Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0381
(739 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_03_0128 - 14677152-14677296,14677381-14677457,14679836-14680312 53 3e-07
07_03_1385 + 26189034-26189294,26189427-26189636,26191016-261910... 48 1e-05
02_05_0873 - 32372143-32372287,32372678-32372754,32372863-323730... 48 1e-05
03_05_1098 - 30395704-30395837,30396644-30396751,30396933-303971... 42 4e-04
06_01_0751 + 5630036-5630233,5630623-5630718,5631420-5631629,563... 36 0.025
09_04_0359 + 16941904-16942110,16943636-16943785,16944084-169442... 33 0.18
08_02_1381 - 26551920-26552053,26552963-26553070,26553154-265533... 31 0.72
02_05_0728 - 31267653-31267838,31268281-31268627,31268732-312688... 31 0.95
01_06_1801 - 39954425-39954533,39955289-39955578,39955786-399568... 29 2.9
12_02_0335 - 17669232-17670063,17670619-17672150 29 3.9
02_05_0717 + 31190626-31191234,31191954-31192394,31192699-311928... 29 3.9
01_07_0226 + 42130300-42131430,42131530-42131715,42133244-421333... 29 3.9
01_01_0452 - 3357687-3358332,3358779-3359641 29 3.9
09_04_0676 - 19383757-19383890,19384308-19384415,19384493-193846... 29 5.1
07_03_0369 - 17356806-17356934,17357145-17357278,17357989-173582... 28 6.7
>03_03_0128 - 14677152-14677296,14677381-14677457,14679836-14680312
Length = 232
Score = 52.8 bits (121), Expect = 3e-07
Identities = 26/56 (46%), Positives = 38/56 (67%), Gaps = 1/56 (1%)
Frame = +3
Query: 525 MEVELKRLEDLSEAIVQDFTLMRKREEEMRDTNESTNNRVLFFSIFSMA-CLFGSG 689
MEVELK+LED +I ++ +R REEEM++ N TN+R+ + FS+A CL +G
Sbjct: 161 MEVELKKLEDTINSIHEEMFYLRAREEEMQELNRRTNSRMAWLGFFSLAICLSVAG 216
>07_03_1385 +
26189034-26189294,26189427-26189636,26191016-26191092,
26191196-26191340
Length = 230
Score = 47.6 bits (108), Expect = 1e-05
Identities = 22/56 (39%), Positives = 39/56 (69%), Gaps = 1/56 (1%)
Frame = +3
Query: 525 MEVELKRLEDLSEAIVQDFTLMRKREEEMRDTNESTNNRVLFFSIFSMA-CLFGSG 689
ME+ELK+LE+ ++I ++ +R+REEEM++ N+ TN+R+ + S+ CL +G
Sbjct: 159 MEMELKKLEETIKSIHEEMFYLREREEEMQNLNKQTNSRMAWLGFLSLGICLSVAG 214
>02_05_0873 -
32372143-32372287,32372678-32372754,32372863-32373072,
32374645-32374869
Length = 218
Score = 47.6 bits (108), Expect = 1e-05
Identities = 22/53 (41%), Positives = 37/53 (69%)
Frame = +3
Query: 513 KLKPMEVELKRLEDLSEAIVQDFTLMRKREEEMRDTNESTNNRVLFFSIFSMA 671
K++ +E+EL++LE ++I Q+ ++ RE EMR +E TN RV +FSI S++
Sbjct: 143 KIEGVELELRKLEVAVQSIHQNMIYLKAREAEMRTVSEKTNARVAWFSILSLS 195
Score = 36.3 bits (80), Expect = 0.025
Identities = 20/62 (32%), Positives = 32/62 (51%)
Frame = +1
Query: 322 GHILSQKDTVTKGKFSFVTENYDMFEVCFISKVPSERRGIPHLVSLDIKIGIEAKTYEGI 501
G+ L + T G+F+F T + CF + S +G ++LD KIGI AK ++ I
Sbjct: 81 GNTLHHNENATVGQFAFTTSEAGNYLACF--WIDSAEKGSGISINLDWKIGIAAKDWDVI 138
Query: 502 GE 507
+
Sbjct: 139 AK 140
>03_05_1098 -
30395704-30395837,30396644-30396751,30396933-30397119,
30398127-30398330
Length = 210
