Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0394
(741 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical pr... 91 1e-18
Z81449-4|CAB03765.1| 811|Caenorhabditis elegans Hypothetical pr... 78 6e-15
AF045641-1|AAK68386.1| 970|Caenorhabditis elegans Hypothetical ... 77 1e-14
U13070-1|AAK67224.1| 730|Caenorhabditis elegans Hypothetical pr... 64 8e-11
AL034488-3|CAA22456.1| 504|Caenorhabditis elegans Hypothetical ... 61 7e-10
AC006665-5|AAF39907.1| 630|Caenorhabditis elegans Hypothetical ... 54 1e-07
AC024810-3|AAU20831.1| 660|Caenorhabditis elegans Vasa- and bel... 52 3e-07
AC024810-2|AAK68520.1| 644|Caenorhabditis elegans Vasa- and bel... 52 3e-07
AC024810-1|AAF60764.1| 641|Caenorhabditis elegans Vasa- and bel... 52 3e-07
Z81094-7|CAB03153.2| 960|Caenorhabditis elegans Hypothetical pr... 48 5e-06
AC024859-14|AAY43989.1| 643|Caenorhabditis elegans Hypothetical... 46 3e-05
AF025451-3|AAB71200.2| 634|Caenorhabditis elegans Hypothetical ... 45 5e-05
AC024876-4|AAU05555.1| 825|Caenorhabditis elegans Hypothetical ... 45 7e-05
AC024876-3|AAU05556.1| 871|Caenorhabditis elegans Hypothetical ... 45 7e-05
Z12116-1|CAA78102.1| 402|Caenorhabditis elegans protein ( C.ele... 44 9e-05
U13876-3|AAA21170.1| 402|Caenorhabditis elegans Initiation fact... 44 9e-05
AF067608-1|AAC17654.2| 544|Caenorhabditis elegans Hypothetical ... 44 9e-05
AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA ... 44 1e-04
AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line hel... 44 1e-04
Z29115-1|CAA82362.1| 489|Caenorhabditis elegans Hypothetical pr... 43 3e-04
AC024753-1|AAF60456.1| 732|Caenorhabditis elegans Hypothetical ... 43 3e-04
U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase pr... 42 3e-04
L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase pr... 42 3e-04
AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line hel... 42 3e-04
AC006661-5|AAF39890.2| 488|Caenorhabditis elegans Hypothetical ... 42 3e-04
AC006661-4|ABB88208.1| 561|Caenorhabditis elegans Hypothetical ... 42 3e-04
U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein. 42 5e-04
U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GL... 42 5e-04
AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line he... 42 5e-04
U80447-2|AAO38637.1| 579|Caenorhabditis elegans Hypothetical pr... 42 6e-04
U80447-1|AAB37806.1| 746|Caenorhabditis elegans Hypothetical pr... 42 6e-04
AC025726-23|AAK73934.1| 763|Caenorhabditis elegans Hypothetical... 41 8e-04
Z22177-1|CAA80151.1| 578|Caenorhabditis elegans Hypothetical pr... 41 0.001
AC006605-1|AAK85443.1| 430|Caenorhabditis elegans Conserved ger... 40 0.002
AF039720-12|AAB96704.1| 399|Caenorhabditis elegans Hypothetical... 37 0.013
AC024844-2|AAK29954.2| 399|Caenorhabditis elegans Hypothetical ... 37 0.013
AF079508-1|AAC28387.1| 1156|Caenorhabditis elegans germline RNA ... 37 0.017
AF039718-2|AAB96745.2| 1156|Caenorhabditis elegans Germ-line hel... 37 0.017
Z75546-3|CAA99891.1| 581|Caenorhabditis elegans Hypothetical pr... 36 0.040
Z50071-3|CAA90407.1| 613|Caenorhabditis elegans Hypothetical pr... 33 0.21
Z50071-2|CAA90406.1| 638|Caenorhabditis elegans Hypothetical pr... 33 0.21
Z50071-1|CAA90408.1| 1022|Caenorhabditis elegans Hypothetical pr... 33 0.21
L17337-1|AAP68928.1| 593|Caenorhabditis elegans Hypothetical pr... 33 0.21
AF125963-6|AAK95885.1| 520|Caenorhabditis elegans Hypothetical ... 33 0.28
U13876-12|AAA21169.1| 363|Caenorhabditis elegans Hypothetical p... 31 1.1
EU051652-1|ABS85191.1| 973|Caenorhabditis elegans MEL-46 protein. 30 2.0
CU457744-1|CAM36366.2| 973|Caenorhabditis elegans Hypothetical ... 30 2.0
AC091124-2|AAK27879.2| 1114|Caenorhabditis elegans Hypothetical ... 30 2.0
Z38112-4|CAA86232.1| 809|Caenorhabditis elegans Hypothetical pr... 29 3.5
Z68220-9|CAL64002.1| 312|Caenorhabditis elegans Hypothetical pr... 29 4.6
Z68220-8|CAA92487.1| 221|Caenorhabditis elegans Hypothetical pr... 29 4.6
U93847-1|AAB58269.1| 760|Caenorhabditis elegans elongation fact... 29 4.6
U93846-1|AAB58268.1| 768|Caenorhabditis elegans elongation fact... 29 4.6
U10414-7|AAN63383.1| 768|Caenorhabditis elegans Elongation fact... 29 4.6
U10414-6|AAN63384.1| 760|Caenorhabditis elegans Elongation fact... 29 4.6
AC006714-20|AAK29723.2| 281|Caenorhabditis elegans Serpentine r... 29 4.6
AC006714-16|AAK29721.3| 281|Caenorhabditis elegans Serpentine r... 29 4.6
>Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical
protein F58E10.3a protein.
Length = 561
Score = 90.6 bits (215), Expect = 1e-18
Identities = 40/71 (56%), Positives = 55/71 (77%)
Frame = +2
Query: 497 KEFSGVAKTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 676
++ +AKTGSGKTLA++LPA+VHI Q +RG+GP LVL PTRELAQQ+Q+V+ DF
Sbjct: 167 RDIISIAKTGSGKTLAFMLPALVHITKQAHRQRGEGPAVLVLLPTRELAQQVQEVSIDFC 226
Query: 677 HTSYVRNTCVF 709
H+ ++ TC+F
Sbjct: 227 HSLGLKMTCLF 237
Score = 64.9 bits (151), Expect = 6e-11
Identities = 50/165 (30%), Positives = 81/165 (49%), Gaps = 3/165 (1%)
Frame = +3
Query: 255 LQPFNKNFYDPHPTVLKRSPYEVEEYRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQGVK 434
L P K+FY + V +R YE++++ + ++VT+ G V P+ F EA P + + +
Sbjct: 87 LTPIEKDFYHENAAVSRREQYEIDQWVSANQVTLEGRGVPRPVFEFNEAPLPGQIHE-LL 145
Query: 435 TMGYKEPTPIQAQGWPIAMSGKNLVA*PKRVPAKRWPTSCQPL--CT*TTNRLFGEVMVR 608
+++PT IQ+ WPIAMSG+++++ K K L T +R GE
Sbjct: 146 YGKFQKPTVIQSISWPIAMSGRDIISIAKTGSGKTLAFMLPALVHITKQAHRQRGEGPAV 205
Query: 609 LLWSWRLPES*HNKFSKLLQILDTHLMFVTRVC-FGGAPKREQAR 740
L+ LP + + + I H + + C FGGA K QAR
Sbjct: 206 LV---LLPTRELAQQVQEVSIDFCHSLGLKMTCLFGGASKGPQAR 247
>Z81449-4|CAB03765.1| 811|Caenorhabditis elegans Hypothetical
protein C46F11.4 protein.
