Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0384
         (689 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC024799-8|AAW88387.1|  297|Caenorhabditis elegans Hypothetical ...    29   3.1  
U70850-2|AAB09123.1|  229|Caenorhabditis elegans Hypothetical pr...    28   7.2  
AJ277649-1|CAB90211.1|  917|Caenorhabditis elegans CHE-14 protei...    28   7.2  
AF067618-5|AAC19198.2|  917|Caenorhabditis elegans Abnormal chem...    28   7.2  
Z82267-5|CAB05193.1|  203|Caenorhabditis elegans Hypothetical pr...    27   9.6  
Z82261-4|CAB05147.1|  203|Caenorhabditis elegans Hypothetical pr...    27   9.6  
Z78064-8|CAO82042.1|  357|Caenorhabditis elegans Hypothetical pr...    27   9.6  
AF039042-7|AAC48250.1|  336|Caenorhabditis elegans Seven tm rece...    27   9.6  

>AC024799-8|AAW88387.1|  297|Caenorhabditis elegans Hypothetical
           protein Y49C4A.2 protein.
          Length = 297

 Score = 29.1 bits (62), Expect = 3.1
 Identities = 13/51 (25%), Positives = 26/51 (50%)
 Frame = +2

Query: 326 YCRYIFGILV*YSIVLFIGSMYIFLILIINKIFVVSFLSLFFINTLFRSSL 478
           Y R++  IL+  S  ++IG  ++  +   + +F++  L L F N     S+
Sbjct: 45  YFRFVLDILLGISFFIYIGFSFLLELFPEDYLFLIVLLGLLFFNVAATRSI 95


>U70850-2|AAB09123.1|  229|Caenorhabditis elegans Hypothetical
           protein F28F9.2 protein.
          Length = 229

 Score = 27.9 bits (59), Expect = 7.2
 Identities = 12/31 (38%), Positives = 18/31 (58%), Gaps = 1/31 (3%)
 Frame = -2

Query: 94  CQPTILKTTLPFFIVWFYPF-IYVFIHHFFK 5
           C+   LK +LPF ++W   F I   +H FF+
Sbjct: 145 CRLVRLKQSLPFLVLWLIIFGIATLVHLFFE 175


>AJ277649-1|CAB90211.1|  917|Caenorhabditis elegans CHE-14 protein
          protein.
          Length = 917

 Score = 27.9 bits (59), Expect = 7.2
 Identities = 7/17 (41%), Positives = 13/17 (76%)
 Frame = -2

Query: 88 PTILKTTLPFFIVWFYP 38
          P ++ T +PF ++WF+P
Sbjct: 24 PVLITTVIPFGLIWFFP 40


>AF067618-5|AAC19198.2|  917|Caenorhabditis elegans Abnormal
          chemotaxis protein 14 protein.
          Length = 917

 Score = 27.9 bits (59), Expect = 7.2
 Identities = 7/17 (41%), Positives = 13/17 (76%)
 Frame = -2

Query: 88 PTILKTTLPFFIVWFYP 38
          P ++ T +PF ++WF+P
Sbjct: 24 PVLITTVIPFGLIWFFP 40


>Z82267-5|CAB05193.1|  203|Caenorhabditis elegans Hypothetical
           protein F38C2.7 protein.
          Length = 203

 Score = 27.5 bits (58), Expect = 9.6
 Identities = 19/49 (38%), Positives = 23/49 (46%)
 Frame = +3

Query: 438 CLFFSLIHFFDLVFSPQTKRALRNLF*KIQNGSTTNIHCKKT*AMHFFH 584
           C F   +H  +L F PQTKR  RN    + N  +T  HCK      F H
Sbjct: 109 CKFAHSVH--ELRF-PQTKRNHRNYKTVLCNNFSTTGHCKYGIRCQFIH 154


>Z82261-4|CAB05147.1|  203|Caenorhabditis elegans Hypothetical
           protein C35D6.4 protein.
          Length = 203

 Score = 27.5 bits (58), Expect = 9.6
 Identities = 19/49 (38%), Positives = 23/49 (46%)
 Frame = +3

Query: 438 CLFFSLIHFFDLVFSPQTKRALRNLF*KIQNGSTTNIHCKKT*AMHFFH 584
           C F   +H  +L F PQTKR  RN    + N  +T  HCK      F H
Sbjct: 109 CKFAHSVH--ELRF-PQTKRNHRNYKTVLCNNFSTTGHCKYGIRCQFIH 154


>Z78064-8|CAO82042.1|  357|Caenorhabditis elegans Hypothetical
           protein F57B1.9a protein.
          Length = 357

 Score = 27.5 bits (58), Expect = 9.6
 Identities = 15/37 (40%), Positives = 19/37 (51%)
 Frame = -1

Query: 584 MKKMHSLCFFTMNVRR*SILNFLEQIP*RTFCLRAKD 474
           MK    LC  T+++   SILN L  +P   F L  KD
Sbjct: 83  MKFFWFLCMLTLSIFIISILNLLINVPATLFSLLTKD 119


>AF039042-7|AAC48250.1|  336|Caenorhabditis elegans Seven tm
           receptor protein 160 protein.
          Length = 336

 Score = 27.5 bits (58), Expect = 9.6
 Identities = 15/47 (31%), Positives = 24/47 (51%), Gaps = 3/47 (6%)
 Frame = +3

Query: 354 YSIVSYCLLEVCIXXXXXXXT---KYLLSVFCLFFSLIHFFDLVFSP 485
           +S+++ C++ V I           KYLL  F +  S + F DL+ SP
Sbjct: 18  FSLLTNCVIIVLIFSSSPSKMGSYKYLLCYFSMLSSFVAFLDLLISP 64


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,013,999
Number of Sequences: 27780
Number of extensions: 267077
Number of successful extensions: 673
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 658
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 672
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1581836700
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)