Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0387
(694 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF047653-6|AAC04462.2| 463|Caenorhabditis elegans Hypothetical ... 112 2e-25
Z81044-2|CAB02813.1| 337|Caenorhabditis elegans Hypothetical pr... 72 5e-13
Z77659-4|CAB01163.1| 507|Caenorhabditis elegans Hypothetical pr... 64 7e-11
Z37093-3|CAA85465.1| 448|Caenorhabditis elegans Hypothetical pr... 50 1e-06
U61955-6|AAC24408.2| 505|Caenorhabditis elegans Hypothetical pr... 28 7.3
AL021175-6|CAA15968.1| 363|Caenorhabditis elegans Hypothetical ... 28 7.3
Z81516-2|CAB04200.1| 223|Caenorhabditis elegans Hypothetical pr... 27 9.6
Z80219-7|CAN86594.1| 804|Caenorhabditis elegans Hypothetical pr... 27 9.6
Z80219-5|CAB02302.2| 784|Caenorhabditis elegans Hypothetical pr... 27 9.6
Z78198-7|CAB01573.1| 622|Caenorhabditis elegans Hypothetical pr... 27 9.6
Z75546-12|CAN86896.1| 804|Caenorhabditis elegans Hypothetical p... 27 9.6
Z75546-10|CAA99896.2| 784|Caenorhabditis elegans Hypothetical p... 27 9.6
U64848-14|AAB04890.1| 382|Caenorhabditis elegans Hypothetical p... 27 9.6
>AF047653-6|AAC04462.2| 463|Caenorhabditis elegans Hypothetical
protein W02F12.5 protein.
Length = 463
Score = 112 bits (270), Expect = 2e-25
Identities = 52/83 (62%), Positives = 64/83 (77%)
Frame = +3
Query: 258 PVLRDVDTLGMADIEKKIKELAVKGCDGKLTVEDLTGGNFTITNGGVFGSLMSTPIINPP 437
PVLR+V+++ A IE ++ L VK DGKL VED+ GG FTI+NGGVFGS+ TPIINPP
Sbjct: 340 PVLRNVESMNYAQIELELANLGVKARDGKLAVEDMEGGTFTISNGGVFGSMFGTPIINPP 399
Query: 438 QSAILGMHAIKDRPMAVNGQVEI 506
QSAILGMH + DR + VNG+ EI
Sbjct: 400 QSAILGMHGVFDRVVPVNGKPEI 422
Score = 94.7 bits (225), Expect = 6e-20
Identities = 40/85 (47%), Positives = 65/85 (76%)
Frame = +1
Query: 1 KNSTAMLTTFNEVNMKPIMDLRKQYGEAFEKRHGIRLGFMSFYVKAVVEALKRYPEVNAS 180
+N+ AMLTTFNE++M ++++RK Y + F +HG++LG MS +V+A AL+ P VNA
Sbjct: 254 QNTYAMLTTFNEIDMSSLIEMRKTYQKDFVAKHGVKLGMMSPFVRAAAYALQESPVVNAV 313
Query: 181 IDGDDVVYHNYFDVSMAVSTPRGLV 255
+D +++VY ++ D+S+AV+TP+GLV
Sbjct: 314 LDENEIVYRHFVDISVAVATPKGLV 338
Score = 51.2 bits (117), Expect = 7e-07
Identities = 22/40 (55%), Positives = 31/40 (77%)
Frame = +2
Query: 509 PMMYLALSYDHRLIDGRESVGFLVTIKELLEDPTRLLLDV 628
P+M +AL+YDHRLIDGRE+V FL IK +EDP + +++
Sbjct: 424 PIMQIALTYDHRLIDGREAVTFLKKIKTAVEDPRIMFMNL 463
>Z81044-2|CAB02813.1| 337|Caenorhabditis elegans Hypothetical
protein C30H6.7 protein.
Length = 337
Score = 71.7 bits (168), Expect = 5e-13
Identities = 36/84 (42%), Positives = 55/84 (65%), Gaps = 1/84 (1%)
Frame = +3
Query: 255 TPVLRDVDTLGMADIEKKIKELAVKGCDGKLTVEDLTGGNFTITNGGVFGSLMS-TPIIN 431
TP++ + D LG+ I K+KEL+ + KL + GG+FTI+N G+FGS+ + T IIN
Sbjct: 199 TPIVENSDILGVLAISSKVKELSGLARESKLKPQQFQGGSFTISNLGMFGSVTNFTAIIN 258
Query: 432 PPQSAILGMHAIKDRPMAVNGQVE 503
PPQ AIL + + ++V+GQ+E
Sbjct: 259 PPQCAILTIGGTRSEVVSVDGQLE 282
Score = 33.9 bits (74), Expect = 0.11
Identities = 18/55 (32%), Positives = 29/55 (52%)
Frame = +1
Query: 91 KRHGIRLGFMSFYVKAVVEALKRYPEVNASIDGDDVVYHNYFDVSMAVSTPRGLV 255
K+ G + F +KA AL+ P VN + + + D+S+AV+TP GL+
Sbjct: 145 KKSGTAVSLNDFIIKAAALALRSVPTVNVRWTPEGIGLGSV-DISVAVATPTGLI 198
>Z77659-4|CAB01163.1| 507|Caenorhabditis elegans Hypothetical
protein F23B12.5 protein.