Length = 811
Score = 78.2 bits (184), Expect = 6e-15
Identities = 34/71 (47%), Positives = 49/71 (69%)
Frame = +2
Query: 497 KEFSGVAKTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 676
++ G+AKTGSGKT AY+ PAIVHI +QP ++ G+GP+A+++ PTRELA Q+ Q A F
Sbjct: 303 RDVLGIAKTGSGKTAAYLWPAIVHIMDQPDLKAGEGPVAVIVVPTRELAIQVFQEAKKFC 362
Query: 677 HTSYVRNTCVF 709
+ C +
Sbjct: 363 KVYNINPICAY 373
Score = 60.9 bits (141), Expect = 9e-10
Identities = 30/100 (30%), Positives = 52/100 (52%), Gaps = 4/100 (4%)
Frame = +3
Query: 258 QPFNKNFYDPHPTVLKRSPYEVEEYRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKT 437
Q FNKNFY+ H + + +V +N + V G++ P+ F +F + + ++
Sbjct: 223 QKFNKNFYEEHEDIKRLHYMDVIRLQNTMNLRVGGLKPPRPVCSFAHFSFDKLLMEAIRK 282
Query: 438 MGYKEPTPIQAQGWPIAMSGKNLVA*PK----RVPAKRWP 545
Y++PTPIQA P A+SG++++ K + A WP
Sbjct: 283 SEYEQPTPIQAMAIPSALSGRDVLGIAKTGSGKTAAYLWP 322
>AF045641-1|AAK68386.1| 970|Caenorhabditis elegans Hypothetical
protein F53H1.1 protein.
Length = 970
Score = 77.4 bits (182), Expect = 1e-14
Identities = 35/71 (49%), Positives = 48/71 (67%)
Frame = +2
Query: 497 KEFSGVAKTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 676
++ G+AKTGSGKTLA++LP HI +QP + GDGPIA++LAPTRELA Q + A F
Sbjct: 342 RDVIGIAKTGSGKTLAFLLPMFRHILDQPELEEGDGPIAVILAPTRELAMQTYKEANKFA 401
Query: 677 HTSYVRNTCVF 709
++ C +
Sbjct: 402 KPLGLKVACTY 412
Score = 51.2 bits (117), Expect = 7e-07
Identities = 26/87 (29%), Positives = 46/87 (52%), Gaps = 1/87 (1%)
Frame = +3
Query: 252 FLQPFNKNFYDPHPTVLKRSPYEVEEYRNNHE-VTVSGVEVHNPIQYFEEANFPDYVQQG 428
+ + F KNFY + + + EV+ YR + +TV G++ PI+ + + +
Sbjct: 259 YYRKFKKNFYIETEEIRRMTKAEVKAYREELDSITVKGIDCPKPIKTWAQCGVNLKMMNV 318
Query: 429 VKTMGYKEPTPIQAQGWPIAMSGKNLV 509
+K Y +PT IQAQ P MSG++++
Sbjct: 319 LKKFEYSKPTSIQAQAIPSIMSGRDVI 345
>U13070-1|AAK67224.1| 730|Caenorhabditis elegans Hypothetical
protein F01F1.7 protein.
Length = 730
Score = 64.5 bits (150), Expect = 8e-11
Identities = 32/74 (43%), Positives = 48/74 (64%), Gaps = 4/74 (5%)
Frame = +2
Query: 497 KEFSGVAKTGSGKTLAYILPAIVHINNQPPIRRGD----GPIALVLAPTRELAQQIQQVA 664
++ GVA+TGSGKT A++LP +V I + P + R + GP A+++APTRELAQQI++
Sbjct: 339 RDVIGVAETGSGKTAAFLLPLLVWITSLPKMERQEHRDLGPYAIIMAPTRELAQQIEEET 398
Query: 665 ADFGHTSYVRNTCV 706
FG ++ V
Sbjct: 399 NKFGKLLGIKTVSV 412
Score = 61.3 bits (142), Expect = 7e-10
Identities = 25/60 (41%), Positives = 39/60 (65%)
Frame = +3
Query: 330 YRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLV 509
+R + +++ G V P++ +EEA FPD V Q VK +GY EPTPIQ Q PI + ++++
Sbjct: 283 FREDFNISIKGGRVPRPLRNWEEAGFPDEVYQAVKEIGYLEPTPIQRQAIPIGLQNRDVI 342
>AL034488-3|CAA22456.1| 504|Caenorhabditis elegans Hypothetical
protein Y54G11A.3 protein.
Length = 504
Score = 61.3 bits (142), Expect = 7e-10
Identities = 32/73 (43%), Positives = 48/73 (65%), Gaps = 6/73 (8%)
Frame = +2
Query: 509 GVAKTGSGKTLAYILPAIVHINNQ-PPIRRGD-----GPIALVLAPTRELAQQIQQVAAD 670
GV++TGSGKTLA++LPA++HI+ Q + D P LVL+PTRELAQQI+
Sbjct: 126 GVSQTGSGKTLAFLLPALLHIDAQLAQYEKNDEEQKPSPFVLVLSPTRELAQQIEGEVKK 185
Query: 671 FGHTSYVRNTCVF 709
+ + Y ++ C++
Sbjct: 186 YSYNGY-KSVCLY 197
Score = 42.3 bits (95), Expect = 3e-04
Identities = 26/96 (27%), Positives = 52/96 (54%), Gaps = 8/96 (8%)
Frame = +3
Query: 246 FCFLQPFNKNFYDPHPTVLKRSPYEVEE-YRNNHEVTV------SGVEVHNPIQYFEEAN 404
F +++P ++ Y SP +++E Y N + V S V++ P+ FE+A
Sbjct: 30 FSWMKPIVRDLYKIPNEQKNLSPEQLQELYTNGGVMKVYPFREESTVKIPPPVNSFEQAF 89
Query: 405 FPDYVQQG-VKTMGYKEPTPIQAQGWPIAMSGKNLV 509
+ G ++ G+++P+PIQ+Q WP+ +SG++ +
Sbjct: 90 GSNASIMGEIRKNGFEKPSPIQSQMWPLLLSGQDCI 125
>AC006665-5|AAF39907.1| 630|Caenorhabditis elegans Hypothetical
protein H27M09.1 protein.
