Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0381
(739 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z74035-1|CAA98480.1| 204|Caenorhabditis elegans Hypothetical pr... 91 6e-19
AL117207-7|CAB60397.1| 211|Caenorhabditis elegans Hypothetical ... 44 1e-04
AC199170-2|ABO33261.1| 167|Caenorhabditis elegans Hypothetical ... 33 0.28
Z75550-15|CAA99931.2| 2003|Caenorhabditis elegans Hypothetical p... 30 2.0
Z75538-4|CAA99841.2| 2003|Caenorhabditis elegans Hypothetical pr... 30 2.0
U49263-1|AAC47238.1| 2003|Caenorhabditis elegans non-muscle myos... 30 2.0
AF014940-5|AAB63937.1| 203|Caenorhabditis elegans Suppressor/en... 30 2.0
Z68227-9|CAA92514.1| 64|Caenorhabditis elegans Hypothetical pr... 28 6.0
Z68116-10|CAI79231.1| 182|Caenorhabditis elegans Hypothetical p... 28 6.0
>Z74035-1|CAA98480.1| 204|Caenorhabditis elegans Hypothetical
protein F47G9.1 protein.
Length = 204
Score = 91.5 bits (217), Expect = 6e-19
Identities = 40/57 (70%), Positives = 51/57 (89%)
Frame = +3
Query: 513 KLKPMEVELKRLEDLSEAIVQDFTLMRKREEEMRDTNESTNNRVLFFSIFSMACLFG 683
KLKP+EVEL+RLED++++I +DF MR+REEEMR+TNESTN+RVL+ SIFSM CL G
Sbjct: 128 KLKPLEVELRRLEDMADSITKDFAFMRQREEEMRNTNESTNSRVLYLSIFSMLCLLG 184
Score = 78.2 bits (184), Expect = 6e-15
Identities = 54/173 (31%), Positives = 83/173 (47%), Gaps = 5/173 (2%)
Frame = +1
Query: 235 ITRQRVSAGEYDVTEIQGQRVDYIIKDSKGHILSQKDTVT--KGKFSFVTENYDMFEVCF 408
I + V GEY+ ++ + D++GH L +++ KGKF+F + YD+FE+C
Sbjct: 33 IHKNVVVTGEYEFSQGIQYTGSIHVTDTRGHTLYKRENFADLKGKFAFTADEYDIFEICI 92
Query: 409 ISKVPSERRGIPHLVSLDIKIGIEAKTYEGIGEVQN*SQWKWN*R---D*KTYQKLSFKI 579
+ P+ G VSL +K G+EAK Y+ I + + + R D F
Sbjct: 93 ENHPPAGHPGEKREVSLILKHGVEAKNYDDIAKAEKLKPLEVELRRLEDMADSITKDFAF 152
Query: 580 SHXXXXXXXX*EIPMNPRIIEFYSSVYSRWRASLGLATWQVLYLRRFFKAKKL 738
N R++ Y S++S LGLA WQVL+LR +FK+KKL
Sbjct: 153 MRQREEEMRNTNESTNSRVL--YLSIFS-MLCLLGLAIWQVLFLRNYFKSKKL 202
>AL117207-7|CAB60397.1| 211|Caenorhabditis elegans Hypothetical
protein Y60A3A.9 protein.
Length = 211
Score = 44.0 bits (99), Expect = 1e-04
Identities = 21/59 (35%), Positives = 36/59 (61%)
Frame = +3
Query: 513 KLKPMEVELKRLEDLSEAIVQDFTLMRKREEEMRDTNESTNNRVLFFSIFSMACLFGSG 689
KL +++ +++L D + I ++ R REE R T+ESTN+RV ++SI + L +G
Sbjct: 136 KLNELQLRIRQLLDQVDQITKEQNYQRYREERFRQTSESTNSRVFYWSIAQVVVLAITG 194
Score = 35.1 bits (77), Expect = 0.052
Identities = 31/145 (21%), Positives = 61/145 (42%), Gaps = 1/145 (0%)
Frame = +1
Query: 307 IKDSKGHILSQKDTVTKGKFSFVTENYDMFEVCFISKVPSERRGIPHLVSLDIKIGIEAK 486
+KD + ++ K +G+F+F + +C S + G V LDI+ G A+
Sbjct: 67 VKDPEDKVILSKLYTAEGRFTFTSNTPGEHVICIYSNSTAWFNGAQLRVHLDIQAGDHAQ 126
Query: 487 TYEGIGEVQN*SQWKWN*RD-*KTYQKLSFKISHXXXXXXXX*EIPMNPRIIEFYSSVYS 663
Y I + ++ + R +++ + ++ + + FY S+
Sbjct: 127 DYAQIAQKDKLNELQLRIRQLLDQVDQITKEQNYQRYREERFRQTSESTNSRVFYWSIAQ 186
Query: 664 RWRASLGLATWQVLYLRRFFKAKKL 738
++ WQ+ +LR FF+AKKL
Sbjct: 187 VVVLAI-TGAWQMRHLRGFFEAKKL 210
>AC199170-2|ABO33261.1| 167|Caenorhabditis elegans Hypothetical
protein T08D2.1 protein.
Length = 167
Score = 32.7 bits (71), Expect = 0.28
Identities = 17/67 (25%), Positives = 31/67 (46%)
Frame = +1
Query: 307 IKDSKGHILSQKDTVTKGKFSFVTENYDMFEVCFISKVPSERRGIPHLVSLDIKIGIEAK 486
+KD + ++ K ++G+F+F + +C S + G V LDI+ G A+
Sbjct: 67 VKDPEDKVILSKLYTSEGRFTFTSNTPGEHVICIYSNTTAWFNGAQLRVHLDIQAGDHAQ 126
Query: 487 TYEGIGE 507
Y + E
Sbjct: 127 DYAQVEE 133
>Z75550-15|CAA99931.2| 2003|Caenorhabditis elegans Hypothetical
protein F20G4.3 protein.
