Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0381
(739 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X97442-1|CAA66071.1| 219|Homo sapiens transmembrane protein pro... 101 2e-21
U61734-1|AAB03625.1| 219|Homo sapiens protein trafficking prote... 101 2e-21
BC001825-1|AAH01825.1| 219|Homo sapiens transmembrane emp24-lik... 101 2e-21
BC001496-1|AAH01496.1| 219|Homo sapiens transmembrane emp24-lik... 101 2e-21
AL832012-1|CAD89913.1| 219|Homo sapiens hypothetical protein pr... 101 2e-21
AJ004913-1|CAA06213.1| 219|Homo sapiens integral membrane prote... 101 2e-21
AC007055-6|AAD31941.1| 219|Homo sapiens TMP21 protein. 101 2e-21
AK222972-1|BAD96692.1| 225|Homo sapiens Full-length cDNA 5-PRIM... 100 6e-21
X97444-1|CAA66073.1| 146|Homo sapiens transmembrane protein pro... 73 1e-12
X90872-1|CAA62380.1| 214|Homo sapiens gp25l2 protein. 43 0.001
BC001123-1|AAH01123.2| 235|Homo sapiens transmembrane emp24 pro... 43 0.001
AF441399-1|AAL35268.1| 214|Homo sapiens p25 protein. 43 0.001
BC057851-1|AAH57851.1| 227|Homo sapiens transmembrane emp24 pro... 41 0.004
BC052641-1|AAH52641.1| 227|Homo sapiens transmembrane emp24 pro... 41 0.004
AB097009-1|BAC77362.1| 107|Homo sapiens putative NFkB activatin... 41 0.004
L40397-1|AAC42003.1| 134|Homo sapiens protein ( Homo sapiens (c... 35 0.35
M58459-1|AAA63256.1| 263|Homo sapiens ribosomal protein S4Y iso... 30 7.5
M58458-1|AAA63255.1| 263|Homo sapiens ribosomal protein S4X iso... 30 7.5
M22146-1|AAA36597.1| 244|Homo sapiens protein ( Human scar prot... 30 7.5
CR456735-1|CAG33016.1| 263|Homo sapiens RPS4X protein. 30 7.5
BC100906-1|AAI00907.1| 262|Homo sapiens RPS4Y1 protein protein. 30 7.5
BC100905-1|AAI00906.1| 263|Homo sapiens ribosomal protein S4, Y... 30 7.5
BC100904-1|AAI00905.1| 263|Homo sapiens RPS4X protein protein. 30 7.5
BC100903-1|AAI00904.1| 263|Homo sapiens RPS4X protein protein. 30 7.5
BC071662-1|AAH71662.1| 263|Homo sapiens ribosomal protein S4, X... 30 7.5
BC010286-1|AAH10286.1| 263|Homo sapiens ribosomal protein S4, Y... 30 7.5
BC007308-1|AAH07308.2| 243|Homo sapiens RPS4X protein protein. 30 7.5
BC000472-1|AAH00472.1| 263|Homo sapiens ribosomal protein S4, X... 30 7.5
AK222594-1|BAD96314.1| 263|Homo sapiens ribosomal protein S4, Y... 30 7.5
AK222479-1|BAD96199.1| 263|Homo sapiens ribosomal protein S4, X... 30 7.5
AF041428-1|AAB96968.1| 263|Homo sapiens ribosomal protein s4 X ... 30 7.5
AF041427-1|AAB96967.1| 263|Homo sapiens ribosomal protein s4 Y ... 30 7.5
>X97442-1|CAA66071.1| 219|Homo sapiens transmembrane protein
protein.