Length = 630
Score = 53.6 bits (123), Expect = 1e-07
Identities = 23/55 (41%), Positives = 36/55 (65%), Gaps = 3/55 (5%)
Frame = +2
Query: 497 KEFSGVAKTGSGKTLAYILPAIVHINNQP---PIRRGDGPIALVLAPTRELAQQI 652
++ G+A TGSGKT+ ++LP ++ Q P R +GP L++ P+RELA+QI
Sbjct: 228 RDMIGIASTGSGKTMTFVLPLVMFCLEQEMKLPFMRSEGPFGLIIVPSRELARQI 282
Score = 40.7 bits (91), Expect = 0.001
Identities = 23/76 (30%), Positives = 39/76 (51%), Gaps = 1/76 (1%)
Frame = +3
Query: 285 PHPTVLKRSPYEVEEYRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQGV-KTMGYKEPTP 461
P + ++S + E R ++ G + PI F E FP + + + K G PT
Sbjct: 156 PPGHIRRQSQEDYEIQRKRLGISCEGDHIPPPIGSFLEMKFPKSLLEFMQKQKGIVTPTA 215
Query: 462 IQAQGWPIAMSGKNLV 509
IQ QG P+A+SG++++
Sbjct: 216 IQIQGIPVALSGRDMI 231
>AC024810-3|AAU20831.1| 660|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform c protein.
Length = 660
Score = 52.4 bits (120), Expect = 3e-07
Identities = 33/81 (40%), Positives = 46/81 (56%), Gaps = 10/81 (12%)
Frame = +2
Query: 497 KEFSGVAKTGSGKTLAYILPAIVHINN------QPPI----RRGDGPIALVLAPTRELAQ 646
++ A+TGSGKT A++LP I HI +PP RR P ALVL+PTRELA
Sbjct: 177 RDLMSCAQTGSGKTAAFLLPIIQHILAGGPDMVKPPAFTNGRRTYYPCALVLSPTRELAI 236
Query: 647 QIQQVAADFGHTSYVRNTCVF 709
QI + A F + S ++ ++
Sbjct: 237 QIHKEATKFSYKSNIQTAILY 257
Score = 44.8 bits (101), Expect = 7e-05
Identities = 21/58 (36%), Positives = 32/58 (55%)
Frame = +3
Query: 339 NHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVA 512
N V VSG V I++F EA F V + V GY +PTP+Q P ++ ++L++
Sbjct: 124 NIPVEVSGDSVPAAIEHFNEAGFGPAVMENVNRSGYSKPTPVQKHSIPTLLANRDLMS 181
>AC024810-2|AAK68520.1| 644|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform b protein.
Length = 644
Score = 52.4 bits (120), Expect = 3e-07
Identities = 33/81 (40%), Positives = 46/81 (56%), Gaps = 10/81 (12%)
Frame = +2
Query: 497 KEFSGVAKTGSGKTLAYILPAIVHINN------QPPI----RRGDGPIALVLAPTRELAQ 646
++ A+TGSGKT A++LP I HI +PP RR P ALVL+PTRELA
Sbjct: 161 RDLMSCAQTGSGKTAAFLLPIIQHILAGGPDMVKPPAFTNGRRTYYPCALVLSPTRELAI 220
Query: 647 QIQQVAADFGHTSYVRNTCVF 709
QI + A F + S ++ ++
Sbjct: 221 QIHKEATKFSYKSNIQTAILY 241
Score = 44.8 bits (101), Expect = 7e-05
Identities = 21/58 (36%), Positives = 32/58 (55%)
Frame = +3
Query: 339 NHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVA 512
N V VSG V I++F EA F V + V GY +PTP+Q P ++ ++L++
Sbjct: 108 NIPVEVSGDSVPAAIEHFNEAGFGPAVMENVNRSGYSKPTPVQKHSIPTLLANRDLMS 165
>AC024810-1|AAF60764.1| 641|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform a protein.
Length = 641
Score = 52.4 bits (120), Expect = 3e-07
Identities = 33/81 (40%), Positives = 46/81 (56%), Gaps = 10/81 (12%)
Frame = +2
Query: 497 KEFSGVAKTGSGKTLAYILPAIVHINN------QPPI----RRGDGPIALVLAPTRELAQ 646
++ A+TGSGKT A++LP I HI +PP RR P ALVL+PTRELA
Sbjct: 158 RDLMSCAQTGSGKTAAFLLPIIQHILAGGPDMVKPPAFTNGRRTYYPCALVLSPTRELAI 217
Query: 647 QIQQVAADFGHTSYVRNTCVF 709
QI + A F + S ++ ++
Sbjct: 218 QIHKEATKFSYKSNIQTAILY 238
Score = 44.8 bits (101), Expect = 7e-05
Identities = 21/58 (36%), Positives = 32/58 (55%)
Frame = +3
Query: 339 NHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVA 512
N V VSG V I++F EA F V + V GY +PTP+Q P ++ ++L++
Sbjct: 105 NIPVEVSGDSVPAAIEHFNEAGFGPAVMENVNRSGYSKPTPVQKHSIPTLLANRDLMS 162
>Z81094-7|CAB03153.2| 960|Caenorhabditis elegans Hypothetical
protein F58G11.2 protein.
Length = 960
Score = 48.4 bits (110), Expect = 5e-06
Identities = 27/55 (49%), Positives = 35/55 (63%), Gaps = 5/55 (9%)
Frame = +2
Query: 509 GVAKTGSGKTLAYILPAIVHI-----NNQPPIRRGDGPIALVLAPTRELAQQIQQ 658
G A+T +GKT A+ LP I I + R+ DGP+AL+LAPTRELA QI +
Sbjct: 423 GQAETSAGKTAAFGLPIIDKILRMDEETRNKARQDDGPLALILAPTRELAAQIHE 477
>AC024859-14|AAY43989.1| 643|Caenorhabditis elegans Hypothetical
protein Y71H2AM.19 protein.
Length = 643
Score = 46.0 bits (104), Expect = 3e-05
Identities = 17/55 (30%), Positives = 32/55 (58%)
Frame = +3
Query: 348 VTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVA 512
V +G +V PI F + + +++++ +KT GY PTP+Q P G++L++
Sbjct: 154 VEATGDDVPQPISLFSDLSLHEWIEENIKTAGYDRPTPVQKYSIPALQGGRDLMS 208
Score = 38.7 bits (86), Expect = 0.004
Identities = 25/82 (30%), Positives = 42/82 (51%), Gaps = 11/82 (13%)
Frame = +2
Query: 497 KEFSGVAKTGSGKTLAYILPAIVHINNQPPI-----------RRGDGPIALVLAPTRELA 643
++ A+TGSGKT A+++P + I P R+ P ALVL+PTREL+
Sbjct: 204 RDLMSCAQTGSGKTAAFLVPLVNAILQDGPDAVHRSVTSSGGRKKQYPSALVLSPTRELS 263
Query: 644 QQIQQVAADFGHTSYVRNTCVF 709
QI + F + + + + ++
Sbjct: 264 LQIFNESRKFAYRTPITSALLY 285
>AF025451-3|AAB71200.2| 634|Caenorhabditis elegans Hypothetical
protein C24H12.4a protein.