Length = 2003
Score = 29.9 bits (64), Expect = 2.0
Identities = 15/42 (35%), Positives = 24/42 (57%)
Frame = +3
Query: 495 RDRGGAKLKPMEVELKRLEDLSEAIVQDFTLMRKREEEMRDT 620
RDR KLK + + DL+E + +D +L+++RE R T
Sbjct: 1900 RDRLTNKLKDERRRAEEMTDLNETLSRDVSLLKQRETTARRT 1941
Score = 29.1 bits (62), Expect = 3.4
Identities = 14/49 (28%), Positives = 25/49 (51%)
Frame = +3
Query: 498 DRGGAKLKPMEVELKRLEDLSEAIVQDFTLMRKREEEMRDTNESTNNRV 644
DR A+++ + +L+ E + + R+R EEM D NE+ + V
Sbjct: 1880 DRQNARIRQLRTQLEDTEAERDRLTNKLKDERRRAEEMTDLNETLSRDV 1928
>Z75538-4|CAA99841.2| 2003|Caenorhabditis elegans Hypothetical protein
F20G4.3 protein.
Length = 2003
Score = 29.9 bits (64), Expect = 2.0
Identities = 15/42 (35%), Positives = 24/42 (57%)
Frame = +3
Query: 495 RDRGGAKLKPMEVELKRLEDLSEAIVQDFTLMRKREEEMRDT 620
RDR KLK + + DL+E + +D +L+++RE R T
Sbjct: 1900 RDRLTNKLKDERRRAEEMTDLNETLSRDVSLLKQRETTARRT 1941
Score = 29.1 bits (62), Expect = 3.4
Identities = 14/49 (28%), Positives = 25/49 (51%)
Frame = +3
Query: 498 DRGGAKLKPMEVELKRLEDLSEAIVQDFTLMRKREEEMRDTNESTNNRV 644
DR A+++ + +L+ E + + R+R EEM D NE+ + V
Sbjct: 1880 DRQNARIRQLRTQLEDTEAERDRLTNKLKDERRRAEEMTDLNETLSRDV 1928
>U49263-1|AAC47238.1| 2003|Caenorhabditis elegans non-muscle myosin
heavy chain II protein.
Length = 2003
Score = 29.9 bits (64), Expect = 2.0
Identities = 15/42 (35%), Positives = 24/42 (57%)
Frame = +3
Query: 495 RDRGGAKLKPMEVELKRLEDLSEAIVQDFTLMRKREEEMRDT 620
RDR KLK + + DL+E + +D +L+++RE R T
Sbjct: 1900 RDRLTNKLKDERRRAEEMTDLNETLSRDVSLLKQRETTARRT 1941
Score = 29.1 bits (62), Expect = 3.4
Identities = 14/49 (28%), Positives = 25/49 (51%)
Frame = +3
Query: 498 DRGGAKLKPMEVELKRLEDLSEAIVQDFTLMRKREEEMRDTNESTNNRV 644
DR A+++ + +L+ E + + R+R EEM D NE+ + V
Sbjct: 1880 DRQNARIRQLRTQLEDTEAERDRLTNKLKDERRRAEEMTDLNETLSRDV 1928
>AF014940-5|AAB63937.1| 203|Caenorhabditis elegans
Suppressor/enhancer of lin-12 protein9 protein.
Length = 203
Score = 29.9 bits (64), Expect = 2.0
Identities = 15/53 (28%), Positives = 27/53 (50%)
Frame = +3
Query: 525 MEVELKRLEDLSEAIVQDFTLMRKREEEMRDTNESTNNRVLFFSIFSMACLFG 683
+E ++ L ++ + M RE R+ NE+TN+RV+ ++ F L G
Sbjct: 132 LEEMVRELSSALMSVKHEQEYMEVRERVHRNINENTNSRVVMWAAFEAFVLVG 184
>Z68227-9|CAA92514.1| 64|Caenorhabditis elegans Hypothetical
protein F49C12.11 protein.
Length = 64
Score = 28.3 bits (60), Expect = 6.0
Identities = 15/42 (35%), Positives = 23/42 (54%)
Frame = +3
Query: 501 RGGAKLKPMEVELKRLEDLSEAIVQDFTLMRKREEEMRDTNE 626
R G K KP++ K +DLSE +D +K++EE + E
Sbjct: 4 RQGGKAKPLKAAKKTEKDLSE---EDVEFKKKQQEEAKKIKE 42
>Z68116-10|CAI79231.1| 182|Caenorhabditis elegans Hypothetical
protein F42F12.11 protein.
Length = 182
Score = 28.3 bits (60), Expect = 6.0
Identities = 11/43 (25%), Positives = 28/43 (65%)
Frame = +1
Query: 247 RVSAGEYDVTEIQGQRVDYIIKDSKGHILSQKDTVTKGKFSFV 375
R+ G Y+V++ G +VD ++ ++ +++S++ + +GK + V
Sbjct: 80 RLYDGHYEVSDGYGNQVDLVLTVAQRNLISERCFLLQGKIAHV 122
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,433,527
Number of Sequences: 27780
Number of extensions: 336136
Number of successful extensions: 892
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 849
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 892
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1735436670
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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