BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0387
(694 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
04_03_0767 + 19389337-19389381,19390586-19390643,19390720-193907... 112 2e-25
02_03_0404 + 18648632-18648669,18649319-18649379,18649449-186494... 99 2e-21
02_01_0041 + 279583-281622,281724-282047,282315-282443,282526-28... 72 5e-13
07_03_0044 - 12758606-12758676,12758765-12758860,12759197-127592... 71 7e-13
06_01_0037 - 369498-369568,369668-369760,369889-369991,370061-37... 71 9e-13
01_03_0030 - 11787280-11787393,11787487-11787714,11788828-117889... 52 3e-07
08_02_0759 - 20851828-20851932,20852190-20852285,20853231-208533... 46 2e-05
09_04_0081 - 14400293-14400397,14400953-14401036,14401144-144012... 43 3e-04
06_03_0163 - 17380601-17380710,17380796-17380856,17381076-173811... 41 8e-04
12_01_0526 - 4171313-4171417,4171514-4171597,4171688-4171758,417... 31 0.66
08_01_0945 + 9376997-9377818,9378065-9378373,9379510-9379800,938... 31 1.1
03_05_0759 - 27500941-27501568,27503540-27504154,27504228-27504598 29 2.6
10_08_0903 - 21459932-21460201,21460660-21460993,21461126-214613... 28 6.1
03_01_0318 - 2495617-2497788 28 6.1
01_05_0693 - 24339917-24340524,24340778-24341252 28 6.1
08_02_1460 + 27295201-27295269,27295968-27296074,27296252-272963... 28 8.1
07_03_0382 + 17470508-17470807,17471449-17474517 28 8.1
04_04_0456 - 25355409-25355751,25356047-25356205,25356317-253565... 28 8.1
02_05_0686 - 30900748-30902167,30903442-30904742 28 8.1
>04_03_0767 +
19389337-19389381,19390586-19390643,19390720-19390759,
19390859-19390926,19391007-19391081,19391161-19391216,
19391317-19391361,19391450-19391701,19391787-19391881,
19392395-19392485,19392578-19392688,19392788-19392982,
19393071-19393262
Length = 440
Score = 112 bits (270), Expect = 2e-25
Identities = 49/81 (60%), Positives = 64/81 (79%)
Frame = +3
Query: 258 PVLRDVDTLGMADIEKKIKELAVKGCDGKLTVEDLTGGNFTITNGGVFGSLMSTPIINPP 437
PV+RD D + ADIEK I LA K +G L+++++ GG FTI+NGGV+GSL+STPIINPP
Sbjct: 317 PVIRDADNMNFADIEKGINALAKKATEGALSIDEMAGGTFTISNGGVYGSLISTPIINPP 376
Query: 438 QSAILGMHAIKDRPMAVNGQV 500
QSAILGMH+I RP+ V+G +
Sbjct: 377 QSAILGMHSIVQRPVVVDGNI 397
Score = 103 bits (248), Expect = 1e-22
Identities = 47/85 (55%), Positives = 63/85 (74%)
Frame = +1
Query: 1 KNSTAMLTTFNEVNMKPIMDLRKQYGEAFEKRHGIRLGFMSFYVKAVVEALKRYPEVNAS 180
+N+ AMLTTFNEV+M +M LR Y + F +HG++LG MS +VKA V AL+ P VNA
Sbjct: 231 QNTFAMLTTFNEVDMTNLMKLRSDYKDEFVTKHGVKLGLMSCFVKAAVTALQNQPIVNAV 290
Query: 181 IDGDDVVYHNYFDVSMAVSTPRGLV 255
IDGDD++Y +Y D+S+AV T +GLV
Sbjct: 291 IDGDDIIYRDYVDISVAVGTSKGLV 315
