Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0390
         (767 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.          24   1.8  
AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.      24   1.8  
AY569704-1|AAS86657.1|  426|Apis mellifera complementary sex det...    22   7.2  
AB183889-1|BAD86829.1|  316|Apis mellifera Mos protein.                22   7.2  
AY569719-1|AAS86672.1|  401|Apis mellifera feminizer protein.          21   9.5  
AY569718-1|AAS86671.1|  401|Apis mellifera feminizer protein.          21   9.5  
AY569715-1|AAS86668.1|  401|Apis mellifera feminizer protein.          21   9.5  
AY569714-1|AAS86667.1|  401|Apis mellifera feminizer protein.          21   9.5  
AY569713-1|AAS86666.1|  401|Apis mellifera feminizer protein.          21   9.5  
AY569711-1|AAS86664.1|  401|Apis mellifera feminizer protein.          21   9.5  
AY569702-1|AAS86655.1|  400|Apis mellifera feminizer protein.          21   9.5  
AY350616-1|AAQ57658.1|  401|Apis mellifera complementary sex det...    21   9.5  

>EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.
          Length = 683

 Score = 23.8 bits (49), Expect = 1.8
 Identities = 8/26 (30%), Positives = 15/26 (57%)
 Frame = -2

Query: 556 RHSVPRTAVGLFWNDIGMMLYVLVLN 479
           +H+VP   +  F  D+G+  +  +LN
Sbjct: 211 KHNVPEQRLNYFTEDVGLNHFYFMLN 236


>AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.
          Length = 683

 Score = 23.8 bits (49), Expect = 1.8
 Identities = 8/26 (30%), Positives = 15/26 (57%)
 Frame = -2

Query: 556 RHSVPRTAVGLFWNDIGMMLYVLVLN 479
           +H+VP   +  F  D+G+  +  +LN
Sbjct: 211 KHNVPEQRLNYFTEDVGLNHFYFMLN 236


>AY569704-1|AAS86657.1|  426|Apis mellifera complementary sex
           determiner protein.
          Length = 426

 Score = 21.8 bits (44), Expect = 7.2
 Identities = 13/46 (28%), Positives = 19/46 (41%)
 Frame = +3

Query: 216 ENAPEKEKDMKEDRRPIMANPKRLHYLMRKAMKNLKRKNPNQLSRN 353
           E + E+ +D  E  R     PK +  L  K + N    N N  + N
Sbjct: 294 ERSKERSRDRTERERS--REPKIISSLSNKTIHNNNNYNNNNYNNN 337


>AB183889-1|BAD86829.1|  316|Apis mellifera Mos protein.
          Length = 316

 Score = 21.8 bits (44), Expect = 7.2
 Identities = 12/31 (38%), Positives = 18/31 (58%), Gaps = 3/31 (9%)
 Frame = +3

Query: 264 IMANPKRLHYLMRKAMKNLKRKN---PNQLS 347
           I+ N KR++   R  +KN+ + N    NQLS
Sbjct: 18  ILKNDKRIYLSPRTPIKNVYKNNIETKNQLS 48


>AY569719-1|AAS86672.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 21.4 bits (43), Expect = 9.5
 Identities = 7/16 (43%), Positives = 10/16 (62%)
 Frame = +3

Query: 555 RRNSR*HFHHQRSFRE 602
           +RN+  H HH   FR+
Sbjct: 2   KRNTTNHSHHDERFRQ 17


>AY569718-1|AAS86671.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 21.4 bits (43), Expect = 9.5
 Identities = 7/16 (43%), Positives = 10/16 (62%)
 Frame = +3

Query: 555 RRNSR*HFHHQRSFRE 602
           +RN+  H HH   FR+
Sbjct: 2   KRNTTNHSHHDERFRQ 17


>AY569715-1|AAS86668.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 21.4 bits (43), Expect = 9.5
 Identities = 7/16 (43%), Positives = 10/16 (62%)
 Frame = +3

Query: 555 RRNSR*HFHHQRSFRE 602
           +RN+  H HH   FR+
Sbjct: 2   KRNTTNHSHHDERFRQ 17


>AY569714-1|AAS86667.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 21.4 bits (43), Expect = 9.5
 Identities = 7/16 (43%), Positives = 10/16 (62%)
 Frame = +3

Query: 555 RRNSR*HFHHQRSFRE 602
           +RN+  H HH   FR+
Sbjct: 2   KRNTTNHSHHDERFRQ 17


>AY569713-1|AAS86666.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 21.4 bits (43), Expect = 9.5
 Identities = 7/16 (43%), Positives = 10/16 (62%)
 Frame = +3

Query: 555 RRNSR*HFHHQRSFRE 602
           +RN+  H HH   FR+
Sbjct: 2   KRNTTNHSHHDERFRQ 17


>AY569711-1|AAS86664.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 21.4 bits (43), Expect = 9.5
 Identities = 7/16 (43%), Positives = 10/16 (62%)
 Frame = +3

Query: 555 RRNSR*HFHHQRSFRE 602
           +RN+  H HH   FR+
Sbjct: 2   KRNTTNHSHHDERFRQ 17


>AY569702-1|AAS86655.1|  400|Apis mellifera feminizer protein.
          Length = 400

 Score = 21.4 bits (43), Expect = 9.5
 Identities = 7/16 (43%), Positives = 10/16 (62%)
 Frame = +3

Query: 555 RRNSR*HFHHQRSFRE 602
           +RN+  H HH   FR+
Sbjct: 2   KRNTTNHSHHDERFRQ 17


>AY350616-1|AAQ57658.1|  401|Apis mellifera complementary sex
           determiner protein.
          Length = 401

 Score = 21.4 bits (43), Expect = 9.5
 Identities = 7/16 (43%), Positives = 10/16 (62%)
 Frame = +3

Query: 555 RRNSR*HFHHQRSFRE 602
           +RN+  H HH   FR+
Sbjct: 2   KRNTTNHSHHDERFRQ 17


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 204,685
Number of Sequences: 438
Number of extensions: 3967
Number of successful extensions: 18
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 24032646
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)