Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0384
         (689 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q9UVN3 Cluster: Rcb2.42; n=1; Coprinopsis cinerea|Rep: ...    36   0.93 
UniRef50_Q9UVN4 Cluster: Rcb1.42; n=3; Agaricomycetes|Rep: Rcb1....    35   2.2  
UniRef50_Q489D2 Cluster: Polysaccharide biosynthesis protein; n=...    34   2.9  
UniRef50_A6LUX1 Cluster: Uracil-xanthine permease; n=1; Clostrid...    33   6.6  

>UniRef50_Q9UVN3 Cluster: Rcb2.42; n=1; Coprinopsis cinerea|Rep:
           Rcb2.42 - Coprinus cinereus (Inky cap fungus)
           (Hormographiella aspergillata)
          Length = 389

 Score = 35.9 bits (79), Expect = 0.93
 Identities = 16/49 (32%), Positives = 26/49 (53%), Gaps = 9/49 (18%)
 Frame = -2

Query: 124 HKTDVAKGTPCQPTILKTTLPFFIVWFYPFIYVF---------IHHFFK 5
           H+ D+ +   C+P+I  +    FI+W  PFI +F         +HHFF+
Sbjct: 133 HRFDIVEDLGCRPSIYTSIPAIFIIWVPPFIAIFLTFCFGGVALHHFFR 181


>UniRef50_Q9UVN4 Cluster: Rcb1.42; n=3; Agaricomycetes|Rep: Rcb1.42
           - Coprinus cinereus (Inky cap fungus) (Hormographiella
           aspergillata)
          Length = 561

 Score = 34.7 bits (76), Expect = 2.2
 Identities = 14/35 (40%), Positives = 20/35 (57%)
 Frame = -2

Query: 124 HKTDVAKGTPCQPTILKTTLPFFIVWFYPFIYVFI 20
           H+ D+ +   CQPTI  +    FIVWF P ++  I
Sbjct: 134 HRYDIIQEFGCQPTIYISIPAIFIVWFPPLLFAVI 168


>UniRef50_Q489D2 Cluster: Polysaccharide biosynthesis protein; n=1;
           Colwellia psychrerythraea 34H|Rep: Polysaccharide
           biosynthesis protein - Colwellia psychrerythraea (strain
           34H / ATCC BAA-681) (Vibriopsychroerythus)
          Length = 406

 Score = 34.3 bits (75), Expect = 2.9
 Identities = 18/58 (31%), Positives = 32/58 (55%), Gaps = 5/58 (8%)
 Frame = +2

Query: 296 LSTEK*E*N*YCRYIFGILV*YSIVLFIGSMYIFLIL-----IINKIFVVSFLSLFFI 454
           L+  K + N YC+Y   +L   S++      Y+FL+L     I+NK+F++  + +F I
Sbjct: 275 LNRNKDKFNLYCKYYLLLLFTVSLLFIFVGQYVFLLLEINDEIVNKVFLILIIGIFNI 332


>UniRef50_A6LUX1 Cluster: Uracil-xanthine permease; n=1; Clostridium
           beijerinckii NCIMB 8052|Rep: Uracil-xanthine permease -
           Clostridium beijerinckii NCIMB 8052
          Length = 448

 Score = 33.1 bits (72), Expect = 6.6
 Identities = 18/59 (30%), Positives = 31/59 (52%)
 Frame = +2

Query: 371 LFIGSMYIFLILIINKIFVVSFLSLFFINTLFRSSL*PANKTCVKESVLKNSKWINDEH 547
           L +GS  + ++LI NK     F ++  +N +   ++  A    V  SV+ N+KWI+  H
Sbjct: 174 LILGSFVMIIVLISNKFLRGFFQAISVLNGIILGTIVAAFMGKVDFSVVTNAKWISIVH 232


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 568,422,660
Number of Sequences: 1657284
Number of extensions: 9901381
Number of successful extensions: 22944
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 21675
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22872
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 54132236449
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)