Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0390
(767 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g75270.1 68414.m08744 dehydroascorbate reductase, putative si... 32 0.48
At5g37460.1 68418.m04508 hypothetical protein contains Pfam PF04... 31 0.85
At5g62480.1 68418.m07841 glutathione S-transferase, putative 30 1.5
At5g28885.1 68418.m03555 hypothetical protein 30 1.5
At3g18680.2 68416.m02373 aspartate/glutamate/uridylate kinase fa... 30 2.0
At3g18680.1 68416.m02372 aspartate/glutamate/uridylate kinase fa... 30 2.0
At5g58840.1 68418.m07373 subtilase family protein contains simil... 29 2.6
At3g48670.2 68416.m05314 XH/XS domain-containing protein / XS zi... 29 3.4
At3g48670.1 68416.m05313 XH/XS domain-containing protein / XS zi... 29 3.4
At5g37470.1 68418.m04509 hypothetical protein contains Pfam PF04... 28 6.0
At4g19160.3 68417.m02827 expressed protein 28 6.0
At4g19160.2 68417.m02826 expressed protein 28 6.0
At4g19160.1 68417.m02828 expressed protein 28 6.0
At3g60110.1 68416.m06712 DNA-binding bromodomain-containing prot... 28 6.0
At5g59130.1 68418.m07411 subtilase family protein contains simil... 28 7.9
>At1g75270.1 68414.m08744 dehydroascorbate reductase, putative
similar to GI:6939839 from [Oryza sativa]
Length = 213
Score = 31.9 bits (69), Expect = 0.48
Identities = 14/30 (46%), Positives = 22/30 (73%)
Frame = +1
Query: 517 SKKGQLPFVELNGEEIADSTFIIKDLSEKY 606
S +G++P V+L+G+ +ADS I+ L EKY
Sbjct: 55 SPEGKVPVVKLDGKWVADSDVIVGLLEEKY 84
>At5g37460.1 68418.m04508 hypothetical protein contains Pfam PF04510
: Family of unknown function (DUF577)); common family
comprised of At5g37410, At5g37400, At5g37920,
At5g37460, At5g37650, At5g37470, At5g37420, At5g37430
Length = 622
Score = 31.1 bits (67), Expect = 0.85
Identities = 15/40 (37%), Positives = 21/40 (52%)
Frame = -1
Query: 314 FHRLSHQVMEPLWIGHYRPAVLFHVFLFLRSVFRDVIRNF 195
+H LS + LW+ P FHVF+ L SV++ I F
Sbjct: 141 WHELSDCI---LWLAENEPVKAFHVFIDLPSVYKSFINKF 177
>At5g62480.1 68418.m07841 glutathione S-transferase, putative
Length = 240
Score = 30.3 bits (65), Expect = 1.5
Identities = 23/86 (26%), Positives = 40/86 (46%)
Frame = +2
Query: 434 SPYCLKVETWLRLAGIKYENVEHHANIVPKKANCRSWN*MAKK*PIALSSSKIFPRNTTK 613
SPY ++E LRL I Y+ V+ ++ K +N + KK P+ + + K +
Sbjct: 17 SPYSKRIELALRLKSIPYQFVQE--DLQNKSQTLLRYNPVHKKIPVLVHNGKPISESLFI 74
Query: 614 ILMLV*RRSSGLYLTP*SP*SRTTCR 691
I + S+G ++ P P R+ R
Sbjct: 75 IEYIDETWSNGPHILPEDPYRRSKVR 100
>At5g28885.1 68418.m03555 hypothetical protein
Length = 184
Score = 30.3 bits (65), Expect = 1.5
Identities = 15/45 (33%), Positives = 24/45 (53%)
Frame = +1
Query: 538 FVELNGEEIADSTFIIKDLSEKYNKDLDAGLTSEQRVISHAMISM 672