Score = 67.3 bits (157), Expect = 1e-11
Identities = 30/40 (75%), Positives = 36/40 (90%)
Frame = +2
Query: 509 PMMYLALSYDHRLIDGRESVGFLVTIKELLEDPTRLLLDV 628
PMMYLAL+YDHRLIDGRE+V FL IK+++EDP RLLLD+
Sbjct: 401 PMMYLALTYDHRLIDGREAVYFLRRIKDVVEDPRRLLLDI 440
>02_03_0404 +
18648632-18648669,18649319-18649379,18649449-18649476,
18649787-18649861,18649929-18649984,18650085-18650129,
18650224-18650475,18650586-18650680,18651114-18651204,
18651356-18651466,18651556-18651750,18651827-18652018
Length = 412
Score = 99 bits (238), Expect = 2e-21
Identities = 45/85 (52%), Positives = 61/85 (71%)
Frame = +1
Query: 1 KNSTAMLTTFNEVNMKPIMDLRKQYGEAFEKRHGIRLGFMSFYVKAVVEALKRYPEVNAS 180
+N+ AML TFNEV+M +M L Y + F ++HG++LG MS +VKA V AL+ P VNA
Sbjct: 203 QNTFAMLITFNEVDMTNLMKLLSDYKDQFVEKHGVKLGLMSCFVKAAVSALQNQPIVNAV 262
Query: 181 IDGDDVVYHNYFDVSMAVSTPRGLV 255
IDGDD++Y Y D+S+AV T +GLV
Sbjct: 263 IDGDDIIYREYIDISVAVGTSKGLV 287
Score = 99 bits (238), Expect = 2e-21
Identities = 45/80 (56%), Positives = 59/80 (73%)
Frame = +3
Query: 261 VLRDVDTLGMADIEKKIKELAVKGCDGKLTVEDLTGGNFTITNGGVFGSLMSTPIINPPQ 440
V+ D+D + ADIEK I LA K +G ++ ++ GG FTI+NGGV+GSL+STPIIN PQ
Sbjct: 290 VIHDIDAMNFADIEKGINNLAKKATEGAQSINNMAGGTFTISNGGVYGSLISTPIINSPQ 349
Query: 441 SAILGMHAIKDRPMAVNGQV 500
S+ILGMH+I R + VNG V
Sbjct: 350 SSILGMHSIVQRLVVVNGSV 369
Score = 66.1 bits (154), Expect = 2e-11
Identities = 30/40 (75%), Positives = 35/40 (87%)
Frame = +2
Query: 509 PMMYLALSYDHRLIDGRESVGFLVTIKELLEDPTRLLLDV 628
PMMYLAL YDHRLIDGRE+V FL IK+++EDP RLLLD+
Sbjct: 373 PMMYLALMYDHRLIDGREAVLFLRRIKDVVEDPRRLLLDI 412
>02_01_0041 + 279583-281622,281724-282047,282315-282443,282526-282648,
282768-282923,283224-283349,283426-283560,283815-283942,
284037-284148,284233-284547,284655-284771,284871-285166,
285252-285783,287980-288082,288808-288881,288965-289062,
289340-289380,289977-290032,290170-290244,290377-290469,
290602-290850,290930-291002,291681-291766,291853-291938,
292067-292142,292280-292347,292430-292496,292570-292665,
292741-292843,293214-293309,293396-293466
Length = 2047
Score = 71.7 bits (168), Expect = 5e-13
Identities = 39/85 (45%), Positives = 52/85 (61%), Gaps = 3/85 (3%)
Frame = +3
Query: 258 PVLRDVDTLGMADIEKKIKELAVKGCDGKLTVEDLTGGNFTITN-GGVFGSLMSTPIINP 434
PV+RD D G+ I +++K++A + D L ED GG FTI+N GG FG IINP
Sbjct: 1923 PVIRDADKKGLGTIAEEVKQVAQRARDNSLKPEDYEGGTFTISNLGGPFGIKQFCAIINP 1982
Query: 435 PQSAILGMHAIKDR--PMAVNGQVE 503
PQSAIL + + R P +V+GQ E
Sbjct: 1983 PQSAILAIGTAEKRVIPGSVDGQYE 2007
Score = 32.3 bits (70), Expect = 0.38
Identities = 15/36 (41%), Positives = 20/36 (55%)
Frame = +2