Length = 219
Score = 101 bits (243), Expect = 2e-21
Identities = 70/175 (40%), Positives = 92/175 (52%), Gaps = 7/175 (4%)
Frame = +1
Query: 235 ITRQRVSAGEYDVTEIQGQ----RVDYIIKDSKGHILSQKDTVTKGKFSFVTENYDMFEV 402
I + + G Y++++ G R I DS GHIL K+ TKGKF+F TE+YDMFEV
Sbjct: 48 IHKDLLVTGAYEISDQSGGAGGLRSHLKITDSAGHILYSKEDATKGKFAFTTEDYDMFEV 107
Query: 403 CFISKVPSERRGIPHLVSLDIKIGIEAKTYEGIGEVQN*SQWKWN*RD*KTYQKL---SF 573
CF SK R LV LD+K G+EAK YE I +V+ + R + + F
Sbjct: 108 CFESK--GTGRIPDQLVILDMKHGVEAKNYEEIAKVEKLKPLEVELRRLEDLSESIVNDF 165
Query: 574 KISHXXXXXXXX*EIPMNPRIIEFYSSVYSRWRASLGLATWQVLYLRRFFKAKKL 738
N R++ Y S++S + +GLATWQV YLRRFFKAKKL
Sbjct: 166 AYMKKREEEMRDTNESTNTRVL--YFSIFSMF-CLIGLATWQVFYLRRFFKAKKL 217
Score = 99.5 bits (237), Expect = 1e-20
Identities = 46/57 (80%), Positives = 51/57 (89%)
Frame = +3
Query: 513 KLKPMEVELKRLEDLSEAIVQDFTLMRKREEEMRDTNESTNNRVLFFSIFSMACLFG 683
KLKP+EVEL+RLEDLSE+IV DF M+KREEEMRDTNESTN RVL+FSIFSM CL G
Sbjct: 143 KLKPLEVELRRLEDLSESIVNDFAYMKKREEEMRDTNESTNTRVLYFSIFSMFCLIG 199
>U61734-1|AAB03625.1| 219|Homo sapiens protein trafficking protein
protein.
Length = 219
Score = 101 bits (243), Expect = 2e-21
Identities = 70/175 (40%), Positives = 92/175 (52%), Gaps = 7/175 (4%)
Frame = +1
Query: 235 ITRQRVSAGEYDVTEIQGQ----RVDYIIKDSKGHILSQKDTVTKGKFSFVTENYDMFEV 402
I + + G Y++++ G R I DS GHIL K+ TKGKF+F TE+YDMFEV
Sbjct: 48 IHKDLLVTGAYEISDQSGGAGGLRSHLKITDSAGHILYSKEDATKGKFAFTTEDYDMFEV 107
Query: 403 CFISKVPSERRGIPHLVSLDIKIGIEAKTYEGIGEVQN*SQWKWN*RD*KTYQKL---SF 573
CF SK R LV LD+K G+EAK YE I +V+ + R + + F
Sbjct: 108 CFESK--GTGRIPDQLVILDMKHGVEAKNYEEIAKVEKLKPLEVELRRLEDLSESIVNDF 165
Query: 574 KISHXXXXXXXX*EIPMNPRIIEFYSSVYSRWRASLGLATWQVLYLRRFFKAKKL 738
N R++ Y S++S + +GLATWQV YLRRFFKAKKL
Sbjct: 166 AYMKKREEEMRDTNESTNTRVL--YFSIFSMF-CLIGLATWQVFYLRRFFKAKKL 217
Score = 99.5 bits (237), Expect = 1e-20
Identities = 46/57 (80%), Positives = 51/57 (89%)
Frame = +3
Query: 513 KLKPMEVELKRLEDLSEAIVQDFTLMRKREEEMRDTNESTNNRVLFFSIFSMACLFG 683
KLKP+EVEL+RLEDLSE+IV DF M+KREEEMRDTNESTN RVL+FSIFSM CL G
Sbjct: 143 KLKPLEVELRRLEDLSESIVNDFAYMKKREEEMRDTNESTNTRVLYFSIFSMFCLIG 199
>BC001825-1|AAH01825.1| 219|Homo sapiens transmembrane emp24-like
trafficking protein 10 (yeast) protein.
Length = 219
Score = 101 bits (243), Expect = 2e-21
Identities = 70/175 (40%), Positives = 92/175 (52%), Gaps = 7/175 (4%)
Frame = +1
Query: 235 ITRQRVSAGEYDVTEIQGQ----RVDYIIKDSKGHILSQKDTVTKGKFSFVTENYDMFEV 402
I + + G Y++++ G R I DS GHIL K+ TKGKF+F TE+YDMFEV
Sbjct: 48 IHKDLLVTGAYEISDQSGGAGGLRSHLKITDSAGHILYSKEDATKGKFAFTTEDYDMFEV 107
Query: 403 CFISKVPSERRGIPHLVSLDIKIGIEAKTYEGIGEVQN*SQWKWN*RD*KTYQKL---SF 573
CF SK R LV LD+K G+EAK YE I +V+ + R + + F
Sbjct: 108 CFESK--GTGRIPDQLVILDMKHGVEAKNYEEIAKVEKLKPLEVELRRLEDLSESIVNDF 165
Query: 574 KISHXXXXXXXX*EIPMNPRIIEFYSSVYSRWRASLGLATWQVLYLRRFFKAKKL 738
N R++ Y S++S + +GLATWQV YLRRFFKAKKL
Sbjct: 166 AYMKKREEEMRDTNESTNTRVL--YFSIFSMF-CLIGLATWQVFYLRRFFKAKKL 217
Score = 99.5 bits (237), Expect = 1e-20
Identities = 46/57 (80%), Positives = 51/57 (89%)
Frame = +3
Query: 513 KLKPMEVELKRLEDLSEAIVQDFTLMRKREEEMRDTNESTNNRVLFFSIFSMACLFG 683
KLKP+EVEL+RLEDLSE+IV DF M+KREEEMRDTNESTN RVL+FSIFSM CL G
Sbjct: 143 KLKPLEVELRRLEDLSESIVNDFAYMKKREEEMRDTNESTNTRVLYFSIFSMFCLIG 199
>BC001496-1|AAH01496.1| 219|Homo sapiens transmembrane emp24-like
trafficking protein 10 (yeast) protein.
