Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0387
(694 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC776.15c |||dihydrolipoamide S-succinyltransferase, e2 compon... 105 6e-24
SPCC794.07 |||dihydrolipoamide S-acetyltransferase E2 |Schizosac... 59 5e-10
SPBPJ4664.02 |||glycoprotein |Schizosaccharomyces pombe|chr 2|||... 27 1.9
SPAC29B12.05c |||mitochondrial S-adenosylmethionine-dependent me... 27 3.4
SPBC146.11c |mug97|meu33|meiotically upregulated gene Mug97|Schi... 26 4.5
SPAC14C4.10c |||Nudix family hydrolase|Schizosaccharomyces pombe... 26 4.5
SPCC188.06c |srp54||signal recognition particle subunit Srp54|Sc... 26 5.9
SPBC2G2.02 |syj1||inositol-polyphosphate 5-phosphatase |Schizosa... 26 5.9
SPAC3H5.06c |pol1|swi7, polA|DNA polymerase alpha catalytic subu... 26 5.9
SPAP8A3.13c |||Vid 24 family protein|Schizosaccharomyces pombe|c... 26 5.9
SPBC651.08c |rpc1||DNA-directed RNA polymerase III complex large... 25 7.9
SPBC23G7.08c |rga7||GTPase activating protein Rga7|Schizosacchar... 25 7.9
SPCC63.08c |ppk36|atg1|serine/threonine protein kinase Ppk36|Sch... 25 7.9
SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr 1... 25 7.9
SPAC15A10.16 |bud6|aip3, fat1, SPAC15E1.01|actin interacting pro... 25 7.9
>SPBC776.15c |||dihydrolipoamide S-succinyltransferase, e2 component
of oxoglutarate dehydrogenase complex
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 452
Score = 105 bits (252), Expect = 6e-24
Identities = 45/82 (54%), Positives = 62/82 (75%)
Frame = +3
Query: 255 TPVLRDVDTLGMADIEKKIKELAVKGCDGKLTVEDLTGGNFTITNGGVFGSLMSTPIINP 434
TPV+R+ +++ + +IE I L K GKL +ED+ G FTI+NGG+FGSL TPIIN
Sbjct: 329 TPVIRNAESMSLLEIESAIATLGSKARAGKLAIEDMASGTFTISNGGIFGSLYGTPIINL 388
Query: 435 PQSAILGMHAIKDRPMAVNGQV 500
PQ+A+LG+HAIK+RP+ +NGQV
Sbjct: 389 PQTAVLGLHAIKERPVVINGQV 410
Score = 89.0 bits (211), Expect = 6e-19
Identities = 41/89 (46%), Positives = 63/89 (70%), Gaps = 4/89 (4%)
Frame = +1
Query: 1 KNSTAMLTTFNEVNMKPIMDLRKQYGEAFEKRHGIRLGFMSFYVKAVVEALKRYPEVNAS 180
+N A LTTFNE +M ++ LRK+Y + K G+++GFMSF+ KA +A+K+ P +N S
Sbjct: 240 QNRAASLTTFNECDMSAVVALRKKYKDEILKETGVKIGFMSFFSKACTQAMKQIPAINGS 299
Query: 181 ID----GDDVVYHNYFDVSMAVSTPRGLV 255
I+ GD +VY ++ D+S+AV+TP+GLV
Sbjct: 300 IEGEGKGDTLVYRDFCDLSIAVATPKGLV 328
Score = 61.7 bits (143), Expect = 1e-10
Identities = 25/38 (65%), Positives = 33/38 (86%)
Frame = +2
Query: 509 PMMYLALSYDHRLIDGRESVGFLVTIKELLEDPTRLLL 622
PMMYLAL+YDHR++DGRE+V FL +KE +EDP ++LL
Sbjct: 414 PMMYLALTYDHRMVDGREAVTFLRLVKEYIEDPAKMLL 451
>SPCC794.07 |||dihydrolipoamide S-acetyltransferase E2
