Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0392
(708 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF106589-2|AAC78230.1| 107|Caenorhabditis elegans Hypothetical ... 42 6e-04
Z81552-7|CAB04487.2| 606|Caenorhabditis elegans Hypothetical pr... 37 0.012
AL117201-5|CAB57916.1| 606|Caenorhabditis elegans Hypothetical ... 37 0.012
AF250925-1|AAF74721.1| 542|Caenorhabditis elegans PNGase protein. 37 0.012
U23168-7|AAC38808.1| 115|Caenorhabditis elegans Hypothetical pr... 33 0.20
U23168-6|AAP86623.1| 114|Caenorhabditis elegans Hypothetical pr... 33 0.20
DQ241300-1|ABB45864.1| 114|Caenorhabditis elegans TRX-1b protein. 33 0.20
DQ241299-1|ABB45863.1| 115|Caenorhabditis elegans TRX-1a protein. 33 0.20
AF143900-1|AAF66677.1| 284|Caenorhabditis elegans thioredoxin-l... 31 0.81
AF143405-1|AAF66636.1| 284|Caenorhabditis elegans thioredoxin-l... 31 0.81
AC024810-17|AAF60759.1| 284|Caenorhabditis elegans Hypothetical... 31 0.81
AC024827-2|AAF60805.2| 254|Caenorhabditis elegans Hypothetical ... 31 1.1
Z71178-7|CAA94881.1| 119|Caenorhabditis elegans Hypothetical pr... 30 1.4
AF039049-1|AAB94253.1| 299|Caenorhabditis elegans Serpentine re... 29 3.3
AF125951-5|AAL27238.1| 345|Caenorhabditis elegans Hypothetical ... 28 7.5
AF125951-4|AAT68898.1| 342|Caenorhabditis elegans Hypothetical ... 28 7.5
Z99277-2|CAB16487.1| 557|Caenorhabditis elegans Hypothetical pr... 27 9.9
Z92804-1|CAB07252.1| 338|Caenorhabditis elegans Hypothetical pr... 27 9.9
CU457740-11|CAM36341.1| 353|Caenorhabditis elegans Hypothetical... 27 9.9
AL033514-32|CAA22112.1| 344|Caenorhabditis elegans Hypothetical... 27 9.9
>AF106589-2|AAC78230.1| 107|Caenorhabditis elegans Hypothetical
protein Y44E3A.3 protein.
Length = 107
Score = 41.5 bits (93), Expect = 6e-04
Identities = 21/51 (41%), Positives = 26/51 (50%)
Frame = +2
Query: 2 EIAAEMXXXXXXXXXXXXXXXXXASEYNINSMPTFVFVKNGKKLDEFSGAN 154
E+AAE EY INSMPTF+ + +G K D+FSGAN
Sbjct: 44 ELAAEHKDRLSILKIDVDECDGVGEEYEINSMPTFLLIVDGIKKDQFSGAN 94
>Z81552-7|CAB04487.2| 606|Caenorhabditis elegans Hypothetical
protein F56G4.5 protein.
Length = 606
Score = 37.1 bits (82), Expect = 0.012
Identities = 14/25 (56%), Positives = 21/25 (84%)
Frame = +2
Query: 80 YNINSMPTFVFVKNGKKLDEFSGAN 154
YNI++MPTF+F+KN +++D GAN
Sbjct: 71 YNISAMPTFIFLKNRQQVDMVRGAN 95
>AL117201-5|CAB57916.1| 606|Caenorhabditis elegans Hypothetical
protein F56G4.5 protein.
Length = 606
Score = 37.1 bits (82), Expect = 0.012
Identities = 14/25 (56%), Positives = 21/25 (84%)
Frame = +2
Query: 80 YNINSMPTFVFVKNGKKLDEFSGAN 154
YNI++MPTF+F+KN +++D GAN
Sbjct: 71 YNISAMPTFIFLKNRQQVDMVRGAN 95
>AF250925-1|AAF74721.1| 542|Caenorhabditis elegans PNGase protein.