Length = 219
Score = 101 bits (243), Expect = 2e-21
Identities = 70/175 (40%), Positives = 92/175 (52%), Gaps = 7/175 (4%)
Frame = +1
Query: 235 ITRQRVSAGEYDVTEIQGQ----RVDYIIKDSKGHILSQKDTVTKGKFSFVTENYDMFEV 402
I + + G Y++++ G R I DS GHIL K+ TKGKF+F TE+YDMFEV
Sbjct: 48 IHKDLLVTGAYEISDQSGGAGGLRSHLKITDSAGHILYSKEDATKGKFAFTTEDYDMFEV 107
Query: 403 CFISKVPSERRGIPHLVSLDIKIGIEAKTYEGIGEVQN*SQWKWN*RD*KTYQKL---SF 573
CF SK R LV LD+K G+EAK YE I +V+ + R + + F
Sbjct: 108 CFESK--GTGRIPDQLVILDMKHGVEAKNYEEIAKVEKLKPLEVELRRLEDLSESIVNDF 165
Query: 574 KISHXXXXXXXX*EIPMNPRIIEFYSSVYSRWRASLGLATWQVLYLRRFFKAKKL 738
N R++ Y S++S + +GLATWQV YLRRFFKAKKL
Sbjct: 166 AYMKKREEEMRDTNESTNTRVL--YFSIFSMF-CLIGLATWQVFYLRRFFKAKKL 217
Score = 99.5 bits (237), Expect = 1e-20
Identities = 46/57 (80%), Positives = 51/57 (89%)
Frame = +3
Query: 513 KLKPMEVELKRLEDLSEAIVQDFTLMRKREEEMRDTNESTNNRVLFFSIFSMACLFG 683
KLKP+EVEL+RLEDLSE+IV DF M+KREEEMRDTNESTN RVL+FSIFSM CL G
Sbjct: 143 KLKPLEVELRRLEDLSESIVNDFAYMKKREEEMRDTNESTNTRVLYFSIFSMFCLIG 199
>AL832012-1|CAD89913.1| 219|Homo sapiens hypothetical protein
protein.
Length = 219
Score = 101 bits (243), Expect = 2e-21
Identities = 70/175 (40%), Positives = 92/175 (52%), Gaps = 7/175 (4%)
Frame = +1
Query: 235 ITRQRVSAGEYDVTEIQGQ----RVDYIIKDSKGHILSQKDTVTKGKFSFVTENYDMFEV 402
I + + G Y++++ G R I DS GHIL K+ TKGKF+F TE+YDMFEV
Sbjct: 48 IHKDLLVTGAYEISDQSGGAGGLRSHLRITDSAGHILYSKEDATKGKFAFTTEDYDMFEV 107
Query: 403 CFISKVPSERRGIPHLVSLDIKIGIEAKTYEGIGEVQN*SQWKWN*RD*KTYQKL---SF 573
CF SK R LV LD+K G+EAK YE I +V+ + R + + F
Sbjct: 108 CFESK--GTGRIPDQLVILDMKHGVEAKNYEEIAKVEKLKPLEVELRRLEDLSESIVNDF 165
Query: 574 KISHXXXXXXXX*EIPMNPRIIEFYSSVYSRWRASLGLATWQVLYLRRFFKAKKL 738
N R++ Y S++S + +GLATWQV YLRRFFKAKKL
Sbjct: 166 AYMKKREEEMRDTNESTNTRVL--YFSIFSMF-CLIGLATWQVFYLRRFFKAKKL 217
Score = 99.5 bits (237), Expect = 1e-20
Identities = 46/57 (80%), Positives = 51/57 (89%)
Frame = +3
Query: 513 KLKPMEVELKRLEDLSEAIVQDFTLMRKREEEMRDTNESTNNRVLFFSIFSMACLFG 683
KLKP+EVEL+RLEDLSE+IV DF M+KREEEMRDTNESTN RVL+FSIFSM CL G
Sbjct: 143 KLKPLEVELRRLEDLSESIVNDFAYMKKREEEMRDTNESTNTRVLYFSIFSMFCLIG 199
>AJ004913-1|CAA06213.1| 219|Homo sapiens integral membrane protein,
Tmp21-I (p23) protein.