Score = 42.3 bits (95), Expect = 4e-04
Identities = 19/60 (31%), Positives = 33/60 (55%)
Frame = +3
Query: 516 LKPMEVELKRLEDLSEAIVQDFTLMRKREEEMRDTNESTNNRVLFFSIFSMACLFGSGHL 695
L P+ V++ L++ E++ + ++ RE R TNEST RV+F++I G+ L
Sbjct: 133 LDPINVKIAELKEALESVTAEQKYLKAREARHRHTNESTRRRVMFYTIAEYLAFMGASAL 192
>06_01_0751 +
5630036-5630233,5630623-5630718,5631420-5631629,
5631735-5631811,5632204-5632222,5632304-5632348
Length = 214
Score = 36.3 bits (80), Expect = 0.025
Identities = 18/62 (29%), Positives = 32/62 (51%)
Frame = +1
Query: 322 GHILSQKDTVTKGKFSFVTENYDMFEVCFISKVPSERRGIPHLVSLDIKIGIEAKTYEGI 501
G+ + + T G+F+F T + CF P + G+ ++LD KIGI AK ++ +
Sbjct: 104 GNTVHHNENATTGQFAFTTSEAGNYLACFWLDSPEKGSGVS--LNLDWKIGIAAKDWDTV 161
Query: 502 GE 507
+
Sbjct: 162 AK 163
>09_04_0359 +
16941904-16942110,16943636-16943785,16944084-16944293,
16944376-16944452,16944554-16944698
Length = 262
Score = 33.5 bits (73), Expect = 0.18
Identities = 17/62 (27%), Positives = 33/62 (53%)
Frame = +1
Query: 322 GHILSQKDTVTKGKFSFVTENYDMFEVCFISKVPSERRGIPHLVSLDIKIGIEAKTYEGI 501
G I+ K V+ G+FSF T + CF + ++R + ++LD ++GI K ++ +
Sbjct: 125 GDIVHHKQKVSTGQFSFTTAEAGNYLACFSADGRNKRLVVK--LNLDWRVGIATKDWDSV 182
Query: 502 GE 507
+
Sbjct: 183 AK 184
>08_02_1381 -
26551920-26552053,26552963-26553070,26553154-26553340,
26554107-26554316
Length = 212
Score = 31.5 bits (68), Expect = 0.72
Identities = 13/43 (30%), Positives = 20/43 (46%)
Frame = +1
Query: 295 VDYIIKDSKGHILSQKDTVTKGKFSFVTENYDMFEVCFISKVP 423
VD ++KD G + T KF F+ + + CF +K P
Sbjct: 67 VDLVVKDPNGAQVRDSRDKTSDKFEFIVQKRGVHRFCFTNKSP 109
>02_05_0728 -
31267653-31267838,31268281-31268627,31268732-31268814,
31269019-31269101
Length = 232
Score = 31.1 bits (67), Expect = 0.95
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = -1
Query: 733 SLL*RTCEGTGLARWPDPKRHAIENILKN 647
+LL R C G+ RWP K ++E I+KN
Sbjct: 141 TLLKRRCRVLGIPRWPHRKVKSLETIIKN 169
>01_06_1801 - 39954425-39954533,39955289-39955578,39955786-39956838,
39956998-39957263,39957345-39957420,39957525-39957605,
39957676-39957831,39958565-39958669,39958761-39959367,
39959514-39959585,39959802-39959953,39960063-39960240,
39960642-39960745,39960822-39960953,39961036-39961132,
39961280-39961407,39961533-39961592,39962799-39962918,
39963011-39963091,39963173-39963361,39963826-39964024,
39964177-39964257,39964398-39964588,39965226-39965382,
39965986-39966119,39966266-39966334,39966434-39966481,
39966572-39966646,39967112-39967192,39967399-39967461,
39967564-39967623,39967754-39967795,39968777-39968902,
39969027-39969176
Length = 1843
Score = 29.5 bits (63), Expect = 2.9
Identities = 15/48 (31%), Positives = 27/48 (56%)
Frame = +3
Query: 495 RDRGGAKLKPMEVELKRLEDLSEAIVQDFTLMRKREEEMRDTNESTNN 638
+DR A++K + LK+LED S+ + +K +E ++D + NN
Sbjct: 970 KDRYDAEIKKLHENLKQLEDNSDNSSIAISRRKKDKERIQDLLDKLNN 1017
>12_02_0335 - 17669232-17670063,17670619-17672150
Length = 787