Length = 542
Score = 37.1 bits (82), Expect = 0.012
Identities = 14/25 (56%), Positives = 21/25 (84%)
Frame = +2
Query: 80 YNINSMPTFVFVKNGKKLDEFSGAN 154
YNI++MPTF+F+KN +++D GAN
Sbjct: 7 YNISAMPTFIFLKNRQQVDMVRGAN 31
>U23168-7|AAC38808.1| 115|Caenorhabditis elegans Hypothetical
protein B0228.5a protein.
Length = 115
Score = 33.1 bits (72), Expect = 0.20
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = +2
Query: 74 SEYNINSMPTFVFVKNGKKLDEFSGANVD 160
S+Y++ MPTF+F KNG ++ G D
Sbjct: 74 SKYDVKMMPTFIFTKNGDAIEALEGCVED 102
>U23168-6|AAP86623.1| 114|Caenorhabditis elegans Hypothetical
protein B0228.5b protein.
Length = 114
Score = 33.1 bits (72), Expect = 0.20
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = +2
Query: 74 SEYNINSMPTFVFVKNGKKLDEFSGANVD 160
S+Y++ MPTF+F KNG ++ G D
Sbjct: 73 SKYDVKMMPTFIFTKNGDAIEALEGCVED 101
>DQ241300-1|ABB45864.1| 114|Caenorhabditis elegans TRX-1b protein.
Length = 114
Score = 33.1 bits (72), Expect = 0.20
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = +2
Query: 74 SEYNINSMPTFVFVKNGKKLDEFSGANVD 160
S+Y++ MPTF+F KNG ++ G D
Sbjct: 73 SKYDVKMMPTFIFTKNGDAIEALEGCVED 101
>DQ241299-1|ABB45863.1| 115|Caenorhabditis elegans TRX-1a protein.
Length = 115
Score = 33.1 bits (72), Expect = 0.20
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = +2
Query: 74 SEYNINSMPTFVFVKNGKKLDEFSGANVD 160
S+Y++ MPTF+F KNG ++ G D
Sbjct: 74 SKYDVKMMPTFIFTKNGDAIEALEGCVED 102
>AF143900-1|AAF66677.1| 284|Caenorhabditis elegans thioredoxin-like
protein protein.
Length = 284
Score = 31.1 bits (67), Expect = 0.81
Identities = 11/28 (39%), Positives = 21/28 (75%)
Frame = +2
Query: 71 ASEYNINSMPTFVFVKNGKKLDEFSGAN 154
+SE +NSMPTF+ ++G ++++ GA+
Sbjct: 67 SSENGVNSMPTFMVFQSGVRVEQMKGAD 94
>AF143405-1|AAF66636.1| 284|Caenorhabditis elegans thioredoxin-like
protein TXL protein.
Length = 284
Score = 31.1 bits (67), Expect = 0.81
Identities = 11/28 (39%), Positives = 21/28 (75%)
Frame = +2
Query: 71 ASEYNINSMPTFVFVKNGKKLDEFSGAN 154
+SE +NSMPTF+ ++G ++++ GA+
Sbjct: 67 SSENGVNSMPTFMVFQSGVRVEQMKGAD 94
>AC024810-17|AAF60759.1| 284|Caenorhabditis elegans Hypothetical
protein Y54E10A.3 protein.
Length = 284
Score = 31.1 bits (67), Expect = 0.81
Identities = 11/28 (39%), Positives = 21/28 (75%)
Frame = +2
Query: 71 ASEYNINSMPTFVFVKNGKKLDEFSGAN 154
+SE +NSMPTF+ ++G ++++ GA+
Sbjct: 67 SSENGVNSMPTFMVFQSGVRVEQMKGAD 94
>AC024827-2|AAF60805.2| 254|Caenorhabditis elegans Hypothetical
protein Y55F3AR.2 protein.
Length = 254
Score = 30.7 bits (66), Expect = 1.1
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = +2
Query: 71 ASEYNINSMPTFVFVKNGKKLDEFSGAN 154
A+ Y +N+MPTF+ NG+K GA+
Sbjct: 67 AATYGVNAMPTFIAFVNGQKKATIQGAD 94
>Z71178-7|CAA94881.1| 119|Caenorhabditis elegans Hypothetical
protein B0024.9 protein.
Length = 119
Score = 30.3 bits (65), Expect = 1.4
Identities = 12/26 (46%), Positives = 18/26 (69%)
Frame = +2
Query: 71 ASEYNINSMPTFVFVKNGKKLDEFSG 148
A +Y I+++PT KNG+K+ FSG
Sbjct: 77 AMDYGISAVPTVFAFKNGEKISGFSG 102
>AF039049-1|AAB94253.1| 299|Caenorhabditis elegans Serpentine
receptor, class x protein68 protein.
Length = 299
Score = 29.1 bits (62), Expect = 3.3
Identities = 14/46 (30%), Positives = 19/46 (41%)
Frame = +2
Query: 416 TTQTVFLFWFFLPSGC*GTLMYELLCFYFYFVRLTQMYNLTNTNQC 553
T + W F+ G L Y+ C Y Y+ T + TNT C
Sbjct: 119 TRWMIVFMWIFI--GSIAVLFYQKFC-YLYYDEATHFFTFTNTEFC 161
>AF125951-5|AAL27238.1| 345|Caenorhabditis elegans Hypothetical
protein D2063.3a protein.
Length = 345
Score = 27.9 bits (59), Expect = 7.5
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = +2
Query: 80 YNINSMPTFVFVKNGKKLDEFSG 148
+ I + PT VF NGK++D G
Sbjct: 69 FKITAAPTLVFFSNGKEVDRIDG 91
>AF125951-4|AAT68898.1| 342|Caenorhabditis elegans Hypothetical
protein D2063.3b protein.
Length = 342
Score = 27.9 bits (59), Expect = 7.5
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = +2
Query: 80 YNINSMPTFVFVKNGKKLDEFSG 148
+ I + PT VF NGK++D G
Sbjct: 69 FKITAAPTLVFFSNGKEVDRIDG 91
>Z99277-2|CAB16487.1| 557|Caenorhabditis elegans Hypothetical
protein Y53C12A.3 protein.
Length = 557
Score = 27.5 bits (58), Expect = 9.9
Identities = 16/56 (28%), Positives = 29/56 (51%)
Frame = +2
Query: 506 FVRLTQMYNLTNTNQCVR*VSIVLLKTFVSNKYHNVFFFYVMQVEACFFNAVLMRL 673
F+ + + + T+QC +VLL T + + H+ FF+V+ C +A+ M L
Sbjct: 189 FLTILSSFGYSLTSQC-----LVLLLTSLFHSSHDHLFFFVLLASFCVPSALRMGL 239
>Z92804-1|CAB07252.1| 338|Caenorhabditis elegans Hypothetical
protein K05D4.2 protein.
Length = 338
Score = 27.5 bits (58), Expect = 9.9
Identities = 22/73 (30%), Positives = 35/73 (47%), Gaps = 5/73 (6%)
Frame = +3
Query: 249 KKMYTFLINE*KMFLTSVM-NLKILIFCVCSLWNAKN--IGSVVIKQFNK*N*ILVNNLQ 419
KK+ F + +++ V+ N I +C C +WN N +VI +F + V L+
Sbjct: 124 KKLLRFSLRNCFLWILLVLSNFSIWFYC-CYIWNGSNDIKNEIVIPEFRE-----VYCLE 177
Query: 420 PKLYFYFG--FFY 452
P Y Y G +FY
Sbjct: 178 PNDYAYTGAQYFY 190
>CU457740-11|CAM36341.1| 353|Caenorhabditis elegans Hypothetical
protein C50E10.11 protein.
Length = 353
Score = 27.5 bits (58), Expect = 9.9
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = +3
Query: 306 NLKILIFCVCSLWNAKNIGSVVIK 377
NL ILIF V W+A IG + IK
Sbjct: 58 NLNILIFIVIFSWSASAIGRLFIK 81
>AL033514-32|CAA22112.1| 344|Caenorhabditis elegans Hypothetical
protein Y75B8A.34 protein.
Length = 344
Score = 27.5 bits (58), Expect = 9.9
Identities = 9/18 (50%), Positives = 14/18 (77%)
Frame = +3
Query: 291 LTSVMNLKILIFCVCSLW 344
+ S++NL I +FCVC +W
Sbjct: 53 VVSLINLVIQLFCVCFIW 70
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,124,392
Number of Sequences: 27780
Number of extensions: 270181
Number of successful extensions: 607
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 589
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 607
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1645110168
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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