Length = 507
Score = 64.5 bits (150), Expect = 7e-11
Identities = 32/75 (42%), Positives = 46/75 (61%), Gaps = 1/75 (1%)
Frame = +3
Query: 255 TPVLRDVDTLGMADIEKKIKELAVKGCDGKLTVEDLTGGNFTITNGGVFGSLMS-TPIIN 431
TP++ + G+A I +I ELA + +GKL + GG FT++N G+FGS+ T IIN
Sbjct: 383 TPIIFNAHAKGLATIASEIVELAQRAREGKLQPHEFQGGTFTVSNLGMFGSVSDFTAIIN 442
Query: 432 PPQSAILGMHAIKDR 476
PPQS IL + D+
Sbjct: 443 PPQSCILAIGGASDK 457
Score = 37.9 bits (84), Expect = 0.007
Identities = 21/78 (26%), Positives = 40/78 (51%), Gaps = 3/78 (3%)
Frame = +1
Query: 31 NEVNMKPIMDLRKQYGEAFEKR---HGIRLGFMSFYVKAVVEALKRYPEVNASIDGDDVV 201
+E+ + ++ +R++ K ++ F +KA A +R PE N+ +
Sbjct: 305 SEIQLDTLLQVREKLNGLLAKGTSGQATKISINDFIIKASALACQRVPEANSYWMDSFIR 364
Query: 202 YHNYFDVSMAVSTPRGLV 255
+++ DVS+AVSTP GL+
Sbjct: 365 ENHHVDVSVAVSTPAGLI 382
Score = 31.9 bits (69), Expect = 0.45
Identities = 16/36 (44%), Positives = 20/36 (55%)
Frame = +2
Query: 515 MYLALSYDHRLIDGRESVGFLVTIKELLEDPTRLLL 622
M + LS DHR +DG +L KE LE P +LL
Sbjct: 472 MKVTLSCDHRTVDGAVGAVWLRHFKEFLEKPHTMLL 507
>Z37093-3|CAA85465.1| 448|Caenorhabditis elegans Hypothetical
protein ZK669.4 protein.
Length = 448
Score = 50.4 bits (115), Expect = 1e-06
Identities = 25/77 (32%), Positives = 48/77 (62%), Gaps = 2/77 (2%)
Frame = +1
Query: 31 NEVNMKPIMDLRKQYGEAFEKRHGIRLGFMSFYVKAVVEALKRYPEVNASIDG--DDVVY 204
+E+N+ ++ R + E ++RH I+L +M F++KA AL YP +N++ D ++V++
Sbjct: 246 DEINVDSLVKYRAELKEFAKERH-IKLSYMPFFIKAASLALLEYPSLNSTTDEKMENVIH 304
Query: 205 HNYFDVSMAVSTPRGLV 255
++ +A+ TP GLV
Sbjct: 305 KASHNICLAMDTPGGLV 321
Score = 41.1 bits (92), Expect = 7e-04
Identities = 20/74 (27%), Positives = 40/74 (54%)
Frame = +3
Query: 258 PVLRDVDTLGMADIEKKIKELAVKGCDGKLTVEDLTGGNFTITNGGVFGSLMSTPIINPP 437
P +++ + + +I +++ L G ++ EDL G F+++N G G ++P++ PP
Sbjct: 323 PNIKNCEQRSIFEIAQELNRLLEAGKKQQIKREDLIDGTFSLSNIGNIGGTYASPVVFPP 382
Query: 438 QSAILGMHAIKDRP 479
Q AI + I+ P
Sbjct: 383 QVAIGAIGKIEKLP 396
>U61955-6|AAC24408.2| 505|Caenorhabditis elegans Hypothetical
protein M03D4.4a protein.
Length = 505
Score = 27.9 bits (59), Expect = 7.3
Identities = 17/51 (33%), Positives = 26/51 (50%), Gaps = 2/51 (3%)
Frame = -3
Query: 443 ALRRVDDRRRHQGTEHTTV--GDGEVTTGQIFNGQLAVTSFDCQLFDFLLD 297
A +D+ +RH+ EH TV GD E + + +LA+ + DFL D
Sbjct: 13 AFHSLDELQRHEREEHETVEQGDQEEDRMEDDSDELAMIKIKIEDSDFLSD 63
>AL021175-6|CAA15968.1| 363|Caenorhabditis elegans Hypothetical
protein Y6E2A.7 protein.