Length = 219
Score = 101 bits (243), Expect = 2e-21
Identities = 70/175 (40%), Positives = 92/175 (52%), Gaps = 7/175 (4%)
Frame = +1
Query: 235 ITRQRVSAGEYDVTEIQGQ----RVDYIIKDSKGHILSQKDTVTKGKFSFVTENYDMFEV 402
I + + G Y++++ G R I DS GHIL K+ TKGKF+F TE+YDMFEV
Sbjct: 48 IHKDLLVTGAYEISDQSGGAGGLRSHLKITDSAGHILYSKEDATKGKFAFTTEDYDMFEV 107
Query: 403 CFISKVPSERRGIPHLVSLDIKIGIEAKTYEGIGEVQN*SQWKWN*RD*KTYQKL---SF 573
CF SK R LV LD+K G+EAK YE I +V+ + R + + F
Sbjct: 108 CFESK--GTGRIPDQLVILDMKHGVEAKNYEEIAKVEKLKPLEVELRRLEDLSESIVNDF 165
Query: 574 KISHXXXXXXXX*EIPMNPRIIEFYSSVYSRWRASLGLATWQVLYLRRFFKAKKL 738
N R++ Y S++S + +GLATWQV YLRRFFKAKKL
Sbjct: 166 AYMKKREEEMRDTNESTNTRVL--YFSIFSMF-CLIGLATWQVFYLRRFFKAKKL 217
Score = 99.5 bits (237), Expect = 1e-20
Identities = 46/57 (80%), Positives = 51/57 (89%)
Frame = +3
Query: 513 KLKPMEVELKRLEDLSEAIVQDFTLMRKREEEMRDTNESTNNRVLFFSIFSMACLFG 683
KLKP+EVEL+RLEDLSE+IV DF M+KREEEMRDTNESTN RVL+FSIFSM CL G
Sbjct: 143 KLKPLEVELRRLEDLSESIVNDFAYMKKREEEMRDTNESTNTRVLYFSIFSMFCLIG 199
>AC007055-6|AAD31941.1| 219|Homo sapiens TMP21 protein.
Length = 219
Score = 101 bits (243), Expect = 2e-21
Identities = 70/175 (40%), Positives = 92/175 (52%), Gaps = 7/175 (4%)
Frame = +1
Query: 235 ITRQRVSAGEYDVTEIQGQ----RVDYIIKDSKGHILSQKDTVTKGKFSFVTENYDMFEV 402
I + + G Y++++ G R I DS GHIL K+ TKGKF+F TE+YDMFEV
Sbjct: 48 IHKDLLVTGAYEISDQSGGAGGLRSHLKITDSAGHILYSKEDATKGKFAFTTEDYDMFEV 107
Query: 403 CFISKVPSERRGIPHLVSLDIKIGIEAKTYEGIGEVQN*SQWKWN*RD*KTYQKL---SF 573
CF SK R LV LD+K G+EAK YE I +V+ + R + + F
Sbjct: 108 CFESK--GTGRIPDQLVILDMKHGVEAKNYEEIAKVEKLKPLEVELRRLEDLSESIVNDF 165
Query: 574 KISHXXXXXXXX*EIPMNPRIIEFYSSVYSRWRASLGLATWQVLYLRRFFKAKKL 738
N R++ Y S++S + +GLATWQV YLRRFFKAKKL
Sbjct: 166 AYMKKREEEMRDTNESTNTRVL--YFSIFSMF-CLIGLATWQVFYLRRFFKAKKL 217
Score = 99.5 bits (237), Expect = 1e-20
Identities = 46/57 (80%), Positives = 51/57 (89%)
Frame = +3
Query: 513 KLKPMEVELKRLEDLSEAIVQDFTLMRKREEEMRDTNESTNNRVLFFSIFSMACLFG 683
KLKP+EVEL+RLEDLSE+IV DF M+KREEEMRDTNESTN RVL+FSIFSM CL G
Sbjct: 143 KLKPLEVELRRLEDLSESIVNDFAYMKKREEEMRDTNESTNTRVLYFSIFSMFCLIG 199
>AK222972-1|BAD96692.1| 225|Homo sapiens Full-length cDNA 5-PRIME
end of clone CS0DF013YM24 of Fetal brain of Homo sapie
protein.