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 483
Score = 59.3 bits (137), Expect = 5e-10
Identities = 30/73 (41%), Positives = 42/73 (57%)
Frame = +3
Query: 255 TPVLRDVDTLGMADIEKKIKELAVKGCDGKLTVEDLTGGNFTITNGGVFGSLMSTPIINP 434
TPV+R+ LG+A+I K+ + + KL E+ GG FTI+N G+F T IINP
Sbjct: 358 TPVIRNTHALGLAEISTLAKDYGQRARNNKLKPEEYQGGTFTISNLGMFPVDQFTAIINP 417
Query: 435 PQSAILGMHAIKD 473
PQ+ IL + D
Sbjct: 418 PQACILAVGTTVD 430
Score = 50.8 bits (116), Expect = 2e-07
Identities = 28/73 (38%), Positives = 42/73 (57%)
Frame = +1
Query: 37 VNMKPIMDLRKQYGEAFEKRHGIRLGFMSFYVKAVVEALKRYPEVNASIDGDDVVYHNYF 216
VNM+ I+ LR + R+ +L +KA AL++ PEVNA+ GD + +
Sbjct: 287 VNMEKIIRLRAALNAMADGRY--KLSVNDLVIKATTAALRQVPEVNAAWMGDFIRQYKNV 344
Query: 217 DVSMAVSTPRGLV 255
D+SMAV+TP GL+
Sbjct: 345 DISMAVATPSGLI 357
Score = 38.7 bits (86), Expect = 8e-04
Identities = 15/38 (39%), Positives = 25/38 (65%)
Frame = +2
Query: 509 PMMYLALSYDHRLIDGRESVGFLVTIKELLEDPTRLLL 622
P+M LS DHR++DG + F +K++LE+P ++L
Sbjct: 446 PIMKCTLSSDHRVVDGAMAARFTTALKKILENPLEIML 483
>SPBPJ4664.02 |||glycoprotein |Schizosaccharomyces pombe|chr
2|||Manual
Length = 3971
Score = 27.5 bits (58), Expect = 1.9
Identities = 19/56 (33%), Positives = 28/56 (50%)
Frame = -1
Query: 418 VDIREPNTPPLVMVKLPPVRSSTVSLPSHPLTASSLIFFSMSAMPRVSTSRRTGVP 251
V+ P T V+ P+ SSTV S P+T+SS++ + S ST+ T P
Sbjct: 2802 VNTSTPITSSTVVNSSTPITSSTVLNSSTPITSSSVL--NSSTPITSSTALNTSTP 2855
Score = 27.1 bits (57), Expect = 2.6
Identities = 18/51 (35%), Positives = 26/51 (50%)
Frame = -1
Query: 403 PNTPPLVMVKLPPVRSSTVSLPSHPLTASSLIFFSMSAMPRVSTSRRTGVP 251
P T V+ P+ SSTV S P+T+SS++ + S ST+ T P
Sbjct: 1547 PITSSSVLNSSTPITSSTVVNTSTPITSSSVV--NSSTPITSSTALNTSTP 1595
Score = 26.6 bits (56), Expect = 3.4
Identities = 18/51 (35%), Positives = 26/51 (50%)
Frame = -1
Query: 403 PNTPPLVMVKLPPVRSSTVSLPSHPLTASSLIFFSMSAMPRVSTSRRTGVP 251
P T V+ P+ SSTV S P+T+SS++ + S ST+ T P
Sbjct: 1931 PITSSSVLNSSTPITSSTVVNSSTPITSSSVL--NSSTPITSSTALNTSTP 1979
Score = 26.6 bits (56), Expect = 3.4
Identities = 18/51 (35%), Positives = 26/51 (50%)
Frame = -1
Query: 403 PNTPPLVMVKLPPVRSSTVSLPSHPLTASSLIFFSMSAMPRVSTSRRTGVP 251
P T V+ P+ SSTV S P+T+SS++ + S ST+ T P
Sbjct: 2123 PITSSSVLNSSTPITSSTVVNSSTPITSSSVL--NSSTPITSSTALNTSTP 2171
Score = 26.6 bits (56), Expect = 3.4
Identities = 18/56 (32%), Positives = 28/56 (50%)
Frame = -1
Query: 418 VDIREPNTPPLVMVKLPPVRSSTVSLPSHPLTASSLIFFSMSAMPRVSTSRRTGVP 251
V+ P T V+ P+ SSTV S P+T+S+++ + S ST+ T P
Sbjct: 2262 VNTSTPITSSTVVNSSTPITSSTVVNTSTPITSSTVV--NSSTPITSSTALNTSTP 2315
Score = 26.6 bits (56), Expect = 3.4
Identities = 18/51 (35%), Positives = 26/51 (50%)
