Bombyx BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0386
         (743 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_25798| Best HMM Match : FA_desaturase (HMM E-Value=0)              110   1e-24
SB_12261| Best HMM Match : No HMM Matches (HMM E-Value=.)              30   2.3  
SB_8902| Best HMM Match : DUF1070 (HMM E-Value=0.76)                   30   2.3  
SB_44412| Best HMM Match : DUF1070 (HMM E-Value=0.76)                  30   2.3  
SB_11417| Best HMM Match : zf-TAZ (HMM E-Value=0.91)                   29   5.3  
SB_18299| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   5.3  
SB_2252| Best HMM Match : No HMM Matches (HMM E-Value=.)               28   7.0  
SB_18635| Best HMM Match : 7tm_1 (HMM E-Value=8.54792e-44)             28   9.2  

>SB_25798| Best HMM Match : FA_desaturase (HMM E-Value=0)
          Length = 268

 Score =  110 bits (265), Expect = 1e-24
 Identities = 43/77 (55%), Positives = 61/77 (79%)
 Frame = +1

Query: 511 MHHKYSETDADPHNATRGFFFSHIGWLLLRKHPEIKAKGHTVDVNDLRNDPILRFQKKYY 690
           +HHKYSETDADPHNA RGFFFSH+GWL+ RKHP++  KG  +D++DL  D ++ FQ+++Y
Sbjct: 64  VHHKYSETDADPHNAKRGFFFSHVGWLMQRKHPDVIRKGKGIDLSDLYADSVVMFQRRHY 123

Query: 691 QILMPLACFIMPTYVPT 741
           + +  L C ++PT VP+
Sbjct: 124 KKISMLMCVLIPTLVPS 140



 Score = 71.7 bits (168), Expect = 6e-13
 Identities = 26/51 (50%), Positives = 41/51 (80%)
 Frame = +2

Query: 356 LYLCSGLGITAGAHRLWAHKSYKARLPLRILLTIFNTIAFQDAVVDWARDH 508
           L LC G G+T GAHRLWAH+++KA+ PLR+++ + N++A Q+ + +W+RDH
Sbjct: 12  LSLCRGYGVTIGAHRLWAHRTFKAKWPLRLVIMLMNSMAAQNDIFEWSRDH 62


>SB_12261| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 430

 Score = 29.9 bits (64), Expect = 2.3
 Identities = 16/36 (44%), Positives = 18/36 (50%), Gaps = 1/36 (2%)
 Frame = -3

Query: 648 IIH-VDGMAFGFDFGMLPQQQPANVGKEESSGCVVG 544
           ++H V G  FG DF       PAN G E S  C VG
Sbjct: 339 VVHGVRGGVFGEDFAQHLAPNPANTGDEASYDCGVG 374


>SB_8902| Best HMM Match : DUF1070 (HMM E-Value=0.76)
          Length = 544

 Score = 29.9 bits (64), Expect = 2.3
 Identities = 16/36 (44%), Positives = 18/36 (50%), Gaps = 1/36 (2%)
 Frame = -3

Query: 648 IIH-VDGMAFGFDFGMLPQQQPANVGKEESSGCVVG 544
           ++H V G  FG DF       PAN G E S  C VG
Sbjct: 305 VVHGVRGGVFGEDFAQHLAPNPANTGDEASYDCGVG 340


>SB_44412| Best HMM Match : DUF1070 (HMM E-Value=0.76)
          Length = 632

 Score = 29.9 bits (64), Expect = 2.3
 Identities = 16/36 (44%), Positives = 18/36 (50%), Gaps = 1/36 (2%)
 Frame = -3

Query: 648 IIH-VDGMAFGFDFGMLPQQQPANVGKEESSGCVVG 544
           ++H V G  FG DF       PAN G E S  C VG
Sbjct: 541 VVHGVRGGVFGEDFAQHLAPNPANTGDEASYDCGVG 576


>SB_11417| Best HMM Match : zf-TAZ (HMM E-Value=0.91)
          Length = 390

 Score = 28.7 bits (61), Expect = 5.3
 Identities = 15/32 (46%), Positives = 15/32 (46%)
 Frame = -3

Query: 639 VDGMAFGFDFGMLPQQQPANVGKEESSGCVVG 544
           V G  FG DF       PAN G E S  C VG
Sbjct: 155 VRGGVFGEDFAQHLAPNPANTGDEASYDCGVG 186


>SB_18299| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 698

 Score = 28.7 bits (61), Expect = 5.3
 Identities = 14/31 (45%), Positives = 14/31 (45%)
 Frame = +1

Query: 466 YRFSGCRSGLGP*SCMHHKYSETDADPHNAT 558
           Y  SGC SG GP  C  H       D H AT
Sbjct: 628 YGKSGCSSGTGPLPCDTHSTITYRQDQHGAT 658


>SB_2252| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 149

 Score = 28.3 bits (60), Expect = 7.0
 Identities = 13/40 (32%), Positives = 19/40 (47%)
 Frame = -2

Query: 388 SCDTQSRTQVQKYGEYRSPPHGFEKEQVPSINTTDMQNKE 269
           SC   + T  Q + +Y+  P   +KE  P  +  D  NKE
Sbjct: 68  SCKGPTNTWSQAHYQYKGVPELLQKEPTPPKSGPDQNNKE 107


>SB_18635| Best HMM Match : 7tm_1 (HMM E-Value=8.54792e-44)
          Length = 350

 Score = 27.9 bits (59), Expect = 9.2
 Identities = 10/28 (35%), Positives = 17/28 (60%)
 Frame = +2

Query: 338 SIFAIFLYLCSGLGITAGAHRLWAHKSY 421
           ++F I +     LG+++  H  WAHK+Y
Sbjct: 148 AVFVIIVAWALALGVSSLIHVTWAHKAY 175


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,886,865
Number of Sequences: 59808
Number of extensions: 664683
Number of successful extensions: 1742
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1556
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1740
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 2010148439
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)