Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0385
         (676 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.         24   5.0  
AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodi...    24   5.0  
AY578812-1|AAT07317.1|  932|Anopheles gambiae wishful thinking p...    23   8.8  

>AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.
          Length = 2259

 Score = 23.8 bits (49), Expect = 5.0
 Identities = 8/19 (42%), Positives = 13/19 (68%)
 Frame = -3

Query: 245 TSLYTHRIRMDLFCRVPKK 189
           T  Y + IRM+L C +P++
Sbjct: 850 TVAYLYHIRMELICPIPEE 868


>AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodium
            channel alpha subunitprotein.
          Length = 2139

 Score = 23.8 bits (49), Expect = 5.0
 Identities = 13/62 (20%), Positives = 31/62 (50%)
 Frame = +1

Query: 7    TGRRQNN*IIILIHYRDKII*INQKKCNSIFAINIKYYQNSIVPIYTSECV*RSFINKII 186
            T ++ +  I++ I +    + ++  K +  F+  + Y     + I++SEC+ + F  +  
Sbjct: 1621 TNKKFDMIIMLFIGFNMLTMTLDHYKQSETFSAVLDYLNMIFICIFSSECLMKIFALRYH 1680

Query: 187  YF 192
            YF
Sbjct: 1681 YF 1682


>AY578812-1|AAT07317.1|  932|Anopheles gambiae wishful thinking
           protein.
          Length = 932

 Score = 23.0 bits (47), Expect = 8.8
 Identities = 9/27 (33%), Positives = 13/27 (48%)
 Frame = +2

Query: 299 NPRVYKRDETGASHAGDPGVYEGQIYR 379
           NPR       G SH   P + + Q+Y+
Sbjct: 551 NPRARTMPPKGCSHDDGPALEKAQLYQ 577


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 662,290
Number of Sequences: 2352
Number of extensions: 14524
Number of successful extensions: 79
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 79
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 79
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 67741110
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)