Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0390
         (767 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC011583-1|AAH11583.1|  409|Homo sapiens chromosome 6 open readi...    52   2e-06
BC004869-1|AAH04869.2|  409|Homo sapiens chromosome 6 open readi...    52   2e-06
AL034371-1|CAI19992.2|  409|Homo sapiens chromosome 6 open readi...    52   2e-06
AK057793-1|BAB71576.1|  288|Homo sapiens protein ( Homo sapiens ...    52   2e-06

>BC011583-1|AAH11583.1|  409|Homo sapiens chromosome 6 open reading
           frame 168 protein.
          Length = 409

 Score = 52.4 bits (120), Expect = 2e-06
 Identities = 22/63 (34%), Positives = 38/63 (60%)
 Frame = +1

Query: 517 SKKGQLPFVELNGEEIADSTFIIKDLSEKYNKDLDAGLTSEQRVISHAMISMIENHLSWV 696
           S +G++P++E N E+++ + FII  L EK   +L+  L   +R IS A+  M+E H  W 
Sbjct: 142 SAQGKMPWIEYNHEKVSGTEFIIDFLEEKLGVNLNKNLGPHERAISRAVTKMVEEHFYWT 201

Query: 697 ILW 705
           + +
Sbjct: 202 LAY 204



 Score = 46.4 bits (105), Expect = 1e-04
 Identities = 20/39 (51%), Positives = 30/39 (76%), Gaps = 1/39 (2%)
 Frame = +2

Query: 380 KDVVYLYQFSRTPL-LPSTSPYCLKVETWLRLAGIKYEN 493
           KD + L+QF+R    +PS SP+CLK+ET+LR+A + Y+N
Sbjct: 97  KDAIILHQFARPNNGVPSLSPFCLKMETYLRMADLPYQN 135


>BC004869-1|AAH04869.2|  409|Homo sapiens chromosome 6 open reading
           frame 168 protein.
          Length = 409

 Score = 52.4 bits (120), Expect = 2e-06
 Identities = 22/63 (34%), Positives = 38/63 (60%)
 Frame = +1

Query: 517 SKKGQLPFVELNGEEIADSTFIIKDLSEKYNKDLDAGLTSEQRVISHAMISMIENHLSWV 696
           S +G++P++E N E+++ + FII  L EK   +L+  L   +R IS A+  M+E H  W 
Sbjct: 142 SAQGKMPWIEYNHEKVSGTEFIIDFLEEKLGVNLNKNLGPHERAISRAVTKMVEEHFYWT 201

Query: 697 ILW 705
           + +
Sbjct: 202 LAY 204



 Score = 46.4 bits (105), Expect = 1e-04
 Identities = 20/39 (51%), Positives = 30/39 (76%), Gaps = 1/39 (2%)
 Frame = +2

Query: 380 KDVVYLYQFSRTPL-LPSTSPYCLKVETWLRLAGIKYEN 493
           KD + L+QF+R    +PS SP+CLK+ET+LR+A + Y+N
Sbjct: 97  KDAIILHQFARPNNGVPSLSPFCLKMETYLRMADLPYQN 135


>AL034371-1|CAI19992.2|  409|Homo sapiens chromosome 6 open reading
           frame 168 protein.
          Length = 409

 Score = 52.4 bits (120), Expect = 2e-06
 Identities = 22/63 (34%), Positives = 38/63 (60%)
 Frame = +1

Query: 517 SKKGQLPFVELNGEEIADSTFIIKDLSEKYNKDLDAGLTSEQRVISHAMISMIENHLSWV 696
           S +G++P++E N E+++ + FII  L EK   +L+  L   +R IS A+  M+E H  W 
Sbjct: 142 SAQGKMPWIEYNHEKVSGTEFIIDFLEEKLGVNLNKNLGPHERAISRAVTKMVEEHFYWT 201

Query: 697 ILW 705
           + +
Sbjct: 202 LAY 204



 Score = 46.4 bits (105), Expect = 1e-04
 Identities = 20/39 (51%), Positives = 30/39 (76%), Gaps = 1/39 (2%)
 Frame = +2

Query: 380 KDVVYLYQFSRTPL-LPSTSPYCLKVETWLRLAGIKYEN 493
           KD + L+QF+R    +PS SP+CLK+ET+LR+A + Y+N
Sbjct: 97  KDAIILHQFARPNNGVPSLSPFCLKMETYLRMADLPYQN 135


>AK057793-1|BAB71576.1|  288|Homo sapiens protein ( Homo sapiens
           cDNA FLJ25064 fis, clone CBL04883. ).
          Length = 288

 Score = 52.4 bits (120), Expect = 2e-06
 Identities = 22/63 (34%), Positives = 38/63 (60%)
 Frame = +1

Query: 517 SKKGQLPFVELNGEEIADSTFIIKDLSEKYNKDLDAGLTSEQRVISHAMISMIENHLSWV 696
           S +G++P++E N E+++ + FII  L EK   +L+  L   +R IS A+  M+E H  W 
Sbjct: 21  SAQGKMPWIEYNHEKVSGTEFIIDFLEEKLGVNLNKNLGPHERAISRAVTKMVEEHFYWT 80

Query: 697 ILW 705
           + +
Sbjct: 81  LAY 83


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 107,307,370
Number of Sequences: 237096
Number of extensions: 2066505
Number of successful extensions: 5621
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 5383
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5621
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9255747988
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)