Length = 634
Score = 45.2 bits (102), Expect = 5e-05
Identities = 22/56 (39%), Positives = 35/56 (62%), Gaps = 1/56 (1%)
Frame = +2
Query: 497 KEFSGVAKTGSGKTLAYILPAIVHINNQPPIRRGD-GPIALVLAPTRELAQQIQQV 661
K G A+TGSGKT A+++P + + + G GP A+++APT+EL QI ++
Sbjct: 127 KNIMGRARTGSGKTGAFLIPLVQKLIAESKTNDGSVGPSAVIIAPTKELITQIYKL 182
>AC024876-4|AAU05555.1| 825|Caenorhabditis elegans Hypothetical
protein Y94H6A.5a protein.
Length = 825
Score = 44.8 bits (101), Expect = 7e-05
Identities = 24/70 (34%), Positives = 41/70 (58%)
Frame = +2
Query: 497 KEFSGVAKTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 676
K+ +++TGSGKT A+++P + + R G AL+++PTRELA Q +V + G
Sbjct: 62 KDVVAMSRTGSGKTAAFVIPMLQKLKR----RDTTGIRALMVSPTRELALQTFKVVKELG 117
Query: 677 HTSYVRNTCV 706
+ +R C+
Sbjct: 118 RFTGLRCACL 127
Score = 33.1 bits (72), Expect = 0.21
Identities = 14/47 (29%), Positives = 25/47 (53%)
Frame = +3
Query: 372 HNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVA 512
H +++ V + ++ G+ +PTPIQ + P M GK++VA
Sbjct: 20 HKKAGGWQQIGLDHSVYKAIEKKGFNQPTPIQRKTIPCIMDGKDVVA 66
>AC024876-3|AAU05556.1| 871|Caenorhabditis elegans Hypothetical
protein Y94H6A.5b protein.
Length = 871
Score = 44.8 bits (101), Expect = 7e-05
Identities = 24/70 (34%), Positives = 41/70 (58%)
Frame = +2
Query: 497 KEFSGVAKTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 676
K+ +++TGSGKT A+++P + + R G AL+++PTRELA Q +V + G
Sbjct: 62 KDVVAMSRTGSGKTAAFVIPMLQKLKR----RDTTGIRALMVSPTRELALQTFKVVKELG 117
Query: 677 HTSYVRNTCV 706
+ +R C+
Sbjct: 118 RFTGLRCACL 127
Score = 33.1 bits (72), Expect = 0.21
Identities = 14/47 (29%), Positives = 25/47 (53%)
Frame = +3
Query: 372 HNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVA 512
H +++ V + ++ G+ +PTPIQ + P M GK++VA
Sbjct: 20 HKKAGGWQQIGLDHSVYKAIEKKGFNQPTPIQRKTIPCIMDGKDVVA 66
>Z12116-1|CAA78102.1| 402|Caenorhabditis elegans protein (
C.elegans mRNA for eIF-4A homologue. ).
Length = 402
Score = 44.4 bits (100), Expect = 9e-05
Identities = 26/79 (32%), Positives = 43/79 (54%)
Frame = +2
Query: 440 GLQRTDAHSSSRLADSYVWKEFSGVAKTGSGKTLAYILPAIVHINNQPPIRRGDGPIALV 619
G ++ A + K+ A++G+GKT + + + I+++ P + ALV
Sbjct: 48 GFEKPSAIQKRAIVPCTTGKDVIAQAQSGTGKTATFSVSILQRIDHEDPHVQ-----ALV 102
Query: 620 LAPTRELAQQIQQVAADFG 676
+APTRELAQQIQ+V + G
Sbjct: 103 MAPTRELAQQIQKVMSALG 121
>U13876-3|AAA21170.1| 402|Caenorhabditis elegans Initiation factor
protein 1, isoforma protein.
Length = 402
Score = 44.4 bits (100), Expect = 9e-05
Identities = 26/79 (32%), Positives = 43/79 (54%)
Frame = +2
Query: 440 GLQRTDAHSSSRLADSYVWKEFSGVAKTGSGKTLAYILPAIVHINNQPPIRRGDGPIALV 619
G ++ A + K+ A++G+GKT + + + I+++ P + ALV
Sbjct: 48 GFEKPSAIQKRAIVPCTTGKDVIAQAQSGTGKTATFSVSILQRIDHEDPHVQ-----ALV 102
Query: 620 LAPTRELAQQIQQVAADFG 676
+APTRELAQQIQ+V + G
Sbjct: 103 MAPTRELAQQIQKVMSALG 121
>AF067608-1|AAC17654.2| 544|Caenorhabditis elegans Hypothetical
protein B0511.6 protein.
Length = 544
Score = 44.4 bits (100), Expect = 9e-05
Identities = 23/58 (39%), Positives = 39/58 (67%)
Frame = +2
Query: 497 KEFSGVAKTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAAD 670
K+ AKTGSGKTLA++LPAI + ++ ++ +G ++++PTREL+ Q V ++
Sbjct: 106 KDVLASAKTGSGKTLAFLLPAI-ELLHKLNWKQHNGTGVIIVSPTRELSMQTYGVLSE 162
>AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA
helicase-3 protein.
Length = 720
Score = 44.0 bits (99), Expect = 1e-04
Identities = 25/67 (37%), Positives = 37/67 (55%), Gaps = 4/67 (5%)
Frame = +2
Query: 497 KEFSGVAKTGSGKTLAYILPAIVHINNQPPIRRG-DG---PIALVLAPTRELAQQIQQVA 664
K+ A+TGSGKT A++LP + + + + G +G P ++L PTRELA QI
Sbjct: 336 KDILACAQTGSGKTAAFLLPIMSRLILEKDLNYGAEGGCYPRCIILTPTRELADQIYNEG 395
Query: 665 ADFGHTS 685
F + S
Sbjct: 396 RKFSYQS 402
Score = 35.9 bits (79), Expect = 0.030
Identities = 14/45 (31%), Positives = 26/45 (57%)
Frame = +3
Query: 378 PIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVA 512
P + F +++ P +++ V+ GY TPIQ P+ GK+++A
Sbjct: 296 PCKSFSDSDIPQSMRRNVERAGYTRTTPIQQYTLPLVADGKDILA 340
>AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line
helicase protein 3 protein.
Length = 720
Score = 44.0 bits (99), Expect = 1e-04
Identities = 25/67 (37%), Positives = 37/67 (55%), Gaps = 4/67 (5%)
Frame = +2
Query: 497 KEFSGVAKTGSGKTLAYILPAIVHINNQPPIRRG-DG---PIALVLAPTRELAQQIQQVA 664
K+ A+TGSGKT A++LP + + + + G +G P ++L PTRELA QI
Sbjct: 336 KDILACAQTGSGKTAAFLLPIMSRLILEKDLNYGAEGGCYPRCIILTPTRELADQIYNEG 395
Query: 665 ADFGHTS 685
F + S
Sbjct: 396 RKFSYQS 402
Score = 35.9 bits (79), Expect = 0.030
Identities = 14/45 (31%), Positives = 26/45 (57%)
Frame = +3
Query: 378 PIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVA 512
P + F +++ P +++ V+ GY TPIQ P+ GK+++A
Sbjct: 296 PCKSFSDSDIPQSMRRNVERAGYTRTTPIQQYTLPLVADGKDILA 340
>Z29115-1|CAA82362.1| 489|Caenorhabditis elegans Hypothetical
protein T26G10.1 protein.