Length = 225
Score = 100 bits (239), Expect = 6e-21
Identities = 69/175 (39%), Positives = 92/175 (52%), Gaps = 7/175 (4%)
Frame = +1
Query: 235 ITRQRVSAGEYDVTEIQGQ----RVDYIIKDSKGHILSQKDTVTKGKFSFVTENYDMFEV 402
I + + G Y++++ G R I DS GHIL K+ TKGKF+F TE+YDMFEV
Sbjct: 54 IHKDLLVTGAYEISDQSGGAGGLRSHLKITDSAGHILYSKEDATKGKFAFTTEDYDMFEV 113
Query: 403 CFISKVPSERRGIPHLVSLDIKIGIEAKTYEGIGEVQN*SQWKWN*RD*KTYQKL---SF 573
CF SK R LV LD+K G+EAK YE I +V+ + R + + F
Sbjct: 114 CFESK--GTGRIPDQLVILDMKHGVEAKNYEEIAKVEKLKPLEVELRRLEDLSESIVNDF 171
Query: 574 KISHXXXXXXXX*EIPMNPRIIEFYSSVYSRWRASLGLATWQVLYLRRFFKAKKL 738
N R++ Y S++S + +GLATWQV YLRRFF+AKKL
Sbjct: 172 AYMKKREEEMRDTNESTNTRVL--YFSIFSMF-CLIGLATWQVFYLRRFFEAKKL 223
Score = 99.5 bits (237), Expect = 1e-20
Identities = 46/57 (80%), Positives = 51/57 (89%)
Frame = +3
Query: 513 KLKPMEVELKRLEDLSEAIVQDFTLMRKREEEMRDTNESTNNRVLFFSIFSMACLFG 683
KLKP+EVEL+RLEDLSE+IV DF M+KREEEMRDTNESTN RVL+FSIFSM CL G
Sbjct: 149 KLKPLEVELRRLEDLSESIVNDFAYMKKREEEMRDTNESTNTRVLYFSIFSMFCLIG 205
>X97444-1|CAA66073.1| 146|Homo sapiens transmembrane protein
protein.
Length = 146
Score = 72.9 bits (171), Expect = 1e-12
Identities = 44/102 (43%), Positives = 56/102 (54%), Gaps = 5/102 (4%)
Frame = +1
Query: 223 FERLITRQRVSAGEYDVTEIQGQRVDYI----IKDSKGHILSQKDTVTKGKFSFVTENYD 390
F I + + G Y++++ G I DS GHI K TKGKF+F TE+YD
Sbjct: 29 FHEEIHKDLLVTGTYEISDQSGGTGGLCSHLKITDSAGHIFYSKKNTTKGKFAFTTEDYD 88
Query: 391 MFEVCFISKVPSERRGIP-HLVSLDIKIGIEAKTYEGIGEVQ 513
MFEVCF SK E IP LV LD+K G+E K Y I +V+
Sbjct: 89 MFEVCFESK---ETGQIPDQLVILDMKHGVEVKNYREIAKVE 127
Score = 33.1 bits (72), Expect = 1.1
Identities = 14/19 (73%), Positives = 18/19 (94%)
Frame = +3
Query: 513 KLKPMEVELKRLEDLSEAI 569
KLKP+EV+L+ LEDLSE+I
Sbjct: 128 KLKPLEVKLRHLEDLSESI 146
>X90872-1|CAA62380.1| 214|Homo sapiens gp25l2 protein.
Length = 214
Score = 43.2 bits (97), Expect = 0.001
Identities = 22/59 (37%), Positives = 34/59 (57%)
Frame = +3
Query: 513 KLKPMEVELKRLEDLSEAIVQDFTLMRKREEEMRDTNESTNNRVLFFSIFSMACLFGSG 689
KL +++ +++L + E I ++ R REE R T+ESTN RVL++SI L G
Sbjct: 139 KLSELQLRVRQLVEQVEQIQKEQNYQRWREERFRQTSESTNQRVLWWSILQTLILVAIG 197
>BC001123-1|AAH01123.2| 235|Homo sapiens transmembrane emp24
protein transport domain containing 9 protein.