Query: 515 MYLALSYDHRLIDGRESVGFLVTIKELLEDPTRLLL 622
M +S DHR+IDG FL K +E+P +LL
Sbjct: 2012 MSATMSCDHRVIDGAIGAEFLKAFKGYIENPNSMLL 2047
>07_03_0044 -
12758606-12758676,12758765-12758860,12759197-12759299,
12759379-12759474,12759537-12759603,12759682-12759749,
12759898-12759973,12760112-12760197,12760285-12760361,
12761461-12761533,12761627-12761875,12761997-12762089,
12762218-12762292,12762661-12762716,12763473-12763513,
12763907-12764001,12764085-12764158,12765052-12765145,
12765484-12765519
Length = 541
Score = 71.3 bits (167), Expect = 7e-13
Identities = 39/85 (45%), Positives = 52/85 (61%), Gaps = 3/85 (3%)
Frame = +3
Query: 258 PVLRDVDTLGMADIEKKIKELAVKGCDGKLTVEDLTGGNFTITN-GGVFGSLMSTPIINP 434
PV+RD D G+ I +++K+LA + D L +D GG FTI+N GG FG IINP
Sbjct: 417 PVIRDADKKGLGMIAEEVKQLAQRARDNSLKPDDYEGGTFTISNLGGPFGIKQFCAIINP 476
Query: 435 PQSAILGMHAIKDR--PMAVNGQVE 503
PQSAIL + + + R P + NGQ E
Sbjct: 477 PQSAILAIGSAERRVIPGSANGQYE 501
Score = 34.3 bits (75), Expect = 0.093
Identities = 16/36 (44%), Positives = 21/36 (58%)
Frame = +2
Query: 515 MYLALSYDHRLIDGRESVGFLVTIKELLEDPTRLLL 622
M +S DHR+IDG FL K +E+PT +LL
Sbjct: 506 MSATMSCDHRVIDGAIGAEFLKAFKGYIENPTSMLL 541
>06_01_0037 -
369498-369568,369668-369760,369889-369991,370061-370156,
370227-370293,370379-370446,370606-370681,370890-370975,
371065-371150,371337-371409,371490-371735,371845-371937,
372045-372119,372496-372540,372631-372708,372805-372921,
373865-373894
Length = 500
Score = 70.9 bits (166), Expect = 9e-13
Identities = 37/85 (43%), Positives = 51/85 (60%), Gaps = 2/85 (2%)
Frame = +3
Query: 258 PVLRDVDTLGMADIEKKIKELAVKGCDGKLTVEDLTGGNFTITN-GGVFGSLMSTPIINP 434
PV+RD D G+A I ++K+LA + D L ED GG FT++N GG FG I+NP
Sbjct: 377 PVIRDADKKGLATIADEVKQLAQRARDNSLKPEDYEGGTFTVSNLGGPFGIKQFCAIVNP 436
Query: 435 PQSAILGMHAIKDRPM-AVNGQVEI 506
PQSAIL + + + R + GQ E+
Sbjct: 437 PQSAILAIGSAEKRVIPGAEGQFEV 461
Score = 32.3 bits (70), Expect = 0.38
Identities = 15/36 (41%), Positives = 21/36 (58%)
Frame = +2
Query: 515 MYLALSYDHRLIDGRESVGFLVTIKELLEDPTRLLL 622
M LS DHR+IDG ++ K +E+PT +LL
Sbjct: 465 MSATLSCDHRVIDGAIGAEWMKAFKGYIENPTTMLL 500
>01_03_0030 -
11787280-11787393,11787487-11787714,11788828-11788916,
11789516-11789763,11789858-11790146,11790295-11790454,
11791228-11791404
Length = 434
Score = 52.4 bits (120), Expect = 3e-07
Identities = 22/74 (29%), Positives = 42/74 (56%)
Frame = +3
Query: 258 PVLRDVDTLGMADIEKKIKELAVKGCDGKLTVEDLTGGNFTITNGGVFGSLMSTPIINPP 437
P +++V +L + +I K++ L +L+ ED+ GG T++N G G +P++N P
Sbjct: 309 PNIKNVQSLSILEITKELSRLHEMASHNRLSTEDIAGGTITLSNIGAIGGKFGSPLLNLP 368
Query: 438 QSAILGMHAIKDRP 479