F++++GE I S I+KD S+ +K LD L + I + M
Sbjct: 94 FIDVSGEIIGMSEIIVKDCSDNMSKLLDIQLRDLSQTIPECTLRM 138
>At3g18680.2 68416.m02373 aspartate/glutamate/uridylate kinase
family protein similar to UMP-kinase GB:CAB38122
gi:4468612 from [Lactococcus lactis] ; contains Pfam
profile PF00696: Amino acid kinase family
Length = 366
Score = 29.9 bits (64), Expect = 2.0
Identities = 17/42 (40%), Positives = 24/42 (57%)
Frame = -1
Query: 650 ITRCSDVRPASRSLLYFSERSLMMKVLSAISSPFSSTNGSWP 525
I+R S V R+ +FS ++ +VL + SS SS NGS P
Sbjct: 19 ISRTSFVPLTLRNRTFFSNQNYSRRVLISCSSSLSSDNGSSP 60
>At3g18680.1 68416.m02372 aspartate/glutamate/uridylate kinase
family protein similar to UMP-kinase GB:CAB38122
gi:4468612 from [Lactococcus lactis] ; contains Pfam
profile PF00696: Amino acid kinase family
Length = 339
Score = 29.9 bits (64), Expect = 2.0
Identities = 17/42 (40%), Positives = 24/42 (57%)
Frame = -1
Query: 650 ITRCSDVRPASRSLLYFSERSLMMKVLSAISSPFSSTNGSWP 525
I+R S V R+ +FS ++ +VL + SS SS NGS P
Sbjct: 19 ISRTSFVPLTLRNRTFFSNQNYSRRVLISCSSSLSSDNGSSP 60
>At5g58840.1 68418.m07373 subtilase family protein contains
similarity to prepro-cucumisin GI:807698 from [Cucumis
melo]; non-consensus acceptor site TT at exon 6
Length = 713
Score = 29.5 bits (63), Expect = 2.6
Identities = 14/45 (31%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
Frame = -3
Query: 747 LVSLNNTVRVLGAPPENHPRQVVLDHGDH-GVRYNPLLRRQTSIK 616
+V+ N TV +G P + ++VL+HG + V +P + S+K
Sbjct: 623 IVTFNRTVTNVGTPNSTYKSKIVLNHGSNLKVEVSPSVLSMKSVK 667
>At3g48670.2 68416.m05314 XH/XS domain-containing protein / XS zinc
finger domain-containing protein contains Pfam domains
PF03469: XH domain, PF03468: XS domain and PF03470: XS
zinc finger domain
Length = 647
Score = 29.1 bits (62), Expect = 3.4
Identities = 17/62 (27%), Positives = 32/62 (51%)
Frame = +3
Query: 198 VTNNIPENAPEKEKDMKEDRRPIMANPKRLHYLMRKAMKNLKRKNPNQLSRNQQSIKQIL 377
+ N+ + EK+KDMKE + L+ LM + KN ++K+ +L+ Q+ +
Sbjct: 267 LVQNLRQLVEEKKKDMKEIEELCSVKSEELNQLMEEKEKN-QQKHYRELNAIQERTMSHI 325
Query: 378 RK 383
+K
Sbjct: 326 QK 327
>At3g48670.1 68416.m05313 XH/XS domain-containing protein / XS zinc
finger domain-containing protein contains Pfam domains
PF03469: XH domain, PF03468: XS domain and PF03470: XS
zinc finger domain
Length = 647
Score = 29.1 bits (62), Expect = 3.4
Identities = 17/62 (27%), Positives = 32/62 (51%)
Frame = +3
Query: 198 VTNNIPENAPEKEKDMKEDRRPIMANPKRLHYLMRKAMKNLKRKNPNQLSRNQQSIKQIL 377
+ N+ + EK+KDMKE + L+ LM + KN ++K+ +L+ Q+ +
Sbjct: 267 LVQNLRQLVEEKKKDMKEIEELCSVKSEELNQLMEEKEKN-QQKHYRELNAIQERTMSHI 325
Query: 378 RK 383
+K
Sbjct: 326 QK 327
>At5g37470.1 68418.m04509 hypothetical protein contains Pfam PF04510
