Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0382
         (744 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A5FB10 Cluster: Fatty acid desaturase; n=1; Flavobacter...    34   4.2  
UniRef50_A3WIR9 Cluster: Membrane-associated protein; n=2; Alter...    33   5.6  
UniRef50_P24499 Cluster: ATP synthase a chain; n=4; Trypanosomat...    33   9.8  

>UniRef50_A5FB10 Cluster: Fatty acid desaturase; n=1; Flavobacterium
           johnsoniae UW101|Rep: Fatty acid desaturase -
           Flavobacterium johnsoniae UW101
          Length = 386

 Score = 33.9 bits (74), Expect = 4.2
 Identities = 21/48 (43%), Positives = 29/48 (60%)
 Frame = -3

Query: 640 YRNSPLFQLHIAVIHVTYIIFNIYVLYNT*LIYGRKKFDFYGDKSRYM 497
           + NSPLF+ H    H+ Y+ F IY LY+   IY R   DF+G K+ Y+
Sbjct: 167 FPNSPLFEYH-KYQHI-YMWF-IYPLYSLNWIYIRDFKDFFGTKNNYV 211


>UniRef50_A3WIR9 Cluster: Membrane-associated protein; n=2;
           Alteromonadales|Rep: Membrane-associated protein -
           Idiomarina baltica OS145
          Length = 742

 Score = 33.5 bits (73), Expect = 5.6
 Identities = 14/42 (33%), Positives = 27/42 (64%), Gaps = 2/42 (4%)
 Frame = +1

Query: 100 FIYPLLFS*Y--FVRLYLELLFCIINIYQIDYIGRNYLDNFD 219
           FIY LL++ Y  F+ +   LL   + +YQ+ ++G++Y  ++D
Sbjct: 298 FIYSLLYAGYINFILIVSALLLVSVKLYQMVFVGKSYYPDYD 339


>UniRef50_P24499 Cluster: ATP synthase a chain; n=4;
           Trypanosomatidae|Rep: ATP synthase a chain - Trypanosoma
           brucei brucei
          Length = 229

 Score = 32.7 bits (71), Expect = 9.8
 Identities = 12/28 (42%), Positives = 19/28 (67%)
 Frame = -1

Query: 99  YLFVTVCVFKLIWFNLSHTYNAFLCFAL 16
           YLFV +C+F L+WF L + Y+  L + +
Sbjct: 49  YLFVGLCLFLLLWFMLFNLYSLILYYCI 76


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 666,300,146
Number of Sequences: 1657284
Number of extensions: 12510656
Number of successful extensions: 25792
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 24617
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25772
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 60911752460
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)