Length = 363
Score = 27.9 bits (59), Expect = 7.3
Identities = 15/57 (26%), Positives = 28/57 (49%)
Frame = +1
Query: 88 EKRHGIRLGFMSFYVKAVVEALKRYPEVNASIDGDDVVYHNYFDVSMAVSTPRGLVR 258
+KR + FYV +++E L+ ++ I+GDD + Y+ S A G ++
Sbjct: 128 QKRWSKMFEYCKFYVDSILEQLRTQYHLDIRIEGDDGKF--YYTFSDAEKKKNGRIK 182
>Z81516-2|CAB04200.1| 223|Caenorhabditis elegans Hypothetical
protein F26H9.4 protein.
Length = 223
Score = 27.5 bits (58), Expect = 9.6
Identities = 10/23 (43%), Positives = 16/23 (69%)
Frame = +3
Query: 621 WTCSSLSFTCTVDRIRHYRLLRQ 689
W C+ ++T T+D +RH+R L Q
Sbjct: 80 WECTRTTWTRTIDVLRHHRELVQ 102
>Z80219-7|CAN86594.1| 804|Caenorhabditis elegans Hypothetical
protein T01H8.1e protein.
Length = 804
Score = 27.5 bits (58), Expect = 9.6
Identities = 12/31 (38%), Positives = 15/31 (48%)
Frame = -3
Query: 578 PGSPRIRDHRSDGDRRTAPGTSSEDLNLTIH 486
PG + +DHR D R+ P S D T H
Sbjct: 22 PGIDQCKDHRMDVSMRSDPTDCSSDTTNTFH 52
>Z80219-5|CAB02302.2| 784|Caenorhabditis elegans Hypothetical
protein T01H8.1a protein.
Length = 784
Score = 27.5 bits (58), Expect = 9.6
Identities = 12/31 (38%), Positives = 15/31 (48%)
Frame = -3
Query: 578 PGSPRIRDHRSDGDRRTAPGTSSEDLNLTIH 486
PG + +DHR D R+ P S D T H
Sbjct: 28 PGIDQCKDHRMDVSMRSDPTDCSSDTTNTFH 58
>Z78198-7|CAB01573.1| 622|Caenorhabditis elegans Hypothetical
protein F55C5.8 protein.
Length = 622
Score = 27.5 bits (58), Expect = 9.6
Identities = 17/58 (29%), Positives = 26/58 (44%)
Frame = +1
Query: 13 AMLTTFNEVNMKPIMDLRKQYGEAFEKRHGIRLGFMSFYVKAVVEALKRYPEVNASID 186
+++ + EV P D K +AFE + F FY+ + AL +Y E A D
Sbjct: 384 SVIEIYKEVAEIPGADHDKNLIQAFEVKVEYYRAFRCFYMASSYSALHKYSEAAALFD 441
>Z75546-12|CAN86896.1| 804|Caenorhabditis elegans Hypothetical
protein T01H8.1e protein.
Length = 804
Score = 27.5 bits (58), Expect = 9.6
Identities = 12/31 (38%), Positives = 15/31 (48%)
Frame = -3
Query: 578 PGSPRIRDHRSDGDRRTAPGTSSEDLNLTIH 486
PG + +DHR D R+ P S D T H
Sbjct: 22 PGIDQCKDHRMDVSMRSDPTDCSSDTTNTFH 52
>Z75546-10|CAA99896.2| 784|Caenorhabditis elegans Hypothetical
protein T01H8.1a protein.
Length = 784
Score = 27.5 bits (58), Expect = 9.6
Identities = 12/31 (38%), Positives = 15/31 (48%)
Frame = -3
Query: 578 PGSPRIRDHRSDGDRRTAPGTSSEDLNLTIH 486
PG + +DHR D R+ P S D T H
Sbjct: 28 PGIDQCKDHRMDVSMRSDPTDCSSDTTNTFH 58
>U64848-14|AAB04890.1| 382|Caenorhabditis elegans Hypothetical
protein C50E3.12 protein.
Length = 382
Score = 27.5 bits (58), Expect = 9.6
Identities = 12/27 (44%), Positives = 14/27 (51%)
Frame = +2
Query: 410 DVYADHQPAAERNSGYARYQRSSDGGE 490
D YAD N GY R +R SDG +
Sbjct: 340 DEYADDHQEGPSNRGYKRPRRDSDGDD 366
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,596,790
Number of Sequences: 27780
Number of extensions: 369410
Number of successful extensions: 1046
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1006
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1044
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1592382278
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -