Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0390
(767 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
11_04_0166 + 14317129-14317962,14318042-14318809,14319008-143197... 31 1.3
10_08_0705 + 20032111-20032437,20032525-20032896 31 1.3
08_01_0194 - 1603702-1603782,1603970-1604062,1604203-1604328,160... 31 1.3
06_03_0796 - 24690115-24690247,24690622-24690808,24691060-246912... 31 1.3
06_01_0996 + 7746358-7746493,7747102-7747262,7747586-7747647,774... 30 2.3
03_05_0478 - 24712157-24712177,24712206-24712260,24712377-247124... 30 2.3
10_08_0710 + 20070655-20070990,20071074-20071469 29 3.1
09_06_0172 + 21329904-21331512,21331595-21331740,21332333-213325... 29 4.1
05_03_0643 - 16515183-16515758,16516502-16516532,16516717-165167... 29 4.1
10_08_0714 + 20081801-20082130,20082205-20082597 29 5.4
06_01_0897 - 6903294-6903401,6903781-6903855,6904239-6904379,690... 29 5.4
03_06_0008 - 30978448-30978593,30978673-30978733,30978822-309790... 29 5.4
03_06_0006 + 30963331-30963457,30963751-30964715,30965166-309653... 29 5.4
12_01_1054 + 10847342-10847543,10847627-10847962,10848557-108488... 28 7.1
09_06_0086 - 20763085-20763162,20763233-20763286,20763287-207639... 28 7.1
06_01_0983 - 7630651-7630683,7630717-7630942,7630993-7631234,763... 28 7.1
03_02_0919 - 12392471-12392636,12392740-12392931,12393366-123934... 28 7.1
10_08_0720 - 20100406-20100798,20100917-20101249 28 9.4
10_08_0706 + 20034534-20034860,20034988-20035368 28 9.4
08_01_0558 - 4892520-4892696,4893086-4893271,4893497-4893692,489... 28 9.4
04_01_0328 - 4330904-4333129 28 9.4
>11_04_0166 +
14317129-14317962,14318042-14318809,14319008-14319740,
14353399-14353892,14353971-14354417,14354505-14355110,
14355204-14355391,14355470-14355640,14355723-14355810
Length = 1442
Score = 30.7 bits (66), Expect = 1.3
Identities = 27/73 (36%), Positives = 37/73 (50%), Gaps = 3/73 (4%)
Frame = -1
Query: 404 IDRDILRLSQNLFYGLLVSAELV---RIFSLQIFHRLSHQVMEPLWIGHYRPAVLFHVFL 234
ID DIL QN LVS EL+ F++ + H L H V E IG P L ++F
Sbjct: 537 IDPDILEALQNDVVQCLVSFELIFPPSFFNI-MMHLLCHLVKE---IGILGPVYLHNMFP 592
Query: 233 FLRSVFRDVIRNF 195
F R + DV++ +
Sbjct: 593 FER--YMDVLKKY 603
>10_08_0705 + 20032111-20032437,20032525-20032896
Length = 232
Score = 30.7 bits (66), Expect = 1.3
Identities = 19/52 (36%), Positives = 29/52 (55%)
Frame = +2
Query: 434 SPYCLKVETWLRLAGIKYENVEHHANIVPKKANCRSWN*MAKK*PIALSSSK 589
SPY L+V+ L L G+ YE VE +++ K S N + KK P+ + + K
Sbjct: 16 SPYVLRVKFALSLKGLSYEYVEE--DLMNKSDLLLSSNPVNKKVPVLIHNGK 65
>08_01_0194 -
1603702-1603782,1603970-1604062,1604203-1604328,
1604403-1604513,1604989-1605108,1605665-1605757,
1606024-1606157,1606503-1606530,1606821-1607075,
1607167-1607401,1608147-1608193
Length = 440
Score = 30.7 bits (66), Expect = 1.3