Length = 235
Score = 43.2 bits (97), Expect = 0.001
Identities = 22/59 (37%), Positives = 34/59 (57%)
Frame = +3
Query: 513 KLKPMEVELKRLEDLSEAIVQDFTLMRKREEEMRDTNESTNNRVLFFSIFSMACLFGSG 689
KL +++ +++L + E I ++ R REE R T+ESTN RVL++SI L G
Sbjct: 160 KLSELQLRVRQLVEQVEQIQKEQNYQRWREERFRQTSESTNQRVLWWSILQTLILVAIG 218
>AF441399-1|AAL35268.1| 214|Homo sapiens p25 protein.
Length = 214
Score = 43.2 bits (97), Expect = 0.001
Identities = 22/59 (37%), Positives = 34/59 (57%)
Frame = +3
Query: 513 KLKPMEVELKRLEDLSEAIVQDFTLMRKREEEMRDTNESTNNRVLFFSIFSMACLFGSG 689
KL +++ +++L + E I ++ R REE R T+ESTN RVL++SI L G
Sbjct: 139 KLSELQLRVRQLVEQVEQIQKEQNYQRWREERFRQTSESTNQRVLWWSILQTLILVAIG 197
>BC057851-1|AAH57851.1| 227|Homo sapiens transmembrane emp24
protein transport domain containing 4 protein.
Length = 227
Score = 41.1 bits (92), Expect = 0.004
Identities = 23/59 (38%), Positives = 34/59 (57%)
Frame = +3
Query: 513 KLKPMEVELKRLEDLSEAIVQDFTLMRKREEEMRDTNESTNNRVLFFSIFSMACLFGSG 689
KL +++ ++L D E I ++ R REE R T+ESTN RVL++SI L +G
Sbjct: 152 KLTELQLRARQLLDQVEQIQKEQDYQRYREERFRLTSESTNQRVLWWSIAQTVILILTG 210
>BC052641-1|AAH52641.1| 227|Homo sapiens transmembrane emp24
protein transport domain containing 4 protein.
Length = 227
Score = 41.1 bits (92), Expect = 0.004
Identities = 23/59 (38%), Positives = 34/59 (57%)
Frame = +3
Query: 513 KLKPMEVELKRLEDLSEAIVQDFTLMRKREEEMRDTNESTNNRVLFFSIFSMACLFGSG 689
KL +++ ++L D E I ++ R REE R T+ESTN RVL++SI L +G
Sbjct: 152 KLTELQLRARQLLDQVEQIQKEQDYQRYREERFRLTSESTNQRVLWWSIAQTVILILTG 210
>AB097009-1|BAC77362.1| 107|Homo sapiens putative NFkB activating
protein protein.
Length = 107
Score = 41.1 bits (92), Expect = 0.004
Identities = 23/59 (38%), Positives = 34/59 (57%)
Frame = +3
Query: 513 KLKPMEVELKRLEDLSEAIVQDFTLMRKREEEMRDTNESTNNRVLFFSIFSMACLFGSG 689
KL +++ ++L D E I ++ R REE R T+ESTN RVL++SI L +G
Sbjct: 32 KLTELQLRARQLLDQVEQIQKEQDYQRYREERFRLTSESTNQRVLWWSIAQTVILILTG 90
>L40397-1|AAC42003.1| 134|Homo sapiens protein ( Homo sapiens
(clone S31i125) mRNA, 3' end of cds. ).
Length = 134
Score = 34.7 bits (76), Expect = 0.35
Identities = 21/58 (36%), Positives = 30/58 (51%), Gaps = 5/58 (8%)
Frame = +1
Query: 235 ITRQRVSAGEYDVTEIQGQ----RVDYIIKDSKGHILSQKDTVTK-GKFSFVTENYDM 393
I + + G Y++++ G R I DS GHIL K+ T+ G F TE+YDM
Sbjct: 57 IHKDLLVTGAYEISDQSGGAGGLRSHLKITDSAGHILYSKEDATQGGNLPFTTEDYDM 114
>M58459-1|AAA63256.1| 263|Homo sapiens ribosomal protein S4Y
isoform protein.
Length = 263
Score = 30.3 bits (65), Expect = 7.5
Identities = 14/41 (34%), Positives = 25/41 (60%), Gaps = 2/41 (4%)
Frame = +1
Query: 352 TKGKFSF--VTENYDMFEVCFISKVPSERRGIPHLVSLDIK 468
TKG+F+ +T +++C + K+ +GIPHLV+ D +
Sbjct: 105 TKGRFAVHRITVEEAKYKLCKVRKITVGVKGIPHLVTHDAR 145
>M58458-1|AAA63255.1| 263|Homo sapiens ribosomal protein S4X
isoform protein.