Frame = -1
Query: 403 PNTPPLVMVKLPPVRSSTVSLPSHPLTASSLIFFSMSAMPRVSTSRRTGVP 251
P T V+ P+ SSTV S P+T+SS++ + S ST+ T P
Sbjct: 2435 PITSSSVLNSSTPITSSTVVNSSTPITSSSVL--NSSTPITSSTALNTSTP 2483
Score = 26.6 bits (56), Expect = 3.4
Identities = 18/56 (32%), Positives = 28/56 (50%)
Frame = -1
Query: 418 VDIREPNTPPLVMVKLPPVRSSTVSLPSHPLTASSLIFFSMSAMPRVSTSRRTGVP 251
V+ P T V+ P+ SSTV S P+T+S+++ + S ST+ T P
Sbjct: 2670 VNTSTPITSSSVLNSSTPITSSTVVNTSTPITSSTVV--NSSTPITSSTALNTSTP 2723
Score = 26.6 bits (56), Expect = 3.4
Identities = 18/56 (32%), Positives = 28/56 (50%)
Frame = -1
Query: 418 VDIREPNTPPLVMVKLPPVRSSTVSLPSHPLTASSLIFFSMSAMPRVSTSRRTGVP 251
V+ P T V+ P+ SSTV S P+T+S+++ + S ST+ T P
Sbjct: 2898 VNTSTPITSSSVLNSSTPITSSTVVNTSTPITSSTVV--NSSTPITSSTALNTSTP 2951
Score = 26.6 bits (56), Expect = 3.4
Identities = 18/56 (32%), Positives = 28/56 (50%)
Frame = -1
Query: 418 VDIREPNTPPLVMVKLPPVRSSTVSLPSHPLTASSLIFFSMSAMPRVSTSRRTGVP 251
V+ P T V+ P+ SSTV S P+T+S+++ + S ST+ T P
Sbjct: 2994 VNTSTPITSSSVLNSSTPITSSTVVNTSTPITSSTVV--NSSTPITSSTALNTSTP 3047
Score = 26.6 bits (56), Expect = 3.4
Identities = 18/56 (32%), Positives = 28/56 (50%)
Frame = -1
Query: 418 VDIREPNTPPLVMVKLPPVRSSTVSLPSHPLTASSLIFFSMSAMPRVSTSRRTGVP 251
V+ P T V+ P+ SSTV S P+T+S+++ + S ST+ T P
Sbjct: 3258 VNTSTPITSSSVLNSSTPITSSTVVNTSTPITSSTVV--NSSTPITSSTTLNTSTP 3311
Score = 26.2 bits (55), Expect = 4.5
Identities = 19/56 (33%), Positives = 28/56 (50%)
Frame = -1
Query: 418 VDIREPNTPPLVMVKLPPVRSSTVSLPSHPLTASSLIFFSMSAMPRVSTSRRTGVP 251
V+ P T V+ P+ SSTV S P+T+SS++ + S ST+ T P
Sbjct: 582 VNTSTPITRYSVLNSSTPITSSTVLNSSTPITSSSVL--NSSTPITSSTALNTSTP 635
Score = 26.2 bits (55), Expect = 4.5
Identities = 14/37 (37%), Positives = 21/37 (56%)
Frame = -1
Query: 418 VDIREPNTPPLVMVKLPPVRSSTVSLPSHPLTASSLI 308
V+ P T V+ P+ SSTV S P+T+SS++
Sbjct: 786 VNTSTPITSSSVLNSSTPITSSTVLNSSTPITSSSVL 822
Score = 26.2 bits (55), Expect = 4.5
Identities = 18/51 (35%), Positives = 26/51 (50%)
Frame = -1
Query: 403 PNTPPLVMVKLPPVRSSTVSLPSHPLTASSLIFFSMSAMPRVSTSRRTGVP 251
P T V+ P+ SSTV S P+T+SS++ + S ST+ T P
Sbjct: 827 PITSSTVVNTSTPITSSTVVNSSTPITSSSVL--NSSTPITSSTALNTSTP 875
Score = 26.2 bits (55), Expect = 4.5
Identities = 14/37 (37%), Positives = 21/37 (56%)
Frame = -1
Query: 418 VDIREPNTPPLVMVKLPPVRSSTVSLPSHPLTASSLI 308
V+ P T V+ P+ SSTV S P+T+SS++
Sbjct: 1194 VNTSTPITSSTVVNSSTPITSSTVLNTSTPITSSSVL 1230
Score = 26.2 bits (55), Expect = 4.5
Identities = 14/37 (37%), Positives = 21/37 (56%)
Frame = -1
Query: 418 VDIREPNTPPLVMVKLPPVRSSTVSLPSHPLTASSLI 308
V+ P T V+ P+ SSTV S P+T+SS++