+ AI+ + I+ P
Sbjct: 369 EVAIIALGRIQKLP 382
Score = 29.9 bits (64), Expect = 2.0
Identities = 14/29 (48%), Positives = 17/29 (58%)
Frame = +2
Query: 536 DHRLIDGRESVGFLVTIKELLEDPTRLLL 622
DHR++DG F K L+E P RLLL
Sbjct: 403 DHRVVDGATVARFCNEWKSLVEKPERLLL 431
>08_02_0759 -
20851828-20851932,20852190-20852285,20853231-20853314,
20853411-20853481,20853568-20853655,20853745-20853936,
20854044-20854931
Length = 507
Score = 46.4 bits (105), Expect = 2e-05
Identities = 27/77 (35%), Positives = 40/77 (51%)
Frame = +3
Query: 255 TPVLRDVDTLGMADIEKKIKELAVKGCDGKLTVEDLTGGNFTITNGGVFGSLMSTPIINP 434
TPVL D D L + + +K KEL K +L + + G FT++N G+FG I+ P
Sbjct: 352 TPVLEDADKLDIYLLSQKWKELVKKARAKQLQPNEYSSGTFTLSNLGMFGVDRFDAILPP 411
Query: 435 PQSAILGMHAIKDRPMA 485
Q I+ + A K +A
Sbjct: 412 GQGGIMAVGASKPTVVA 428
Score = 32.7 bits (71), Expect = 0.28
Identities = 19/60 (31%), Positives = 30/60 (50%), Gaps = 1/60 (1%)
Frame = +1
Query: 79 EAFEKRHGIRLGFMSFYVKAVVEALKRYPEVNASI-DGDDVVYHNYFDVSMAVSTPRGLV 255
E +EK + KA AL ++P VNAS DG Y+ ++++AV+ GL+
Sbjct: 292 ELYEKVKSKGVTMTVLLAKAAAMALAQHPVVNASCRDGKSFTYNTNINIAVAVAIDGGLI 351
Score = 30.7 bits (66), Expect = 1.1
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = +2
Query: 536 DHRLIDGRESVGFLVTIKELLEDPTRLLL 622
DHR++ G + FL T +++EDP L L
Sbjct: 479 DHRIVYGADLAAFLQTFAKIIEDPESLTL 507
>09_04_0081 -
14400293-14400397,14400953-14401036,14401144-14401214,
14401293-14401380,14401487-14401678,14401772-14402704
Length = 490
Score = 42.7 bits (96), Expect = 3e-04
Identities = 24/68 (35%), Positives = 38/68 (55%)
Frame = +3
Query: 255 TPVLRDVDTLGMADIEKKIKELAVKGCDGKLTVEDLTGGNFTITNGGVFGSLMSTPIINP 434
TPVL DVD L + + +K + L K +L ++ + G FT++N G+FG I+ P
Sbjct: 367 TPVLEDVDKLDVYLLAQKWRGLLKKARMKQLQPDEYSSGTFTLSNLGMFGVDRFDAILPP 426
Query: 435 PQSAILGM 458
Q AI+ +
Sbjct: 427 GQGAIMAV 434
Score = 32.3 bits (70), Expect = 0.38
Identities = 14/36 (38%), Positives = 22/36 (61%)
Frame = +2
Query: 515 MYLALSYDHRLIDGRESVGFLVTIKELLEDPTRLLL 622
M + ++ DHR+I G + FL T +++EDP L L
Sbjct: 455 MLVNVTADHRIIYGADLAAFLQTFAKIIEDPESLTL 490
Score = 31.9 bits (69), Expect = 0.50
Identities = 17/43 (39%), Positives = 27/43 (62%), Gaps = 1/43 (2%)
Frame = +1
Query: 130 VKAVVEALKRYPEVNASI-DGDDVVYHNYFDVSMAVSTPRGLV 255
VKA AL ++P VNAS DG Y++ ++++AV+ GL+
Sbjct: 324 VKAAAMALTQHPVVNASCRDGKSFSYNSSINIAVAVAIEGGLL 366
>06_03_0163 -
17380601-17380710,17380796-17380856,17381076-17381150,
17381538-17381600,17381679-17381755,17382432-17382515,
17382610-17382654,17382729-17382789,17383658-17384053,
17384220-17384289,17387010-17387083,17387202-17387246,