Length = 489
Score = 42.7 bits (96), Expect = 3e-04
Identities = 27/77 (35%), Positives = 39/77 (50%)
Frame = +2
Query: 428 CKDNGLQRTDAHSSSRLADSYVWKEFSGVAKTGSGKTLAYILPAIVHINNQPPIRRGDGP 607
C+ G + + L + K+ G+A+TGSGKT A+ +P + + + P
Sbjct: 59 CQRLGWMKPSKIQQAALPHALQGKDVIGLAETGSGKTGAFAIPVLQSLLDHP-----QAF 113
Query: 608 IALVLAPTRELAQQIQQ 658
LVL PTRELA QI Q
Sbjct: 114 FCLVLTPTRELAFQIGQ 130
>AC024753-1|AAF60456.1| 732|Caenorhabditis elegans Hypothetical
protein Y23H5B.6 protein.
Length = 732
Score = 42.7 bits (96), Expect = 3e-04
Identities = 27/73 (36%), Positives = 38/73 (52%)
Frame = +2
Query: 431 KDNGLQRTDAHSSSRLADSYVWKEFSGVAKTGSGKTLAYILPAIVHINNQPPIRRGDGPI 610
KDN + +A S + G AKTGSGKTLA ++P ++ + G
Sbjct: 92 KDNDYTKPTEIQRDTIAYSLTGSDVVGAAKTGSGKTLALVIP-VLEALWRAKWSPDYGLG 150
Query: 611 ALVLAPTRELAQQ 649
AL+++PTRELA Q
Sbjct: 151 ALIISPTRELALQ 163
>U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 42.3 bits (95), Expect = 3e-04
Identities = 23/59 (38%), Positives = 34/59 (57%), Gaps = 4/59 (6%)
Frame = +2
Query: 515 AKTGSGKTLAYILPAIVHINNQPPIR-RGDG---PIALVLAPTRELAQQIQQVAADFGH 679
A+TGSGKT A++LP + + + + G+G P ++L PTRELA QI F +
Sbjct: 385 AQTGSGKTAAFLLPIMTRLIDDNNLNTAGEGGCYPRCIILTPTRELADQIYNEGRKFAY 443
Score = 36.3 bits (80), Expect = 0.023
Identities = 16/45 (35%), Positives = 25/45 (55%)
Frame = +3
Query: 378 PIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVA 512
P + F EAN + +Q+ V GY + TPIQ P+ G +++A
Sbjct: 339 PCKTFAEANLTETMQKNVAHAGYSKTTPIQQYALPLVHQGYDIMA 383
>L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 42.3 bits (95), Expect = 3e-04
Identities = 23/59 (38%), Positives = 34/59 (57%), Gaps = 4/59 (6%)
Frame = +2
Query: 515 AKTGSGKTLAYILPAIVHINNQPPIR-RGDG---PIALVLAPTRELAQQIQQVAADFGH 679
A+TGSGKT A++LP + + + + G+G P ++L PTRELA QI F +
Sbjct: 385 AQTGSGKTAAFLLPIMTRLIDDNNLNTAGEGGCYPRCIILTPTRELADQIYNEGRKFAY 443
Score = 36.3 bits (80), Expect = 0.023
Identities = 16/45 (35%), Positives = 25/45 (55%)
Frame = +3
Query: 378 PIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVA 512
P + F EAN + +Q+ V GY + TPIQ P+ G +++A
Sbjct: 339 PCKTFAEANLTETMQKNVAHAGYSKTTPIQQYALPLVHQGYDIMA 383
>AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line
helicase protein 1 protein.
Length = 763
Score = 42.3 bits (95), Expect = 3e-04
Identities = 23/59 (38%), Positives = 34/59 (57%), Gaps = 4/59 (6%)
Frame = +2
Query: 515 AKTGSGKTLAYILPAIVHINNQPPIR-RGDG---PIALVLAPTRELAQQIQQVAADFGH 679
A+TGSGKT A++LP + + + + G+G P ++L PTRELA QI F +
Sbjct: 385 AQTGSGKTAAFLLPIMTRLIDDNNLNTAGEGGCYPRCIILTPTRELADQIYNEGRKFAY 443
Score = 36.3 bits (80), Expect = 0.023
Identities = 16/45 (35%), Positives = 25/45 (55%)
Frame = +3
Query: 378 PIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVA 512
P + F EAN + +Q+ V GY + TPIQ P+ G +++A
Sbjct: 339 PCKTFAEANLTETMQKNVAHAGYSKTTPIQQYALPLVHQGYDIMA 383
>AC006661-5|AAF39890.2| 488|Caenorhabditis elegans Hypothetical
protein H20J04.4a protein.
Length = 488
Score = 42.3 bits (95), Expect = 3e-04
Identities = 23/50 (46%), Positives = 32/50 (64%)
Frame = +2
Query: 509 GVAKTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQ 658
G A+TG+GKTLA+ +P + ++ P G AL+L PTRELA QI +
Sbjct: 131 GCARTGTGKTLAFAIPILQKLSVDP-----YGIYALILTPTRELAFQIAE 175
>AC006661-4|ABB88208.1| 561|Caenorhabditis elegans Hypothetical
protein H20J04.4b protein.
Length = 561
Score = 42.3 bits (95), Expect = 3e-04
Identities = 23/50 (46%), Positives = 32/50 (64%)
Frame = +2
Query: 509 GVAKTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQ 658
G A+TG+GKTLA+ +P + ++ P G AL+L PTRELA QI +
Sbjct: 131 GCARTGTGKTLAFAIPILQKLSVDP-----YGIYALILTPTRELAFQIAE 175
>U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein.
Length = 974
Score = 41.9 bits (94), Expect = 5e-04
Identities = 22/59 (37%), Positives = 34/59 (57%), Gaps = 4/59 (6%)
Frame = +2
Query: 515 AKTGSGKTLAYILPAIVHINNQPPIR-RGDG---PIALVLAPTRELAQQIQQVAADFGH 679
A+TGSGKT A++LP + + ++ + G+G P ++L PTREL QI F +
Sbjct: 596 AQTGSGKTAAFLLPIMARLIDENDLNTAGEGGCYPRCIILTPTRELTDQIYNEGRKFAY 654
Score = 31.5 bits (68), Expect = 0.65
Identities = 14/41 (34%), Positives = 23/41 (56%)
Frame = +3
Query: 390 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVA 512
F EAN + +++ V GY + TPIQ P+ G +++A
Sbjct: 554 FSEANLGETMKKNVAHAGYTKTTPIQQYTLPLIHQGHDIMA 594
>U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GLH-2
protein.
Length = 974
Score = 41.9 bits (94), Expect = 5e-04
Identities = 22/59 (37%), Positives = 34/59 (57%), Gaps = 4/59 (6%)
Frame = +2
Query: 515 AKTGSGKTLAYILPAIVHINNQPPIR-RGDG---PIALVLAPTRELAQQIQQVAADFGH 679
A+TGSGKT A++LP + + ++ + G+G P ++L PTREL QI F +
Sbjct: 596 AQTGSGKTAAFLLPIMARLIDENDLNTAGEGGCYPRCIILTPTRELTDQIYNEGRKFAY 654
Score = 31.5 bits (68), Expect = 0.65
Identities = 14/41 (34%), Positives = 23/41 (56%)
Frame = +3
Query: 390 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVA 512
F EAN + +++ V GY + TPIQ P+ G +++A
Sbjct: 554 FSEANLGETMKKNVAHAGYTKTTPIQQYTLPLIHQGHDIMA 594
>AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line
helicase protein 2 protein.
Length = 974
Score = 41.9 bits (94), Expect = 5e-04
Identities = 22/59 (37%), Positives = 34/59 (57%), Gaps = 4/59 (6%)
Frame = +2
Query: 515 AKTGSGKTLAYILPAIVHINNQPPIR-RGDG---PIALVLAPTRELAQQIQQVAADFGH 679
A+TGSGKT A++LP + + ++ + G+G P ++L PTREL QI F +
Sbjct: 596 AQTGSGKTAAFLLPIMARLIDENDLNTAGEGGCYPRCIILTPTRELTDQIYNEGRKFAY 654
Score = 31.5 bits (68), Expect = 0.65
Identities = 14/41 (34%), Positives = 23/41 (56%)
Frame = +3
Query: 390 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVA 512
F EAN + +++ V GY + TPIQ P+ G +++A
Sbjct: 554 FSEANLGETMKKNVAHAGYTKTTPIQQYTLPLIHQGHDIMA 594
>U80447-2|AAO38637.1| 579|Caenorhabditis elegans Hypothetical
protein F55F8.2b protein.
Length = 579
Score = 41.5 bits (93), Expect = 6e-04
Identities = 23/56 (41%), Positives = 33/56 (58%), Gaps = 6/56 (10%)
Frame = +2
Query: 509 GVAKTGSGKTLAYILPAIVHI------NNQPPIRRGDGPIALVLAPTRELAQQIQQ 658
G A+TGSGKTLA+ +P + + + + GP AL++APTREL QI +
Sbjct: 31 GAAETGSGKTLAFGIPLVARLLESSDDSQETESTEVRGPRALIVAPTRELVIQIMK 86
>U80447-1|AAB37806.1| 746|Caenorhabditis elegans Hypothetical
protein F55F8.2a protein.
Length = 746
Score = 41.5 bits (93), Expect = 6e-04
Identities = 23/56 (41%), Positives = 33/56 (58%), Gaps = 6/56 (10%)
Frame = +2
Query: 509 GVAKTGSGKTLAYILPAIVHI------NNQPPIRRGDGPIALVLAPTRELAQQIQQ 658
G A+TGSGKTLA+ +P + + + + GP AL++APTREL QI +
Sbjct: 198 GAAETGSGKTLAFGIPLVARLLESSDDSQETESTEVRGPRALIVAPTRELVIQIMK 253
>AC025726-23|AAK73934.1| 763|Caenorhabditis elegans Hypothetical
protein Y71G12B.8 protein.
Length = 763
Score = 41.1 bits (92), Expect = 8e-04
Identities = 23/55 (41%), Positives = 32/55 (58%)
Frame = +2
Query: 497 KEFSGVAKTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQV 661
K+ A TG+GKT A++LP + + +P + LVL PTRELA Q+ QV
Sbjct: 186 KDICACAATGTGKTAAFVLPILERMIYRP--KGASCTRVLVLVPTRELAIQVFQV 238
Score = 36.7 bits (81), Expect = 0.017
Identities = 15/41 (36%), Positives = 24/41 (58%)
Frame = +3
Query: 390 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVA 512
FE+ N + + GY +PTPIQ P+A++GK++ A
Sbjct: 150 FEQMNLSRQILKACSGAGYSDPTPIQQACIPVALTGKDICA 190
>Z22177-1|CAA80151.1| 578|Caenorhabditis elegans Hypothetical
protein ZK512.2 protein.
Length = 578
Score = 40.7 bits (91), Expect = 0.001
Identities = 24/51 (47%), Positives = 30/51 (58%)
Frame = +2
Query: 521 TGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADF 673
TGSGKTLA++LP + I N G AL+L+P+REL QI V F
Sbjct: 55 TGSGKTLAFVLPMMRMIQNAKLQPADIG--ALILSPSRELCSQIVSVIQPF 103
>AC006605-1|AAK85443.1| 430|Caenorhabditis elegans Conserved
germline helicase protein1 protein.
Length = 430
Score = 39.5 bits (88), Expect = 0.002
Identities = 23/52 (44%), Positives = 31/52 (59%)
Frame = +2
Query: 515 AKTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAAD 670
AK G+GKT AY +P I I QP ++ A+V+ PTRELA Q Q+ +
Sbjct: 87 AKNGTGKTGAYCIPVIEKI--QPALKAIQ---AMVIVPTRELALQTSQICVE 133
>AF039720-12|AAB96704.1| 399|Caenorhabditis elegans Hypothetical
protein F33D11.10 protein.
Length = 399
Score = 37.1 bits (82), Expect = 0.013
Identities = 23/65 (35%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Frame = +2
Query: 515 AKTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVR 694
A++G+GKT + + + ++ Q +R AL+L+PTRELA QIQ+V G V+
Sbjct: 70 AQSGTGKTATFSISVLQSLDTQ--VRETQ---ALILSPTRELAVQIQKVVLALGDYMNVQ 124
Query: 695 -NTCV 706
+ C+
Sbjct: 125 CHACI 129
>AC024844-2|AAK29954.2| 399|Caenorhabditis elegans Hypothetical
protein Y65B4A.6 protein.
Length = 399
Score = 37.1 bits (82), Expect = 0.013
Identities = 23/65 (35%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Frame = +2
Query: 515 AKTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVR 694
A++G+GKT + + + ++ Q +R AL+L+PTRELA QIQ+V G V+
Sbjct: 70 AQSGTGKTATFSISVLQSLDTQ--VRETQ---ALILSPTRELAVQIQKVVLALGDYMNVQ 124
Query: 695 -NTCV 706
+ C+
Sbjct: 125 CHACI 129
>AF079508-1|AAC28387.1| 1156|Caenorhabditis elegans germline RNA
helicase-4 protein.
Length = 1156
Score = 36.7 bits (81), Expect = 0.017
Identities = 19/50 (38%), Positives = 29/50 (58%), Gaps = 5/50 (10%)
Frame = +2
Query: 515 AKTGSGKTLAYILPAIVHI-----NNQPPIRRGDGPIALVLAPTRELAQQ 649
A TGSGKTLA+++P ++ + ++ P L++APTREL Q
Sbjct: 780 AHTGSGKTLAFLIPFVIKLMEEFEKDRDVTDEKPSPRLLIVAPTRELVNQ 829
>AF039718-2|AAB96745.2| 1156|Caenorhabditis elegans Germ-line
helicase protein 4 protein.