Sbjct: 1374 VNTSTPITSSTVVNSSTPITSSTVLNSSTPITSSSVL 1410
Score = 26.2 bits (55), Expect = 4.5
Identities = 14/37 (37%), Positives = 21/37 (56%)
Frame = -1
Query: 418 VDIREPNTPPLVMVKLPPVRSSTVSLPSHPLTASSLI 308
V+ P T V+ P+ SSTV S P+T+SS++
Sbjct: 1422 VNTSTPITSSTVVNSSTPITSSTVVNTSTPITSSSVL 1458
Score = 26.2 bits (55), Expect = 4.5
Identities = 14/37 (37%), Positives = 21/37 (56%)
Frame = -1
Query: 418 VDIREPNTPPLVMVKLPPVRSSTVSLPSHPLTASSLI 308
V+ P T V+ P+ SSTV S P+T+SS++
Sbjct: 1506 VNTSTPITSSTVVNSSTPITSSTVLNTSTPITSSSVL 1542
Score = 26.2 bits (55), Expect = 4.5
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = -1
Query: 403 PNTPPLVMVKLPPVRSSTVSLPSHPLTASSLI 308
P T + PP+ SSTV S P+T+S+++
Sbjct: 1643 PITSSTALNTSPPITSSTVVNSSTPITSSTVV 1674
Score = 26.2 bits (55), Expect = 4.5
Identities = 14/37 (37%), Positives = 21/37 (56%)
Frame = -1
Query: 418 VDIREPNTPPLVMVKLPPVRSSTVSLPSHPLTASSLI 308
V+ P T V+ P+ SSTV S P+T+SS++
Sbjct: 2214 VNTSTPITSSTVVNSSTPITSSTVLNSSTPITSSSVL 2250
Score = 26.2 bits (55), Expect = 4.5
Identities = 14/37 (37%), Positives = 21/37 (56%)
Frame = -1
Query: 418 VDIREPNTPPLVMVKLPPVRSSTVSLPSHPLTASSLI 308
V+ P T V+ P+ SSTV S P+T+SS++
Sbjct: 2502 VNTSTPITSSTVVNSSTPITSSTVLNSSTPITSSSVL 2538
Score = 26.2 bits (55), Expect = 4.5
Identities = 18/56 (32%), Positives = 27/56 (48%)
Frame = -1
Query: 418 VDIREPNTPPLVMVKLPPVRSSTVSLPSHPLTASSLIFFSMSAMPRVSTSRRTGVP 251
V+ P T V+ P+ SST S P+T+SS++ + S ST+ T P
Sbjct: 3282 VNTSTPITSSTVVNSSTPITSSTTLNTSTPITSSSVL--NSSTAITSSTALNTSTP 3335
Score = 25.8 bits (54), Expect = 5.9
Identities = 17/51 (33%), Positives = 26/51 (50%)
Frame = -1
Query: 403 PNTPPLVMVKLPPVRSSTVSLPSHPLTASSLIFFSMSAMPRVSTSRRTGVP 251
P T V+ P+ SSTV S P+T+S+++ + S ST+ T P
Sbjct: 467 PITSSSVLNSSTPITSSTVVNTSTPITSSTVV--NSSTPITSSTALNTSTP 515
Score = 25.8 bits (54), Expect = 5.9
Identities = 17/51 (33%), Positives = 26/51 (50%)
Frame = -1
Query: 403 PNTPPLVMVKLPPVRSSTVSLPSHPLTASSLIFFSMSAMPRVSTSRRTGVP 251
P T V+ P+ SSTV S P+T+S+++ + S ST+ T P
Sbjct: 875 PITSSSVLNSSTPITSSTVVNTSTPITSSTVV--NSSTPITSSTALNTSTP 923
Score = 25.8 bits (54), Expect = 5.9
Identities = 17/51 (33%), Positives = 26/51 (50%)
Frame = -1
Query: 403 PNTPPLVMVKLPPVRSSTVSLPSHPLTASSLIFFSMSAMPRVSTSRRTGVP 251
P T V+ P+ SSTV S P+T+S+++ + S ST+ T P
Sbjct: 1031 PITSSSVLNSSTPITSSTVVNTSTPITSSTVV--NSSTPITSSTALNTSTP 1079
Score = 25.8 bits (54), Expect = 5.9
Identities = 17/51 (33%), Positives = 26/51 (50%)
Frame = -1
Query: 403 PNTPPLVMVKLPPVRSSTVSLPSHPLTASSLIFFSMSAMPRVSTSRRTGVP 251
P T V+ P+ SSTV S P+T+S+++ + S ST+ T P
Sbjct: 1655 PITSSTVVNSSTPITSSTVVNTSTPITSSTVV--NSSTPITSSTALNTSTP 1703
Score = 25.8 bits (54), Expect = 5.9
Identities = 17/51 (33%), Positives = 26/51 (50%)
Frame = -1
Query: 403 PNTPPLVMVKLPPVRSSTVSLPSHPLTASSLIFFSMSAMPRVSTSRRTGVP 251
P T V+ P+ SSTV S P+T+S+++ + S ST+ T P
Sbjct: 1811 PITSSSVLNSSTPITSSTVVNTSTPITSSTVV--NSSTPITSSTALNTSTP 1859
Score = 25.8 bits (54), Expect = 5.9
Identities = 18/56 (32%), Positives = 27/56 (48%)
Frame = -1
Query: 418 VDIREPNTPPLVMVKLPPVRSSTVSLPSHPLTASSLIFFSMSAMPRVSTSRRTGVP 251
V+ P T V+ P+ SST S P+T+SS++ + S ST+ T P
Sbjct: 1830 VNTSTPITSSTVVNSSTPITSSTALNTSTPITSSSVL--NSSTPITSSTALNTSTP 1883
Score = 25.8 bits (54), Expect = 5.9
Identities = 17/51 (33%), Positives = 26/51 (50%)
Frame = -1
Query: 403 PNTPPLVMVKLPPVRSSTVSLPSHPLTASSLIFFSMSAMPRVSTSRRTGVP 251
P T V+ P+ SSTV S P+T+S+++ + S ST+ T P
Sbjct: 2003 PITSSSVLNSSTPITSSTVVNTSTPITSSTVV--NSSTPITSSTALNTSTP 2051
Score = 25.8 bits (54), Expect = 5.9
Identities = 18/56 (32%), Positives = 27/56 (48%)
Frame = -1
Query: 418 VDIREPNTPPLVMVKLPPVRSSTVSLPSHPLTASSLIFFSMSAMPRVSTSRRTGVP 251
V+ P T V+ P+ SST S P+T+SS++ + S ST+ T P
Sbjct: 2022 VNTSTPITSSTVVNSSTPITSSTALNTSTPITSSSVL--NSSTPITSSTALNTSTP 2075
Score = 25.8 bits (54), Expect = 5.9
Identities = 17/51 (33%), Positives = 26/51 (50%)
Frame = -1
Query: 403 PNTPPLVMVKLPPVRSSTVSLPSHPLTASSLIFFSMSAMPRVSTSRRTGVP 251
P T V+ P+ SSTV S P+T+S+++ + S ST+ T P
Sbjct: 2579 PITSSSVLNSSTPITSSTVVNTSTPITSSTVV--NSSTPITSSTALNTSTP 2627
Score = 25.4 bits (53), Expect = 7.9
Identities = 17/51 (33%), Positives = 25/51 (49%)
Frame = -1
Query: 403 PNTPPLVMVKLPPVRSSTVSLPSHPLTASSLIFFSMSAMPRVSTSRRTGVP 251
P T V+ P+ SST S P+T+SS++ + S ST+ T P
Sbjct: 671 PITSSSVLNSSTPITSSTALNTSTPITSSSVL--NSSTAITSSTALNTSTP 719
Score = 25.4 bits (53), Expect = 7.9
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = -1
Query: 403 PNTPPLVMVKLPPVRSSTVSLPSHPLTASSLI 308
P T V+ P+ SSTV S P+T+SS++
Sbjct: 767 PITSSSVLNSSTPITSSTVVNTSTPITSSSVL 798
Score = 25.4 bits (53), Expect = 7.9
Identities = 18/56 (32%), Positives = 26/56 (46%)
Frame = -1
Query: 418 VDIREPNTPPLVMVKLPPVRSSTVSLPSHPLTASSLIFFSMSAMPRVSTSRRTGVP 251
V+ P T V+ P+ SST S P+T+SS++ + S ST T P
Sbjct: 894 VNTSTPITSSTVVNSSTPITSSTALNTSTPITSSSVL--NSSTPITSSTGLNTSTP 947
Score = 25.4 bits (53), Expect = 7.9
Identities = 13/38 (34%), Positives = 21/38 (55%)
Frame = -1
Query: 421 GVDIREPNTPPLVMVKLPPVRSSTVSLPSHPLTASSLI 308
G++ P T V+ P+ SSTV S P+T+S+ +
Sbjct: 941 GLNTSTPITSSSVLNSSTPITSSTVLNSSTPITSSTAL 978
Score = 25.4 bits (53), Expect = 7.9
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = -1
Query: 403 PNTPPLVMVKLPPVRSSTVSLPSHPLTASSLI 308
P T V+ P+ SSTV S P+T+SS++