17387342-17387391,17387846-17387947,17388587-17388620,
17388681-17388758,17388915-17388965,17389082-17389085,
17389182-17389256,17389530-17389624
Length = 549
Score = 41.1 bits (92), Expect = 8e-04
Identities = 26/87 (29%), Positives = 44/87 (50%), Gaps = 2/87 (2%)
Frame = +1
Query: 1 KNSTAMLTTFNEVNMKPIMDLRKQYGEAFEKRHGIRLGFMSFYVKAVVEALKRYPEVNAS 180
K +T L +V + P++ R + E +HG+++ +KAV AL+ PE NA
Sbjct: 368 KQTTPHLYLSQDVILDPLLAFRNELKE----QHGVKVSVNDIVIKAVALALRNVPEANAY 423
Query: 181 IDGDDVVYHN--YFDVSMAVSTPRGLV 255
+ D D+S+AV+T +GL+
Sbjct: 424 WNNDKEQAQKCVSVDISIAVATEKGLM 450
Score = 36.3 bits (80), Expect = 0.023
Identities = 19/60 (31%), Positives = 30/60 (50%)
Frame = +3
Query: 255 TPVLRDVDTLGMADIEKKIKELAVKGCDGKLTVEDLTGGNFTITNGGVFGSLMSTPIINP 434
TP++R+ D ++ I ++K+LA K GKL + GG F + G+ II P
Sbjct: 451 TPIIRNADQKTISAISSEVKQLAEKARAGKLAPNEFQGGTF--RHSGILAVGRGNKIIEP 508
>12_01_0526 -
4171313-4171417,4171514-4171597,4171688-4171758,
4171814-4171891,4174482-4174569,4174659-4174850,
4174939-4175802
Length = 493
Score = 31.5 bits (68), Expect = 0.66
Identities = 13/34 (38%), Positives = 22/34 (64%)
Frame = +2
Query: 515 MYLALSYDHRLIDGRESVGFLVTIKELLEDPTRL 616
M + ++ DHR+I G + FL T+ +++EDP L
Sbjct: 458 MQVNVTADHRVIYGADLAAFLQTLSKIIEDPKDL 491
>08_01_0945 +
9376997-9377818,9378065-9378373,9379510-9379800,
9380060-9380173,9380280-9380981
Length = 745
Score = 30.7 bits (66), Expect = 1.1
Identities = 22/68 (32%), Positives = 27/68 (39%)
Frame = +2
Query: 176 LLSTAMTWFTTTISTSAWRFLRRAAWYAGSA*CRYPRHGRHREENQRAGSQRM*RQADR* 355
LLS AM F T W F R AA R P H +H E+ R R ++
Sbjct: 119 LLSLAMLAFETVAHLKGWHFPRSAAGLPEKYLRRLPEHLQHLPEHLRRHLPEHLRMPEKE 178
Query: 356 RSDRW*LH 379
+ W LH
Sbjct: 179 EIEGW-LH 185
>03_05_0759 - 27500941-27501568,27503540-27504154,27504228-27504598
Length = 537
Score = 29.5 bits (63), Expect = 2.6
Identities = 19/57 (33%), Positives = 25/57 (43%)
Frame = -1
Query: 364 VRSSTVSLPSHPLTASSLIFFSMSAMPRVSTSRRTGVPGRAA*KPPC*RRNSCGKPR 194
V +T +LPS P +SS FS P V++S R PP +S PR
Sbjct: 397 VEETTTTLPSTPSPSSSPQCFSTQTRPLVASSNYGSSTRRTRSTPPTSSASSMTSPR 453
>10_08_0903 -
21459932-21460201,21460660-21460993,21461126-21461373,
21461508-21461762
Length = 368
Score = 28.3 bits (60), Expect = 6.1
Identities = 12/25 (48%), Positives = 16/25 (64%)
Frame = +1
Query: 511 DDVPGAVLRSPSDRWSRIRGLPGND 585
+DVPG +RSP RW + G P +D
Sbjct: 244 NDVPGLQIRSPGGRWLAV-GAPPDD 267
>03_01_0318 - 2495617-2497788
Length = 723
Score = 28.3 bits (60), Expect = 6.1
Identities = 16/51 (31%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
Frame = +3
Query: 240 AARPGTPVLRDVDTLGMADIEKKIKELA-VKGCDGKLTVEDLTGGNFTITN 389