Length = 1156
Score = 36.7 bits (81), Expect = 0.017
Identities = 19/50 (38%), Positives = 29/50 (58%), Gaps = 5/50 (10%)
Frame = +2
Query: 515 AKTGSGKTLAYILPAIVHI-----NNQPPIRRGDGPIALVLAPTRELAQQ 649
A TGSGKTLA+++P ++ + ++ P L++APTREL Q
Sbjct: 780 AHTGSGKTLAFLIPFVIKLMEEFEKDRDVTDEKPSPRLLIVAPTRELVNQ 829
>Z75546-3|CAA99891.1| 581|Caenorhabditis elegans Hypothetical
protein R05D11.4 protein.
Length = 581
Score = 35.5 bits (78), Expect = 0.040
Identities = 22/50 (44%), Positives = 29/50 (58%), Gaps = 5/50 (10%)
Frame = +2
Query: 515 AKTGSGKTLAYILPA---IVHINNQPPIRRGDGP--IALVLAPTRELAQQ 649
A TGSGKTLA+ LP I+ + + + +A+VL PTRELA Q
Sbjct: 170 APTGSGKTLAFALPVIDEILELKQRADYSSSNSSKLLAVVLEPTRELAAQ 219
>Z50071-3|CAA90407.1| 613|Caenorhabditis elegans Hypothetical
protein T07D4.4c protein.
Length = 613
Score = 33.1 bits (72), Expect = 0.21
Identities = 20/54 (37%), Positives = 30/54 (55%)
Frame = +2
Query: 515 AKTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 676
A++G+GKT A++L + I+ P + LAPT ELA+QI +V G
Sbjct: 255 AQSGTGKTAAFVLTMLCRIDVNLMC-----PQCICLAPTLELAKQIGEVVEKMG 303
>Z50071-2|CAA90406.1| 638|Caenorhabditis elegans Hypothetical
protein T07D4.4b protein.
Length = 638
Score = 33.1 bits (72), Expect = 0.21
Identities = 20/54 (37%), Positives = 30/54 (55%)
Frame = +2
Query: 515 AKTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 676
A++G+GKT A++L + I+ P + LAPT ELA+QI +V G
Sbjct: 280 AQSGTGKTAAFVLTMLCRIDVNLMC-----PQCICLAPTLELAKQIGEVVEKMG 328
>Z50071-1|CAA90408.1| 1022|Caenorhabditis elegans Hypothetical
protein T07D4.4a protein.
Length = 1022
Score = 33.1 bits (72), Expect = 0.21
Identities = 20/54 (37%), Positives = 30/54 (55%)
Frame = +2
Query: 515 AKTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 676
A++G+GKT A++L + I+ P + LAPT ELA+QI +V G
Sbjct: 664 AQSGTGKTAAFVLTMLCRIDVNLMC-----PQCICLAPTLELAKQIGEVVEKMG 712
>L17337-1|AAP68928.1| 593|Caenorhabditis elegans Hypothetical
protein ZK686.2 protein.
Length = 593
Score = 33.1 bits (72), Expect = 0.21
Identities = 17/46 (36%), Positives = 26/46 (56%)
Frame = +2
Query: 515 AKTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQI 652
A TGSGKT+ Y+LP + + ++P A++L P + L QI
Sbjct: 163 APTGSGKTICYVLPVLAAVGSKP----SKILQAVILVPVQTLVAQI 204
>AF125963-6|AAK95885.1| 520|Caenorhabditis elegans Hypothetical
protein Y38A10A.6 protein.
Length = 520
Score = 32.7 bits (71), Expect = 0.28
Identities = 19/50 (38%), Positives = 28/50 (56%), Gaps = 4/50 (8%)
Frame = +2
Query: 515 AKTGSGKTLAYILPAI-VHINNQP---PIRRGDGPIALVLAPTRELAQQI 652
A TG GKT A+++PAI + + +P I P L+LA T L +Q+
Sbjct: 136 APTGIGKTYAFLIPAIEIALRERPLLTNISTTPSPTILILANTNSLVEQL 185
>U13876-12|AAA21169.1| 363|Caenorhabditis elegans Hypothetical
protein F57B9.3 protein.
Length = 363
Score = 30.7 bits (66), Expect = 1.1
Identities = 21/89 (23%), Positives = 41/89 (46%)
Frame = +2
Query: 440 GLQRTDAHSSSRLADSYVWKEFSGVAKTGSGKTLAYILPAIVHINNQPPIRRGDGPIALV 619
G ++ A S +A K+ + ++ GSGKT+ ++ + I+ + + ++
Sbjct: 15 GFEKPSAIQKSAVAPCTTGKDVTIQSQAGSGKTVISLIDILQGIDCEDAHLQ-----VIL 69
Query: 620 LAPTRELAQQIQQVAADFGHTSYVRNTCV 706
LAP R +AQ+ + G V TC+
Sbjct: 70 LAPQRGMAQRAHEQLKSLGRNLNVNATCL 98
>EU051652-1|ABS85191.1| 973|Caenorhabditis elegans MEL-46 protein.
Length = 973
Score = 29.9 bits (64), Expect = 2.0
Identities = 18/78 (23%), Positives = 41/78 (52%)
Frame = +2
Query: 425 RCKDNGLQRTDAHSSSRLADSYVWKEFSGVAKTGSGKTLAYILPAIVHINNQPPIRRGDG 604
R K++ R + + + ++ AK+G+GKTL + + A+ ++++ R
Sbjct: 36 RLKNSQFDRPSPVQARAIPVGLLGRDMLVQAKSGTGKTLVFSVLAVENLDS-----RSSH 90
Query: 605 PIALVLAPTRELAQQIQQ 658
+++ PTRE++ QI++
Sbjct: 91 IQKVIVTPTREISVQIKE 108
>CU457744-1|CAM36366.2| 973|Caenorhabditis elegans Hypothetical
protein T06A10.1 protein.
Length = 973
Score = 29.9 bits (64), Expect = 2.0
Identities = 18/78 (23%), Positives = 41/78 (52%)
Frame = +2
Query: 425 RCKDNGLQRTDAHSSSRLADSYVWKEFSGVAKTGSGKTLAYILPAIVHINNQPPIRRGDG 604
R K++ R + + + ++ AK+G+GKTL + + A+ ++++ R
Sbjct: 36 RLKNSQFDRPSPVQARAIPVGLLGRDMLVQAKSGTGKTLVFSVLAVENLDS-----RSSH 90
Query: 605 PIALVLAPTRELAQQIQQ 658
+++ PTRE++ QI++
Sbjct: 91 IQKVIVTPTREISVQIKE 108
>AC091124-2|AAK27879.2| 1114|Caenorhabditis elegans Hypothetical
protein Y47A7.1 protein.