Sbjct: 1079 PITSSSVLNSSTPITSSTVLNSSTPITSSSVL 1110
Score = 25.4 bits (53), Expect = 7.9
Identities = 13/37 (35%), Positives = 21/37 (56%)
Frame = -1
Query: 418 VDIREPNTPPLVMVKLPPVRSSTVSLPSHPLTASSLI 308
V+ P T V+ P+ SSTV S P+T+S+++
Sbjct: 1158 VNTSTPITSSTVVNSSTPITSSTVVNTSTPITSSTVV 1194
Score = 25.4 bits (53), Expect = 7.9
Identities = 13/37 (35%), Positives = 21/37 (56%)
Frame = -1
Query: 418 VDIREPNTPPLVMVKLPPVRSSTVSLPSHPLTASSLI 308
V+ P T V+ P+ SSTV S P+T+S+++
Sbjct: 1326 VNTSTPITSSSVLNSSTPITSSTVVNSSTPITSSTVV 1362
Score = 25.4 bits (53), Expect = 7.9
Identities = 13/37 (35%), Positives = 21/37 (56%)
Frame = -1
Query: 418 VDIREPNTPPLVMVKLPPVRSSTVSLPSHPLTASSLI 308
V+ P T V+ P+ SSTV S P+T+S+++
Sbjct: 1446 VNTSTPITSSSVLNSSTPITSSTVVNTSTPITSSTVV 1482
Score = 25.4 bits (53), Expect = 7.9
Identities = 13/37 (35%), Positives = 21/37 (56%)
Frame = -1
Query: 418 VDIREPNTPPLVMVKLPPVRSSTVSLPSHPLTASSLI 308
V+ P T V+ P+ SSTV S P+T+S+++
Sbjct: 1470 VNTSTPITSSTVVNSSTPITSSTVVNTSTPITSSTVV 1506
Score = 25.4 bits (53), Expect = 7.9
Identities = 18/56 (32%), Positives = 27/56 (48%)
Frame = -1
Query: 418 VDIREPNTPPLVMVKLPPVRSSTVSLPSHPLTASSLIFFSMSAMPRVSTSRRTGVP 251
V+ P T V+ P+ SST S P+T+SS++ + S ST+ T P
Sbjct: 1566 VNTSTPITSSSVVNSSTPITSSTALNTSTPITSSSVL--NSSTPITSSTALNTSTP 1619
Score = 25.4 bits (53), Expect = 7.9
Identities = 17/51 (33%), Positives = 26/51 (50%)
Frame = -1
Query: 403 PNTPPLVMVKLPPVRSSTVSLPSHPLTASSLIFFSMSAMPRVSTSRRTGVP 251
P T V+ P+ SSTV S P+T+S+++ + S ST+ T P
Sbjct: 1715 PITSSTVVNTSTPITSSTVVNSSTPITSSTVV--NSSTPITSSTALNTSTP 1763
Score = 25.4 bits (53), Expect = 7.9
Identities = 18/56 (32%), Positives = 27/56 (48%)
Frame = -1
Query: 418 VDIREPNTPPLVMVKLPPVRSSTVSLPSHPLTASSLIFFSMSAMPRVSTSRRTGVP 251
V+ P T V+ P+ SST S P+T+SS++ + S ST+ T P
Sbjct: 1734 VNSSTPITSSTVVNSSTPITSSTALNTSTPITSSSVL--NSSTPITSSTALNTSTP 1787
Score = 25.4 bits (53), Expect = 7.9
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = -1
Query: 403 PNTPPLVMVKLPPVRSSTVSLPSHPLTASSLI 308
P T V+ P+ SSTV S P+T+SS++
Sbjct: 2315 PITSSSVLNSSTPITSSTVVNTSTPITSSSVL 2346
Score = 25.4 bits (53), Expect = 7.9
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = -1
Query: 403 PNTPPLVMVKLPPVRSSTVSLPSHPLTASSLI 308
P T V+ P+ SSTV S P+T+SS++
Sbjct: 2723 PITSSSVLNSSTPITSSTVVNTSTPITSSSVL 2754
Score = 25.4 bits (53), Expect = 7.9
Identities = 18/56 (32%), Positives = 27/56 (48%)
Frame = -1
Query: 418 VDIREPNTPPLVMVKLPPVRSSTVSLPSHPLTASSLIFFSMSAMPRVSTSRRTGVP 251
V+ P T + P+ SSTV S P+T+SS++ + S ST+ T P
Sbjct: 3030 VNSSTPITSSTALNTSTPITSSTVLNSSTPITSSSVL--NSSTPITSSTALNTSTP 3083