A+ P T D + + + + +K LA G GKL +L+G FT++N
Sbjct: 392 ASAPATAAPTDTNLMAVKQSLRVVKRLASTTGTTGKLLRRELSGIVFTVSN 442
>01_05_0693 - 24339917-24340524,24340778-24341252
Length = 360
Score = 28.3 bits (60), Expect = 6.1
Identities = 14/41 (34%), Positives = 17/41 (41%)
Frame = +2
Query: 383 HQRWCVRFPDVYADHQPAAERNSGYARYQRSSDGGEWSG*D 505
H+RW RF YAD A R +A D +G D
Sbjct: 43 HERWMARFGRAYADAAEKARRMEVFAANAERVDAANRAGGD 83
>08_02_1460 +
27295201-27295269,27295968-27296074,27296252-27296384,
27296621-27296714,27296828-27297030,27297167-27297240,
27297331-27297406,27297530-27297585,27297939-27298026,
27298115-27298255,27298338-27298487,27299015-27299221
Length = 465
Score = 27.9 bits (59), Expect = 8.1
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = +3
Query: 249 PGTPVLRDVDTLGMADIEKKIKELAVKGCDG 341
PGT L VD++ +KK E +KGC+G
Sbjct: 430 PGTFYLTKVDSMYRRFYDKKAAEGKIKGCNG 460
>07_03_0382 + 17470508-17470807,17471449-17474517
Length = 1122
Score = 27.9 bits (59), Expect = 8.1
Identities = 20/57 (35%), Positives = 27/57 (47%)
Frame = -1
Query: 436 GGLMIGVDIREPNTPPLVMVKLPPVRSSTVSLPSHPLTASSLIFFSMSAMPRVSTSR 266
G + I E N PP+V+ V +S+P H + SS I S M R+ST R
Sbjct: 1013 GDFHVDQRIGEINKPPVVLGHGTAVGG--LSIPDHSVEISSQIGVSRVPMNRISTLR 1067
>04_04_0456 -
25355409-25355751,25356047-25356205,25356317-25356513,
25356602-25356794,25357044-25358287
Length = 711
Score = 27.9 bits (59), Expect = 8.1
Identities = 25/77 (32%), Positives = 34/77 (44%), Gaps = 17/77 (22%)
Frame = -3
Query: 689 LPEKAIMPYP-VYSAG------ET*TTTRPAADASDLPATL*SLPGSPRIRDHRS----- 546
LP +++ P+P + AG T T+ A+ S LPA PR+ D RS
Sbjct: 130 LPRRSLPPHPPIPPAGGGADLRNTARRTQSGAEGSGLPAPAAEQTAKPRVSDLRSGAGNA 189
Query: 545 -----DGDRRTAPGTSS 510
DGD+R GT S
Sbjct: 190 TVGDVDGDQRVGNGTRS 206
>02_05_0686 - 30900748-30902167,30903442-30904742
Length = 906
Score = 27.9 bits (59), Expect = 8.1
Identities = 22/69 (31%), Positives = 35/69 (50%), Gaps = 5/69 (7%)
Frame = +3
Query: 240 AARPGTPVLRDVDTLGMADIEKKIKELA-----VKGCDGKLTVEDLTGGNFTITNGGVFG 404
A+RP P V T G AD + K+K L V D + +++TGG+F + + G+
Sbjct: 386 ASRP--PAAPGVPT-GSADQQAKLKPLHWDKVNVAATDHSMVWDNITGGSFNL-DEGIIE 441
Query: 405 SLMSTPIIN 431
+L T +N
Sbjct: 442 ALFGTAAVN 450
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,289,890
Number of Sequences: 37544
Number of extensions: 495673
Number of successful extensions: 1516
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 1454
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1512
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1768474200
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -