Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0389
         (717 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BX537543-1|CAD97778.1|  161|Homo sapiens hypothetical protein pr...    31   4.1  
BC101969-1|AAI01970.1|  161|Homo sapiens LPS-induced TNF-alpha f...    31   4.1  
BC101402-1|AAI01403.1|  161|Homo sapiens lipopolysaccharide-indu...    31   4.1  
BC101401-1|AAI01402.1|  161|Homo sapiens LPS-induced TNF-alpha f...    31   4.1  
BC096066-1|AAH96066.1|  161|Homo sapiens lipopolysaccharide-indu...    31   4.1  
BC096065-1|AAH96065.1|  161|Homo sapiens lipopolysaccharide-indu...    31   4.1  
BC096063-1|AAH96063.1|  161|Homo sapiens lipopolysaccharide-indu...    31   4.1  
BC046154-1|AAH46154.1|  161|Homo sapiens lipopolysaccharide-indu...    31   4.1  
BC039840-1|AAH39840.1|  161|Homo sapiens lipopolysaccharide-indu...    31   4.1  
BC016491-1|AAH16491.1|  161|Homo sapiens lipopolysaccharide-indu...    31   4.1  
BC008309-1|AAH08309.1|  161|Homo sapiens lipopolysaccharide-indu...    31   4.1  
BC000053-1|AAH00053.1|  161|Homo sapiens LITAF protein protein.        31   4.1  
AB034747-1|BAB32547.1|  161|Homo sapiens small integral membrane...    31   4.1  

>BX537543-1|CAD97778.1|  161|Homo sapiens hypothetical protein
           protein.
          Length = 161

 Score = 31.1 bits (67), Expect = 4.1
 Identities = 11/22 (50%), Positives = 14/22 (63%)
 Frame = +1

Query: 355 DSCMDVHHKCPHCDTYLGRYRR 420
           D+  DV H CP+C   LG Y+R
Sbjct: 139 DALQDVDHYCPNCRALLGTYKR 160


>BC101969-1|AAI01970.1|  161|Homo sapiens LPS-induced TNF-alpha
           factor protein.
          Length = 161

 Score = 31.1 bits (67), Expect = 4.1
 Identities = 11/22 (50%), Positives = 14/22 (63%)
 Frame = +1

Query: 355 DSCMDVHHKCPHCDTYLGRYRR 420
           D+  DV H CP+C   LG Y+R
Sbjct: 139 DALQDVDHYCPNCRALLGTYKR 160


>BC101402-1|AAI01403.1|  161|Homo sapiens lipopolysaccharide-induced
           TNF factor protein.
          Length = 161

 Score = 31.1 bits (67), Expect = 4.1
 Identities = 11/22 (50%), Positives = 14/22 (63%)
 Frame = +1

Query: 355 DSCMDVHHKCPHCDTYLGRYRR 420
           D+  DV H CP+C   LG Y+R
Sbjct: 139 DALQDVDHYCPNCRALLGTYKR 160


>BC101401-1|AAI01402.1|  161|Homo sapiens LPS-induced TNF-alpha
           factor protein.
          Length = 161

 Score = 31.1 bits (67), Expect = 4.1
 Identities = 11/22 (50%), Positives = 14/22 (63%)
 Frame = +1

Query: 355 DSCMDVHHKCPHCDTYLGRYRR 420
           D+  DV H CP+C   LG Y+R
Sbjct: 139 DALQDVDHYCPNCRALLGTYKR 160


>BC096066-1|AAH96066.1|  161|Homo sapiens lipopolysaccharide-induced
           TNF factor protein.
          Length = 161

 Score = 31.1 bits (67), Expect = 4.1
 Identities = 11/22 (50%), Positives = 14/22 (63%)
 Frame = +1

Query: 355 DSCMDVHHKCPHCDTYLGRYRR 420
           D+  DV H CP+C   LG Y+R
Sbjct: 139 DALQDVDHYCPNCRALLGTYKR 160


>BC096065-1|AAH96065.1|  161|Homo sapiens lipopolysaccharide-induced
           TNF factor protein.
          Length = 161

 Score = 31.1 bits (67), Expect = 4.1
 Identities = 11/22 (50%), Positives = 14/22 (63%)
 Frame = +1

Query: 355 DSCMDVHHKCPHCDTYLGRYRR 420
           D+  DV H CP+C   LG Y+R
Sbjct: 139 DALQDVDHYCPNCRALLGTYKR 160


>BC096063-1|AAH96063.1|  161|Homo sapiens lipopolysaccharide-induced
           TNF factor protein.
          Length = 161

 Score = 31.1 bits (67), Expect = 4.1
 Identities = 11/22 (50%), Positives = 14/22 (63%)
 Frame = +1

Query: 355 DSCMDVHHKCPHCDTYLGRYRR 420
           D+  DV H CP+C   LG Y+R
Sbjct: 139 DALQDVDHYCPNCRALLGTYKR 160


>BC046154-1|AAH46154.1|  161|Homo sapiens lipopolysaccharide-induced
           TNF factor protein.
          Length = 161

 Score = 31.1 bits (67), Expect = 4.1
 Identities = 11/22 (50%), Positives = 14/22 (63%)
 Frame = +1

Query: 355 DSCMDVHHKCPHCDTYLGRYRR 420
           D+  DV H CP+C   LG Y+R
Sbjct: 139 DALQDVDHYCPNCRALLGTYKR 160


>BC039840-1|AAH39840.1|  161|Homo sapiens lipopolysaccharide-induced
           TNF factor protein.
          Length = 161

 Score = 31.1 bits (67), Expect = 4.1
 Identities = 11/22 (50%), Positives = 14/22 (63%)
 Frame = +1

Query: 355 DSCMDVHHKCPHCDTYLGRYRR 420
           D+  DV H CP+C   LG Y+R
Sbjct: 139 DALQDVDHYCPNCRALLGTYKR 160


>BC016491-1|AAH16491.1|  161|Homo sapiens lipopolysaccharide-induced
           TNF factor protein.
          Length = 161

 Score = 31.1 bits (67), Expect = 4.1
 Identities = 11/22 (50%), Positives = 14/22 (63%)
 Frame = +1

Query: 355 DSCMDVHHKCPHCDTYLGRYRR 420
           D+  DV H CP+C   LG Y+R
Sbjct: 139 DALQDVDHYCPNCRALLGTYKR 160


>BC008309-1|AAH08309.1|  161|Homo sapiens lipopolysaccharide-induced
           TNF factor protein.
          Length = 161

 Score = 31.1 bits (67), Expect = 4.1
 Identities = 11/22 (50%), Positives = 14/22 (63%)
 Frame = +1

Query: 355 DSCMDVHHKCPHCDTYLGRYRR 420
           D+  DV H CP+C   LG Y+R
Sbjct: 139 DALQDVDHYCPNCRALLGTYKR 160


>BC000053-1|AAH00053.1|  161|Homo sapiens LITAF protein protein.
          Length = 161

 Score = 31.1 bits (67), Expect = 4.1
 Identities = 11/22 (50%), Positives = 14/22 (63%)
 Frame = +1

Query: 355 DSCMDVHHKCPHCDTYLGRYRR 420
           D+  DV H CP+C   LG Y+R
Sbjct: 139 DALQDVDHYCPNCRALLGTYKR 160


>AB034747-1|BAB32547.1|  161|Homo sapiens small integral membrane
           protein of lysosome/late endosome protein.
          Length = 161

 Score = 31.1 bits (67), Expect = 4.1
 Identities = 11/22 (50%), Positives = 14/22 (63%)
 Frame = +1

Query: 355 DSCMDVHHKCPHCDTYLGRYRR 420
           D+  DV H CP+C   LG Y+R
Sbjct: 139 DALQDVDHYCPNCRALLGTYKR 160


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 89,602,549
Number of Sequences: 237096
Number of extensions: 1605808
Number of successful extensions: 3311
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 3182
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3310
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8399192100
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)