Score = 25.4 bits (53), Expect = 7.9
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = -1
Query: 403 PNTPPLVMVKLPPVRSSTVSLPSHPLTASSLI 308
P T V+ P+ SSTV S P+T+SS++
Sbjct: 3239 PITSSSVLNSSTPITSSTVVNTSTPITSSSVL 3270
>SPAC29B12.05c |||mitochondrial S-adenosylmethionine-dependent
methyltransferase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 309
Score = 26.6 bits (56), Expect = 3.4
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = +3
Query: 264 LRDVDTLGMADIEKKIKELAVKGCD 338
LR T+ D+ KK +LAVK CD
Sbjct: 138 LRVPHTIEAVDVSKKALKLAVKNCD 162
>SPBC146.11c |mug97|meu33|meiotically upregulated gene
Mug97|Schizosaccharomyces pombe|chr 2|||Manual
Length = 335
Score = 26.2 bits (55), Expect = 4.5
Identities = 15/41 (36%), Positives = 23/41 (56%)
Frame = -1
Query: 361 RSSTVSLPSHPLTASSLIFFSMSAMPRVSTSRRTGVPGRAA 239
R S P+ P TA++ I S ++PR +T G+PG +A
Sbjct: 118 RHSISETPTKPFTATTAIAGSAGSLPRNTT---IGLPGPSA 155
>SPAC14C4.10c |||Nudix family hydrolase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 329
Score = 26.2 bits (55), Expect = 4.5
Identities = 11/28 (39%), Positives = 15/28 (53%)
Frame = +1
Query: 544 SDRWSRIRGLPGNDQRVAGRSDASAAGR 627
+DRWS LPG + + +SD A R
Sbjct: 71 TDRWSGHMALPGGTRSLTDKSDIQTAHR 98
>SPCC188.06c |srp54||signal recognition particle subunit
Srp54|Schizosaccharomyces pombe|chr 3|||Manual
Length = 522
Score = 25.8 bits (54), Expect = 5.9
Identities = 17/60 (28%), Positives = 30/60 (50%), Gaps = 1/60 (1%)
Frame = +3
Query: 282 LGMADIEKKIKELAVKGCDGKLTVEDLTGGNFTITN-GGVFGSLMSTPIINPPQSAILGM 458
LG+ D+E ++ + D K V++L G FT+ + G++M ++ S I GM
Sbjct: 295 LGLGDLEGLMEHVQSLDFDKKNMVKNLEQGKFTVRDFRDQLGNIMKLGPLSKMASMIPGM 354
>SPBC2G2.02 |syj1||inositol-polyphosphate 5-phosphatase
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1076
Score = 25.8 bits (54), Expect = 5.9
Identities = 17/42 (40%), Positives = 21/42 (50%)
Frame = -1
Query: 403 PNTPPLVMVKLPPVRSSTVSLPSHPLTASSLIFFSMSAMPRV 278
PN P+ + PP R S+ S S L ASS S+S P V
Sbjct: 1035 PNLTPVNVPPTPPPRKSSASQRSGDLLASSPEESSISWKPLV 1076
>SPAC3H5.06c |pol1|swi7, polA|DNA polymerase alpha catalytic subunit
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1405
Score = 25.8 bits (54), Expect = 5.9
Identities = 12/51 (23%), Positives = 24/51 (47%)
Frame = +3
Query: 249 PGTPVLRDVDTLGMADIEKKIKELAVKGCDGKLTVEDLTGGNFTITNGGVF 401
P TP+ ++D ++I KIK + V + ++ + T +G +F
Sbjct: 281 PMTPLSSELDVSAFSEINSKIKNVDVPASSYSSPISKVSPSDVTEEDGSLF 331
>SPAP8A3.13c |||Vid 24 family protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 547
Score = 25.8 bits (54), Expect = 5.9
