Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0379
         (802 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory recept...    24   1.6  
DQ855499-1|ABH88186.1|  124|Tribolium castaneum chemosensory pro...    23   2.1  
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      23   2.8  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      23   2.8  

>AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory receptor
           candidate 5 protein.
          Length = 522

 Score = 23.8 bits (49), Expect = 1.6
 Identities = 9/22 (40%), Positives = 15/22 (68%)
 Frame = -1

Query: 199 QSCLN*ICFVIGISTVINTNRK 134
           Q+CL+ +   + IST++ T RK
Sbjct: 67  QTCLDFLLLALNISTILTTVRK 88


>DQ855499-1|ABH88186.1|  124|Tribolium castaneum chemosensory
           protein 13 protein.
          Length = 124

 Score = 23.4 bits (48), Expect = 2.1
 Identities = 10/31 (32%), Positives = 20/31 (64%)
 Frame = +2

Query: 572 ADSTFIIKDLSEKYNKDLDAGLTSEQRVISH 664
           A +  + ++ + +YN +LDA L SE+ + S+
Sbjct: 11  ACTNVLSEEYTNQYNDELDAALKSERLMKSY 41


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 23.0 bits (47), Expect = 2.8
 Identities = 9/26 (34%), Positives = 13/26 (50%)
 Frame = +1

Query: 178 KFNSNMTVEVTNNIPENAPEKEKDMK 255
           KF +N    + N +    PE +KD K
Sbjct: 425 KFPTNFDALIVNEMRSEKPESKKDKK 450


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 23.0 bits (47), Expect = 2.8
 Identities = 9/26 (34%), Positives = 13/26 (50%)
 Frame = +1

Query: 178 KFNSNMTVEVTNNIPENAPEKEKDMK 255
           KF +N    + N +    PE +KD K
Sbjct: 317 KFPTNFDALIVNEMRSEKPESKKDKK 342


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 181,332
Number of Sequences: 336
Number of extensions: 3849
Number of successful extensions: 8
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21791490
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)