Score = 29.1 bits (62), Expect = 3.9
Identities = 17/55 (30%), Positives = 28/55 (50%), Gaps = 4/55 (7%)
Frame = -2
Query: 159 SNNTRYCTSMFIVVIYYLSCNK*SRIHN----IYDRKTNIISNFTSNRPMSWLTS 7
SN+T++C+S + + SC+ S I N D KTN+ + ++ WL S
Sbjct: 291 SNSTKFCSSKESISLASTSCSSTSSITNPTSCADDEKTNLGPEKSGDKSPEWLRS 345
>02_05_0717 +
31190626-31191234,31191954-31192394,31192699-31192802,
31193000-31194384,31194508-31194548,31195065-31195133,
31195335-31195435,31195747-31195825,31195939-31196037,
31196119-31196187,31197609-31197658,31197749-31197925,
31198045-31198152,31198224-31198290
Length = 1132
Score = 29.1 bits (62), Expect = 3.9
Identities = 13/36 (36%), Positives = 21/36 (58%)
Frame = +2
Query: 527 GSGTEETRRPIRSYRSRFHTNEEKRRRNERYQ*IHE 634
GSG EE R+ + + R R E +RRR++ + + E
Sbjct: 85 GSGAEERRQSVAAERRRSQEEEWERRRSQEEEAVRE 120
>01_07_0226 +
42130300-42131430,42131530-42131715,42133244-42133345,
42133425-42133481,42133563-42133658,42133736-42133828,
42133945-42134064,42134155-42134187,42134266-42134316,
42135129-42135191
Length = 643
Score = 29.1 bits (62), Expect = 3.9
Identities = 10/26 (38%), Positives = 16/26 (61%)
Frame = +1
Query: 352 TKGKFSFVTENYDMFEVCFISKVPSE 429
T+G+F + ENYD++ C VP +
Sbjct: 585 TRGRFRSMKENYDLYVACIDETVPEK 610
>01_01_0452 - 3357687-3358332,3358779-3359641
Length = 502
Score = 29.1 bits (62), Expect = 3.9
Identities = 15/42 (35%), Positives = 21/42 (50%)
Frame = -3
Query: 260 PALTRWRVINLSNTCVCSAPSST*SHQFHARLSSVTTRDIVP 135
P ++WR N + C+C PS++ S Q LS V T P
Sbjct: 17 PPFSQWRS-NAMSLCICPTPSASESSQPSVNLSVVKTPPTQP 57
>09_04_0676 -
19383757-19383890,19384308-19384415,19384493-19384679,
19384937-19385143
Length = 211
Score = 28.7 bits (61), Expect = 5.1
Identities = 11/43 (25%), Positives = 19/43 (44%)
Frame = +1
Query: 295 VDYIIKDSKGHILSQKDTVTKGKFSFVTENYDMFEVCFISKVP 423
VD +++D G+ + KF F+ + CF +K P
Sbjct: 66 VDLVVRDPNGNQIHDSRDKISDKFEFIVHRRGVHRFCFTNKSP 108
>07_03_0369 -
17356806-17356934,17357145-17357278,17357989-17358247,
17358322-17358410,17358644-17358794,17358889-17359032,
17359358-17359477,17359595-17359769,17359842-17360215
Length = 524
Score = 28.3 bits (60), Expect = 6.7
Identities = 17/65 (26%), Positives = 33/65 (50%)
Frame = +1
Query: 334 SQKDTVTKGKFSFVTENYDMFEVCFISKVPSERRGIPHLVSLDIKIGIEAKTYEGIGEVQ 513
S ++++ G FV+ + +++ + + + GIP L+ DIK+ I A Y+ I
Sbjct: 378 SVRESLGVGDIQFVSCSPTVYQAMLLDWMRNLEVGIPELLENDIKVLIYAGEYDLICNWL 437
Query: 514 N*SQW 528
S+W
Sbjct: 438 GNSRW 442
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,780,669
Number of Sequences: 37544
Number of extensions: 364512
Number of successful extensions: 923
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 903
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 923
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1945321620
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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