_N (HMM E-Value=0.19)
Length = 493
Score = 29.5 bits (63), Expect = 3.0
Identities = 13/42 (30%), Positives = 23/42 (54%), Gaps = 4/42 (9%)
Frame = -3
Query: 169 YCHRCQIEKNYRRICCLL----QIWNHRFHGYYSSYQT*LFF 56
+CHR Q NY C ++ Q+W+H + SS ++ +F+
Sbjct: 178 FCHRQQYRHNYYNSCLVITFFRQMWDHLWANVGSSVESSVFY 219
>SB_48046| Best HMM Match : DEAD (HMM E-Value=4e-38)
Length = 475
Score = 29.5 bits (63), Expect = 3.0
Identities = 19/49 (38%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
Frame = +2
Query: 515 AKTGSGKTLAYILPAIVHINNQPPIRRGDGPIA-LVLAPTRELAQQIQQ 658
AK+G GKT ++L + + P+ DG ++ LV+ TRELA QI +
Sbjct: 91 AKSGMGKTAVFVLATLQQLE---PV---DGQVSVLVMCHTRELAFQIHK 133
>SB_28853| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 208
Score = 29.5 bits (63), Expect = 3.0
Identities = 19/49 (38%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
Frame = +2
Query: 515 AKTGSGKTLAYILPAIVHINNQPPIRRGDGPIA-LVLAPTRELAQQIQQ 658
AK+G GKT ++L + + P+ DG ++ LV+ TRELA QI +
Sbjct: 91 AKSGMGKTAVFVLATLQQLE---PV---DGQVSVLVMCHTRELAFQIHK 133
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,388,377
Number of Sequences: 59808
Number of extensions: 476417
Number of successful extensions: 1297
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 1212
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1281
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1998111622
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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