Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0385
         (676 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

05_01_0019 - 129767-129931,130078-130257,130491-130728,130833-13...    29   2.6  
03_05_1117 - 30526126-30526640,30527114-30527186,30527310-305278...    28   7.8  

>05_01_0019 -
           129767-129931,130078-130257,130491-130728,130833-131236,
           131284-131427,131709-131995,132071-132150,132563-132714,
           132793-132909,133292-133450,133546-133946,134106-134423,
           135050-135095,135203-135310
          Length = 932

 Score = 29.5 bits (63), Expect = 2.6
 Identities = 15/36 (41%), Positives = 22/36 (61%)
 Frame = +2

Query: 272 HK*TKNV*TNPRVYKRDETGASHAGDPGVYEGQIYR 379
           HK +K+V  +P + K    GA+HAGDP    GQ ++
Sbjct: 50  HKGSKSVFASP-LEKIQPNGANHAGDPETPGGQAFK 84


>03_05_1117 -
           30526126-30526640,30527114-30527186,30527310-30527848,
           30528215-30528332
          Length = 414

 Score = 27.9 bits (59), Expect = 7.8
 Identities = 13/40 (32%), Positives = 25/40 (62%)
 Frame = +3

Query: 549 RDSAAPLSCGISISKVWKIQ*SL*KASVVNATAT**ISPA 668
           R + A L CG+ +++VWK++      + +N+T +  +SPA
Sbjct: 214 RSAMAKLKCGVDLAEVWKME-----DNGINSTPSAEVSPA 248


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,905,349
Number of Sequences: 37544
Number of extensions: 305296
Number of successful extensions: 565
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 554
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 565
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1714968940
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)