Identities = 12/40 (30%), Positives = 19/40 (47%)
Frame = -3
Query: 548 SDGDRRTAPGTSSEDLNLTIHRHRTIFDSVHTQNCALRRV 429
S G R P S LN+ H+H+ + ++ A RR+
Sbjct: 304 SYGSRTQTPNARSCSLNIVFHKHKKVCTYYMIRHYAKRRL 343
>SPBC651.08c |rpc1||DNA-directed RNA polymerase III complex large
subunit Rpc1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1405
Score = 25.4 bits (53), Expect = 7.9
Identities = 8/21 (38%), Positives = 13/21 (61%)
Frame = -3
Query: 116 KPRRMPWRFSNASPYCLRRSI 54
+P + WR+ A P C+R S+
Sbjct: 242 RPENLLWRYVPAPPVCIRPSV 262
>SPBC23G7.08c |rga7||GTPase activating protein
Rga7|Schizosaccharomyces pombe|chr 2|||Manual
Length = 695
Score = 25.4 bits (53), Expect = 7.9
Identities = 12/43 (27%), Positives = 23/43 (53%)
Frame = -1
Query: 397 TPPLVMVKLPPVRSSTVSLPSHPLTASSLIFFSMSAMPRVSTS 269
+PP+++ LPP++++T+ S I + +A P TS
Sbjct: 448 SPPVLLPTLPPIQTTTIQTSREVAPPPSSINSNRAASPFRPTS 490
>SPCC63.08c |ppk36|atg1|serine/threonine protein kinase
Ppk36|Schizosaccharomyces pombe|chr 3|||Manual
Length = 830
Score = 25.4 bits (53), Expect = 7.9
Identities = 12/37 (32%), Positives = 21/37 (56%)
Frame = +3
Query: 216 RRQHGGFYAARPGTPVLRDVDTLGMADIEKKIKELAV 326
R + GF+++ T L D TL +DI+ +KE+ +
Sbjct: 295 RIDYDGFFSSIVVTTPLDDASTLTGSDIQDAVKEINI 331
>SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 800
Score = 25.4 bits (53), Expect = 7.9
Identities = 14/38 (36%), Positives = 22/38 (57%)
Frame = -1
Query: 373 LPPVRSSTVSLPSHPLTASSLIFFSMSAMPRVSTSRRT 260
+PP +S+ S+P P T++S + S +P STS T
Sbjct: 195 VPPTSTSSTSIPIPP-TSTSSTDTNSSPLPTTSTSCTT 231
Score = 25.4 bits (53), Expect = 7.9
Identities = 14/38 (36%), Positives = 22/38 (57%)
Frame = -1
Query: 373 LPPVRSSTVSLPSHPLTASSLIFFSMSAMPRVSTSRRT 260
+PP +S+ S+P P T++S + S +P STS T
Sbjct: 251 VPPTSTSSTSIPIPP-TSTSSTDTNSSPLPTTSTSCTT 287
>SPAC15A10.16 |bud6|aip3, fat1, SPAC15E1.01|actin interacting
protein 3 homolog Bud6|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1385
Score = 25.4 bits (53), Expect = 7.9
Identities = 13/33 (39%), Positives = 20/33 (60%)
Frame = -1
Query: 367 PVRSSTVSLPSHPLTASSLIFFSMSAMPRVSTS 269
P RS T+S P+ PL+A+ L + +PR +S
Sbjct: 417 PQRSRTISSPNSPLSATVLPSSTPILLPRGRSS 449
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,891,510
Number of Sequences: 5004
Number of extensions: 59726
Number of successful extensions: 340
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 186
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 328
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 321951680
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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