Length = 1114
Score = 29.9 bits (64), Expect = 2.0
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = +3
Query: 6 PASERIHSLNKHLQLNPKNNHVW 74
PAS ++H L++ LQLN N+ W
Sbjct: 773 PASHQLHCLSRALQLNKANDSAW 795
>Z38112-4|CAA86232.1| 809|Caenorhabditis elegans Hypothetical
protein E03A3.2 protein.
Length = 809
Score = 29.1 bits (62), Expect = 3.5
Identities = 11/16 (68%), Positives = 14/16 (87%)
Frame = +2
Query: 521 TGSGKTLAYILPAIVH 568
TG+GK+L Y LPA+VH
Sbjct: 203 TGAGKSLCYQLPAVVH 218
>Z68220-9|CAL64002.1| 312|Caenorhabditis elegans Hypothetical
protein T20D3.5b protein.
Length = 312
Score = 28.7 bits (61), Expect = 4.6
Identities = 11/24 (45%), Positives = 17/24 (70%)
Frame = -1
Query: 147 RRIIAEFVASSKFGTTVSTAIIPV 76
+++I +FVA S G T+STA P+
Sbjct: 220 QQLIGDFVAGSLLGATISTAFFPL 243
>Z68220-8|CAA92487.1| 221|Caenorhabditis elegans Hypothetical
protein T20D3.5a protein.
Length = 221
Score = 28.7 bits (61), Expect = 4.6
Identities = 11/24 (45%), Positives = 17/24 (70%)
Frame = -1
Query: 147 RRIIAEFVASSKFGTTVSTAIIPV 76
+++I +FVA S G T+STA P+
Sbjct: 129 QQLIGDFVAGSLLGATISTAFFPL 152
>U93847-1|AAB58269.1| 760|Caenorhabditis elegans elongation
factor-2 kinase EFK-1B isoform protein.
Length = 760
Score = 28.7 bits (61), Expect = 4.6
Identities = 19/86 (22%), Positives = 36/86 (41%)
Frame = -1
Query: 264 KVGGNRIPIWATHVLTSREFFFPTKSSRSSKSIATVAKSRRIIAEFVASSKFGTTVSTAI 85
++G ++ H + + P + + KSI + E S G T ++
Sbjct: 639 EMGDKGAMLYMAHAYETGQHLGPNRRTDYKKSIDWYQRVVGFQEEEELDSDCGKTTFSSF 698
Query: 84 IPVTRHDYFSDLVEDVYLNYGFFLTQ 7
P+TRH+ + + E +Y G+ L Q
Sbjct: 699 APLTRHEILAKMAE-MYKEGGYGLNQ 723
>U93846-1|AAB58268.1| 768|Caenorhabditis elegans elongation
factor-2 kinase EFK-1A isoform protein.
Length = 768
Score = 28.7 bits (61), Expect = 4.6
Identities = 19/86 (22%), Positives = 36/86 (41%)
Frame = -1
Query: 264 KVGGNRIPIWATHVLTSREFFFPTKSSRSSKSIATVAKSRRIIAEFVASSKFGTTVSTAI 85
++G ++ H + + P + + KSI + E S G T ++
Sbjct: 647 EMGDKGAMLYMAHAYETGQHLGPNRRTDYKKSIDWYQRVVGFQEEEELDSDCGKTTFSSF 706
Query: 84 IPVTRHDYFSDLVEDVYLNYGFFLTQ 7
P+TRH+ + + E +Y G+ L Q
Sbjct: 707 APLTRHEILAKMAE-MYKEGGYGLNQ 731
>U10414-7|AAN63383.1| 768|Caenorhabditis elegans Elongation factor
kinase protein1, isoform a protein.
Length = 768
Score = 28.7 bits (61), Expect = 4.6
Identities = 19/86 (22%), Positives = 36/86 (41%)
Frame = -1
Query: 264 KVGGNRIPIWATHVLTSREFFFPTKSSRSSKSIATVAKSRRIIAEFVASSKFGTTVSTAI 85
++G ++ H + + P + + KSI + E S G T ++
Sbjct: 647 EMGDKGAMLYMAHAYETGQHLGPNRRTDYKKSIDWYQRVVGFQEEEELDSDCGKTTFSSF 706
Query: 84 IPVTRHDYFSDLVEDVYLNYGFFLTQ 7
P+TRH+ + + E +Y G+ L Q
Sbjct: 707 APLTRHEILAKMAE-MYKEGGYGLNQ 731
>U10414-6|AAN63384.1| 760|Caenorhabditis elegans Elongation factor
kinase protein1, isoform b protein.
Length = 760
Score = 28.7 bits (61), Expect = 4.6
Identities = 19/86 (22%), Positives = 36/86 (41%)
Frame = -1
Query: 264 KVGGNRIPIWATHVLTSREFFFPTKSSRSSKSIATVAKSRRIIAEFVASSKFGTTVSTAI 85
++G ++ H + + P + + KSI + E S G T ++
Sbjct: 639 EMGDKGAMLYMAHAYETGQHLGPNRRTDYKKSIDWYQRVVGFQEEEELDSDCGKTTFSSF 698
Query: 84 IPVTRHDYFSDLVEDVYLNYGFFLTQ 7
P+TRH+ + + E +Y G+ L Q
Sbjct: 699 APLTRHEILAKMAE-MYKEGGYGLNQ 723
>AC006714-20|AAK29723.2| 281|Caenorhabditis elegans Serpentine
receptor, class z protein9 protein.
Length = 281
Score = 28.7 bits (61), Expect = 4.6
Identities = 14/61 (22%), Positives = 32/61 (52%)
Frame = -2
Query: 503 ILSRHSYRPALSLNGRRFFVTHCLYTLLHIIRKICFFKVLNRIMNLNATYSYLVIISVLF 324
++ R +YR N + + + Y + +I + F + + ++NLN T +L I+++F
Sbjct: 26 LVYRKAYRFNSERNTATYPIVNSFYKKVALINALYFIESILIVVNLNVTNEWLNKIAIIF 85
Query: 323 D 321
+
Sbjct: 86 N 86
>AC006714-16|AAK29721.3| 281|Caenorhabditis elegans Serpentine
receptor, class z protein8 protein.
Length = 281
Score = 28.7 bits (61), Expect = 4.6
Identities = 14/61 (22%), Positives = 32/61 (52%)
Frame = -2
Query: 503 ILSRHSYRPALSLNGRRFFVTHCLYTLLHIIRKICFFKVLNRIMNLNATYSYLVIISVLF 324
++ R +YR N + + + Y + +I + F + + ++NLN T +L I+++F
Sbjct: 26 LVYRKAYRFNSERNTATYPIVNSFYKKVALINALYFIESILIVVNLNVTNEWLNKIAIIF 85
Query: 323 D 321
+
Sbjct: 86 N 86
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,558,093
Number of Sequences: 27780
Number of extensions: 360226
Number of successful extensions: 1212
Number of sequences better than 10.0: 57
Number of HSP's better than 10.0 without gapping: 1061
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1180
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1745954468
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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