: Family of unknown function (DUF577)); common family
comprised of At5g37410, At5g37400, At5g37920,
At5g37460, At5g37650, At5g37470, At5g37420, At5g37430
Length = 629
Score = 28.3 bits (60), Expect = 6.0
Identities = 11/29 (37%), Positives = 16/29 (55%)
Frame = -1
Query: 281 LWIGHYRPAVLFHVFLFLRSVFRDVIRNF 195
LW+ P FHVF+ L S+++ I F
Sbjct: 151 LWLAENEPVKAFHVFIDLPSLYQSFIDKF 179
>At4g19160.3 68417.m02827 expressed protein
Length = 454
Score = 28.3 bits (60), Expect = 6.0
Identities = 16/58 (27%), Positives = 31/58 (53%)
Frame = +1
Query: 511 YRSKKGQLPFVELNGEEIADSTFIIKDLSEKYNKDLDAGLTSEQRVISHAMISMIENH 684
+++ GQ F +NG + D + DL+ K +DLD + + + +I A+ ++I H
Sbjct: 279 FKATSGQSLFSIVNGRCVDDPGSMASDLTAKSLQDLD--MATNRDIIGIALANLIRLH 334
>At4g19160.2 68417.m02826 expressed protein
Length = 453
Score = 28.3 bits (60), Expect = 6.0
Identities = 16/58 (27%), Positives = 31/58 (53%)
Frame = +1
Query: 511 YRSKKGQLPFVELNGEEIADSTFIIKDLSEKYNKDLDAGLTSEQRVISHAMISMIENH 684
+++ GQ F +NG + D + DL+ K +DLD + + + +I A+ ++I H
Sbjct: 279 FKATSGQSLFSIVNGRCVDDPGSMASDLTAKSLQDLD--MATNRDIIGIALANLIRLH 334
>At4g19160.1 68417.m02828 expressed protein
Length = 312
Score = 28.3 bits (60), Expect = 6.0
Identities = 16/58 (27%), Positives = 31/58 (53%)
Frame = +1
Query: 511 YRSKKGQLPFVELNGEEIADSTFIIKDLSEKYNKDLDAGLTSEQRVISHAMISMIENH 684
+++ GQ F +NG + D + DL+ K +DLD + + + +I A+ ++I H
Sbjct: 138 FKATSGQSLFSIVNGRCVDDPGSMASDLTAKSLQDLD--MATNRDIIGIALANLIRLH 193
>At3g60110.1 68416.m06712 DNA-binding bromodomain-containing protein
contains bromodomain, INTERPRO:IPR001487
Length = 438
Score = 28.3 bits (60), Expect = 6.0
Identities = 12/53 (22%), Positives = 28/53 (52%)
Frame = +3
Query: 201 TNNIPENAPEKEKDMKEDRRPIMANPKRLHYLMRKAMKNLKRKNPNQLSRNQQ 359
T + ++ EKE++ K +++ + K + +++ KN +K S+NQ+
Sbjct: 301 TESSDDDDDEKEENSKTEKKTVADKKKSVADFLKRIKKNSPQKGKETTSKNQK 353
>At5g59130.1 68418.m07411 subtilase family protein contains
similarity to prepro-cucumisin GI:807698 from [Cucumis
melo]
Length = 732
Score = 27.9 bits (59), Expect = 7.9
Identities = 13/36 (36%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
Frame = -3
Query: 747 LVSLNNTVRVLGAPPENHPRQVVLDHGDH-GVRYNP 643
+V+ N TV +G P + +VVL+HG V+ +P
Sbjct: 638 IVTFNRTVTNVGTPNSTYKSKVVLNHGSKLNVKVSP 673
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,144,326
Number of Sequences: 28952
Number of extensions: 320111
Number of successful extensions: 955
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 936
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 955
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1721869952
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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