Length = 263
Score = 30.3 bits (65), Expect = 7.5
Identities = 14/41 (34%), Positives = 25/41 (60%), Gaps = 2/41 (4%)
Frame = +1
Query: 352 TKGKFSF--VTENYDMFEVCFISKVPSERRGIPHLVSLDIK 468
TKG+F+ +T +++C + K+ +GIPHLV+ D +
Sbjct: 105 TKGRFAVHRITPEEAKYKLCKVRKIFVGTKGIPHLVTHDAR 145
>M22146-1|AAA36597.1| 244|Homo sapiens protein ( Human scar protein
mRNA, complete cds. ).
Length = 244
Score = 30.3 bits (65), Expect = 7.5
Identities = 14/41 (34%), Positives = 25/41 (60%), Gaps = 2/41 (4%)
Frame = +1
Query: 352 TKGKFSF--VTENYDMFEVCFISKVPSERRGIPHLVSLDIK 468
TKG+F+ +T +++C + K+ +GIPHLV+ D +
Sbjct: 86 TKGRFAVHRITPEEAKYKLCKVRKIFVGTKGIPHLVTHDAR 126
>CR456735-1|CAG33016.1| 263|Homo sapiens RPS4X protein.
Length = 263
Score = 30.3 bits (65), Expect = 7.5
Identities = 14/41 (34%), Positives = 25/41 (60%), Gaps = 2/41 (4%)
Frame = +1
Query: 352 TKGKFSF--VTENYDMFEVCFISKVPSERRGIPHLVSLDIK 468
TKG+F+ +T +++C + K+ +GIPHLV+ D +
Sbjct: 105 TKGRFAVHRITPEEAKYKLCKVRKIFVGTKGIPHLVTHDAR 145
>BC100906-1|AAI00907.1| 262|Homo sapiens RPS4Y1 protein protein.
Length = 262
Score = 30.3 bits (65), Expect = 7.5
Identities = 14/41 (34%), Positives = 25/41 (60%), Gaps = 2/41 (4%)
Frame = +1
Query: 352 TKGKFSF--VTENYDMFEVCFISKVPSERRGIPHLVSLDIK 468
TKG+F+ +T +++C + K+ +GIPHLV+ D +
Sbjct: 104 TKGRFAVHRITVEEAKYKLCKVRKITVGVKGIPHLVTHDAR 144
>BC100905-1|AAI00906.1| 263|Homo sapiens ribosomal protein S4,
Y-linked 1 protein.
Length = 263
Score = 30.3 bits (65), Expect = 7.5
Identities = 14/41 (34%), Positives = 25/41 (60%), Gaps = 2/41 (4%)
Frame = +1
Query: 352 TKGKFSF--VTENYDMFEVCFISKVPSERRGIPHLVSLDIK 468
TKG+F+ +T +++C + K+ +GIPHLV+ D +
Sbjct: 105 TKGRFAVHRITVEEAKYKLCKVRKITVGVKGIPHLVTHDAR 145
>BC100904-1|AAI00905.1| 263|Homo sapiens RPS4X protein protein.
Length = 263
Score = 30.3 bits (65), Expect = 7.5
Identities = 14/41 (34%), Positives = 25/41 (60%), Gaps = 2/41 (4%)
Frame = +1
Query: 352 TKGKFSF--VTENYDMFEVCFISKVPSERRGIPHLVSLDIK 468
TKG+F+ +T +++C + K+ +GIPHLV+ D +
Sbjct: 105 TKGRFAVHRITPEEAKYKLCKVRKIFVGTKGIPHLVTHDAR 145
>BC100903-1|AAI00904.1| 263|Homo sapiens RPS4X protein protein.
Length = 263
Score = 30.3 bits (65), Expect = 7.5
Identities = 14/41 (34%), Positives = 25/41 (60%), Gaps = 2/41 (4%)
Frame = +1
Query: 352 TKGKFSF--VTENYDMFEVCFISKVPSERRGIPHLVSLDIK 468
TKG+F+ +T +++C + K+ +GIPHLV+ D +
Sbjct: 105 TKGRFAVHRITPEEAKYKLCKVRKIFVGTKGIPHLVTHDAR 145
>BC071662-1|AAH71662.1| 263|Homo sapiens ribosomal protein S4,
X-linked protein.
Length = 263
Score = 30.3 bits (65), Expect = 7.5
Identities = 14/41 (34%), Positives = 25/41 (60%), Gaps = 2/41 (4%)
Frame = +1
Query: 352 TKGKFSF--VTENYDMFEVCFISKVPSERRGIPHLVSLDIK 468
TKG+F+ +T +++C + K+ +GIPHLV+ D +
Sbjct: 105 TKGRFAVHRITPEEAKYKLCKVRKIFVGTKGIPHLVTHDAR 145
>BC010286-1|AAH10286.1| 263|Homo sapiens ribosomal protein S4,
Y-linked 1 protein.
