Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0386
         (743 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    23   2.6  
U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse ...    22   4.5  
AY600513-1|AAT11861.1|  314|Tribolium castaneum spalt-like prote...    22   6.0  
AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    22   6.0  

>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
           protein.
          Length = 2700

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 9/20 (45%), Positives = 11/20 (55%)
 Frame = +1

Query: 493 LGP*SCMHHKYSETDADPHN 552
           L P +C H  Y+    DPHN
Sbjct: 199 LDPFACTHVIYAFATIDPHN 218


>U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse
           transcriptase andRNase H protein.
          Length = 712

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 7/18 (38%), Positives = 12/18 (66%)
 Frame = +1

Query: 610 EIKAKGHTVDVNDLRNDP 663
           E+K  GH + +N ++ DP
Sbjct: 500 EVKFLGHILTINGIKADP 517


>AY600513-1|AAT11861.1|  314|Tribolium castaneum spalt-like protein
           protein.
          Length = 314

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = +1

Query: 487 SGLGP*SCMHHKYSETDADPHNA 555
           S LG    M+HKY + D + H +
Sbjct: 264 SPLGHTLSMNHKYEKIDKEEHES 286


>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory receptor
           candidate 59 protein.
          Length = 489

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 10/32 (31%), Positives = 15/32 (46%)
 Frame = -2

Query: 436 WQPSFIGLVCPKSVRASCDTQSRTQVQKYGEY 341
           W  S + L+CP+S+      Q R    K  +Y
Sbjct: 14  WFLSKLFLLCPRSIDEKIKRQERHSFYKIYKY 45


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 203,859
Number of Sequences: 336
Number of extensions: 5070
Number of successful extensions: 12
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 19819879
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)