Identities = 12/41 (29%), Positives = 20/41 (48%)
Frame = -1
Query: 530 WPFLERYWHDALRSRT*CRPNEAMFQLLSNMGMSTVTKECA 408
W +ER+W + + C P E F L + + ++ECA
Sbjct: 98 WDTMERFWQQCIFNYLRCNPEEHYFLLTDSPVSTPESRECA 138
>06_03_0796 -
24690115-24690247,24690622-24690808,24691060-24691222,
24691503-24691688,24692005-24692174,24692648-24692774
Length = 321
Score = 30.7 bits (66), Expect = 1.3
Identities = 19/77 (24%), Positives = 36/77 (46%)
Frame = -1
Query: 575 VLSAISSPFSSTNGSWPFLERYWHDALRSRT*CRPNEAMFQLLSNMGMSTVTKECAKIDR 396
++S+I++ FS+ N WP + + D+ CR N+ + L + AK
Sbjct: 127 MVSSIAAVFSNPN--WPKDKAFTEDSWSDEELCRKNQDWYYLSKTVAEREAFAYAAKTGL 184
Query: 395 DILRLSQNLFYGLLVSA 345
DI+ + +L G L+ +
Sbjct: 185 DIVTICPSLVIGPLMQS 201
>06_01_0996 +
7746358-7746493,7747102-7747262,7747586-7747647,
7748142-7748595,7748994-7749134,7749444-7749633,
7749842-7750530,7750605-7750804,7751210-7751375,
7751850-7752046,7752162-7752396
Length = 876
Score = 29.9 bits (64), Expect = 2.3
Identities = 11/33 (33%), Positives = 21/33 (63%)
Frame = +1
Query: 640 QRVISHAMISMIENHLSWVILWWRAKYPDSVIK 738
+++++H M+S EN + W+ + W K PD +K
Sbjct: 843 KKLLTHKMLSFQENRVQWMQVLW-GKEPDPTLK 874
>03_05_0478 -
24712157-24712177,24712206-24712260,24712377-24712473,
24712558-24713302,24713822-24714189,24714279-24714419,
24715480-24715849
Length = 598
Score = 29.9 bits (64), Expect = 2.3
Identities = 13/31 (41%), Positives = 20/31 (64%), Gaps = 1/31 (3%)
Frame = +3
Query: 177 NSNMTVEVTN-NIPENAPEKEKDMKEDRRPI 266
N+N E+ N N+P + P+K+K K +RR I
Sbjct: 126 NNNDLAEIRNDNVPASIPQKQKTSKAERRAI 156
>10_08_0710 + 20070655-20070990,20071074-20071469
Length = 243
Score = 29.5 bits (63), Expect = 3.1
Identities = 18/52 (34%), Positives = 27/52 (51%)
Frame = +2
Query: 434 SPYCLKVETWLRLAGIKYENVEHHANIVPKKANCRSWN*MAKK*PIALSSSK 589
SPY L+ + L G+ YENVE ++ K S N + KK P+ + + K
Sbjct: 19 SPYVLRAKFALSFKGLSYENVEE--DLHNKSELLLSSNPVHKKVPVLIHNGK 68
>09_06_0172 +
21329904-21331512,21331595-21331740,21332333-21332556,
21333689-21334448
Length = 912
Score = 29.1 bits (62), Expect = 4.1
Identities = 17/45 (37%), Positives = 23/45 (51%)
Frame = +3
Query: 627 SDVGAAGYISRHDLHDREPPVVGDSLVARQVPGQCY*GIPSESSE 761
S+ ++G HD+H E VVG+ V R P Q G+P SE
Sbjct: 447 SEASSSGSNQEHDVHVVEKSVVGEQ-VQRSEPRQHVAGLPPIGSE 490
>05_03_0643 -
16515183-16515758,16516502-16516532,16516717-16516756,
16517183-16517243
Length = 235
Score = 29.1 bits (62), Expect = 4.1
Identities = 20/68 (29%), Positives = 35/68 (51%), Gaps = 7/68 (10%)
Frame = +3
Query: 546 TEWRRNSR*HF---HHQR--SFREIQQRS*CWSDVG--AAGYISRHDLHDREPPVVGDSL 704
T++ N R HF HH +++++S S++ A I+R+D D+ PV+ +L
Sbjct: 27 TDYLANIRVHFLRSHHSTVGKVSKMEEKSSAMSNIAPVAPTRITRYDKDDKHKPVIVCAL 86
Query: 705 VARQVPGQ 728
A +P Q
Sbjct: 87 AALPIPSQ 94
>10_08_0714 + 20081801-20082130,20082205-20082597
Length = 240
Score = 28.7 bits (61), Expect = 5.4
Identities = 17/52 (32%), Positives = 25/52 (48%)
Frame = +2
Query: 434 SPYCLKVETWLRLAGIKYENVEHHANIVPKKANCRSWN*MAKK*PIALSSSK 589
SPY +V+ L L G+ YE V + K S N + KK P+ + + K
Sbjct: 15 SPYVSRVKLALHLKGLSYEYVVEEDHFNNKSELLLSSNPVHKKVPVMIHNGK 66
>06_01_0897 -
6903294-6903401,6903781-6903855,6904239-6904379,
6904496-6904646,6905035-6905178,6905276-6905366,
6906071-6906308
Length = 315
Score = 28.7 bits (61), Expect = 5.4
Identities = 12/30 (40%), Positives = 20/30 (66%)
Frame = +1
Query: 517 SKKGQLPFVELNGEEIADSTFIIKDLSEKY 606
S +G++P V+L + +ADS I + + EKY
Sbjct: 115 SPEGKVPIVKLEEQWVADSDVITQAIEEKY 144
>03_06_0008 -
30978448-30978593,30978673-30978733,30978822-30979007,
30979458-30980422,30980716-30980842
Length = 494
Score = 28.7 bits (61), Expect = 5.4
Identities = 15/37 (40%), Positives = 20/37 (54%)
Frame = +1
Query: 487 RERRASCQYRSKKGQLPFVELNGEEIADSTFIIKDLS 597
R+RR K+G P E NGEE AD+ + D+S
Sbjct: 24 RQRRKRAAAGKKQGGSPASENNGEEHADAQGCLPDIS 60
>03_06_0006 +
30963331-30963457,30963751-30964715,30965166-30965351,
30965440-30965500,30965580-30965623
Length = 460
Score = 28.7 bits (61), Expect = 5.4
Identities = 15/37 (40%), Positives = 20/37 (54%)
Frame = +1
Query: 487 RERRASCQYRSKKGQLPFVELNGEEIADSTFIIKDLS 597
R+RR K+G P E NGEE AD+ + D+S
Sbjct: 24 RQRRKRAAAGKKQGGSPASENNGEEHADAQGCLPDIS 60
>12_01_1054 +
10847342-10847543,10847627-10847962,10848557-10848807,
10849226-10849313,10849548-10849723,10850597-10850656,
10850811-10850901,10851563-10851639,10852565-10852653,
10852950-10853061,10853623-10853725,10854892-10855121
Length = 604
Score = 28.3 bits (60), Expect = 7.1
Identities = 17/55 (30%), Positives = 27/55 (49%)
Frame = -1
Query: 653 DITRCSDVRPASRSLLYFSERSLMMKVLSAISSPFSSTNGSWPFLERYWHDALRS 489
+I CS PA RSL E + +++ + F+S+ S P +E + AL S
Sbjct: 244 NIVSCSKFFPAKRSLSLTRENADAIQITILSNQSFNSSKASTPAVEYFPAPALAS 298
>09_06_0086 -
20763085-20763162,20763233-20763286,20763287-20763975,
20764173-20764324,20764404-20764604,20764920-20765064,
20765552-20765588,20765880-20765965,20766093-20766329,
20766501-20766609,20767025-20767135
Length = 632
Score = 28.3 bits (60), Expect = 7.1
Identities = 12/40 (30%), Positives = 22/40 (55%)
Frame = -1
Query: 143 LTRIASLTITAVRARSNNRTACRLLLSGVCSTIICFKQTK 24
+ +I + + +R R + R LL + + IICF++TK
Sbjct: 1 MVKIVTYNVNGLRPRVAQHGSLRRLLDALDADIICFQETK 40
>06_01_0983 -
7630651-7630683,7630717-7630942,7630993-7631234,
7631502-7631591,7631680-7631845,7632225-7633191,
7633402-7633591,7633908-7634048,7634416-7634736
Length = 791
Score = 28.3 bits (60), Expect = 7.1
Identities = 10/38 (26%), Positives = 22/38 (57%)
Frame = +1
Query: 640 QRVISHAMISMIENHLSWVILWWRAKYPDSVIKGYQVN 753
+++++H M+S N + W+ + W K PD +K ++
Sbjct: 750 KKLLTHKMLSFQGNRVQWMQVLW-GKEPDPTLKNQHIS 786
>03_02_0919 -
12392471-12392636,12392740-12392931,12393366-12393463,
12393719-12394219,12394287-12394532,12395627-12396029,
12396155-12396348,12396755-12396925,12397064-12397366,
12397463-12397520,12397678-12397757,12398910-12398987,
12399530-12399613,12399692-12399757,12399908-12399980,
12400080-12400249,12400368-12400427,12400632-12400679,
12401217-12401255,12401364-12401372
Length = 1012
Score = 28.3 bits (60), Expect = 7.1
Identities = 19/57 (33%), Positives = 23/57 (40%)
Frame = +3
Query: 213 PENAPEKEKDMKEDRRPIMANPKRLHYLMRKAMKNLKRKNPNQLSRNQQSIKQILRK 383
PE APEK+ D K R + N K K K LK K Q +L+K
Sbjct: 10 PEKAPEKQLDEKTLERKLRKNQK----AKEKEEKRLKAKQKEAAMLQAQPALDVLKK 62
>10_08_0720 - 20100406-20100798,20100917-20101249
Length = 241
Score = 27.9 bits (59), Expect = 9.4
Identities = 16/52 (30%), Positives = 27/52 (51%)
Frame = +2
Query: 434 SPYCLKVETWLRLAGIKYENVEHHANIVPKKANCRSWN*MAKK*PIALSSSK 589
SP+ ++V L+L G+ YE +E ++ K S N + KK P+ + K
Sbjct: 16 SPFAIRVCIALKLKGVSYEYIEE--DLANKSELLLSSNPVHKKIPVLIHGGK 65
>10_08_0706 + 20034534-20034860,20034988-20035368
Length = 235
Score = 27.9 bits (59), Expect = 9.4
Identities = 17/53 (32%), Positives = 27/53 (50%)
Frame = +2
Query: 431 TSPYCLKVETWLRLAGIKYENVEHHANIVPKKANCRSWN*MAKK*PIALSSSK 589
TSP+ L+V+ L G+ YE E ++ K S N + KK P+ + + K
Sbjct: 15 TSPFALRVKLALSFKGLSYEYAEE--DLSNKSELLLSSNPVHKKVPVLIHNGK 65
>08_01_0558 -
4892520-4892696,4893086-4893271,4893497-4893692,
4893785-4893915
Length = 229
Score = 27.9 bits (59), Expect = 9.4
Identities = 24/93 (25%), Positives = 43/93 (46%), Gaps = 2/93 (2%)
Frame = -1
Query: 575 VLSAISSPFSSTNGSWPFLERYWHDALRSRT*CRPNEAMF-QLLSN-MGMSTVTKECAKI 402
V+S++ + F++ N WP E + D+ CR NE + LSN + + AK
Sbjct: 137 VVSSVVAVFNNPN--WPTGEPFNEDSWSDEETCRKNEEWYPYYLSNTLAEREAFEYAAKT 194
Query: 401 DRDILRLSQNLFYGLLVSAELVRIFSLQIFHRL 303
DI+ + L G L+ + S+++F +
Sbjct: 195 GMDIVTICPALIIGPLMQPTVPT--SIEVFFHI 225
>04_01_0328 - 4330904-4333129
Length = 741
Score = 27.9 bits (59), Expect = 9.4
Identities = 16/76 (21%), Positives = 34/76 (44%)
Frame = -1
Query: 734 ITLSGYLARHQRITHDRWFSIMEIMA*DITRCSDVRPASRSLLYFSERSLMMKVLSAISS 555
+++SG + + + F ++ + D ++ S Y E L+++V A+
Sbjct: 83 LSVSGTAGKRRLVAFWAPFFLLHLGGPDSITAYELEDNQLSARYVLE--LVLRVAGAVYI 140
Query: 554 PFSSTNGSWPFLERYW 507
+ ST+GSW + W
Sbjct: 141 VYKSTHGSWALISASW 156
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,326,692
Number of Sequences: 37544
Number of extensions: 402627
Number of successful extensions: 1223
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 1194
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1223
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 2063219900
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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