Length = 263
Score = 30.3 bits (65), Expect = 7.5
Identities = 14/41 (34%), Positives = 25/41 (60%), Gaps = 2/41 (4%)
Frame = +1
Query: 352 TKGKFSF--VTENYDMFEVCFISKVPSERRGIPHLVSLDIK 468
TKG+F+ +T +++C + K+ +GIPHLV+ D +
Sbjct: 105 TKGRFAVHRITVEEAKYKLCKVRKITVGVKGIPHLVTHDAR 145
>BC007308-1|AAH07308.2| 243|Homo sapiens RPS4X protein protein.
Length = 243
Score = 30.3 bits (65), Expect = 7.5
Identities = 14/41 (34%), Positives = 25/41 (60%), Gaps = 2/41 (4%)
Frame = +1
Query: 352 TKGKFSF--VTENYDMFEVCFISKVPSERRGIPHLVSLDIK 468
TKG+F+ +T +++C + K+ +GIPHLV+ D +
Sbjct: 85 TKGRFAVHRITPEEAKYKLCKVRKIFVGTKGIPHLVTHDAR 125
>BC000472-1|AAH00472.1| 263|Homo sapiens ribosomal protein S4,
X-linked protein.
Length = 263
Score = 30.3 bits (65), Expect = 7.5
Identities = 14/41 (34%), Positives = 25/41 (60%), Gaps = 2/41 (4%)
Frame = +1
Query: 352 TKGKFSF--VTENYDMFEVCFISKVPSERRGIPHLVSLDIK 468
TKG+F+ +T +++C + K+ +GIPHLV+ D +
Sbjct: 105 TKGRFAVHRITPEEAKYKLCKVRKIFVGTKGIPHLVTHDAR 145
>AK222594-1|BAD96314.1| 263|Homo sapiens ribosomal protein S4,
Y-linked 1 Y isoform variant protein.
Length = 263
Score = 30.3 bits (65), Expect = 7.5
Identities = 14/41 (34%), Positives = 25/41 (60%), Gaps = 2/41 (4%)
Frame = +1
Query: 352 TKGKFSF--VTENYDMFEVCFISKVPSERRGIPHLVSLDIK 468
TKG+F+ +T +++C + K+ +GIPHLV+ D +
Sbjct: 105 TKGRFAVHRITVEEAKYKLCKVRKITVGVKGIPHLVTHDAR 145
>AK222479-1|BAD96199.1| 263|Homo sapiens ribosomal protein S4,
X-linked X isoform variant protein.
Length = 263
Score = 30.3 bits (65), Expect = 7.5
Identities = 14/41 (34%), Positives = 25/41 (60%), Gaps = 2/41 (4%)
Frame = +1
Query: 352 TKGKFSF--VTENYDMFEVCFISKVPSERRGIPHLVSLDIK 468
TKG+F+ +T +++C + K+ +GIPHLV+ D +
Sbjct: 105 TKGRFAVHRITPEEAKYKLCKVRKIFVGTKGIPHLVTHDAR 145
>AF041428-1|AAB96968.1| 263|Homo sapiens ribosomal protein s4 X
isoform protein.
Length = 263
Score = 30.3 bits (65), Expect = 7.5
Identities = 14/41 (34%), Positives = 25/41 (60%), Gaps = 2/41 (4%)
Frame = +1
Query: 352 TKGKFSF--VTENYDMFEVCFISKVPSERRGIPHLVSLDIK 468
TKG+F+ +T +++C + K+ +GIPHLV+ D +
Sbjct: 105 TKGRFAVHRITPEEAKYKLCKVRKIFVGTKGIPHLVTHDAR 145
>AF041427-1|AAB96967.1| 263|Homo sapiens ribosomal protein s4 Y
isoform protein.
Length = 263
Score = 30.3 bits (65), Expect = 7.5
Identities = 14/41 (34%), Positives = 25/41 (60%), Gaps = 2/41 (4%)
Frame = +1
Query: 352 TKGKFSF--VTENYDMFEVCFISKVPSERRGIPHLVSLDIK 468
TKG+F+ +T +++C + K+ +GIPHLV+ D +
Sbjct: 105 TKGRFAVHRITVEEAKYKLCKVRKITVGVKGIPHLVTHDAR 145
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 102,836,984
Number of Sequences: 237096
Number of extensions: 1979353
Number of successful extensions: 4345
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 4140
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4335
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8791154398
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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