Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0379
(802 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC011583-1|AAH11583.1| 409|Homo sapiens chromosome 6 open readi... 52 2e-06
BC004869-1|AAH04869.2| 409|Homo sapiens chromosome 6 open readi... 52 2e-06
AL034371-1|CAI19992.2| 409|Homo sapiens chromosome 6 open readi... 52 2e-06
AK057793-1|BAB71576.1| 288|Homo sapiens protein ( Homo sapiens ... 52 2e-06
BC088359-1|AAH88359.1| 263|Homo sapiens metaxin 2 protein. 33 0.91
BC067831-1|AAH67831.1| 263|Homo sapiens metaxin 2 protein. 33 0.91
BC017271-1|AAH17271.1| 253|Homo sapiens metaxin 2 protein. 33 0.91
AF053551-1|AAC25105.1| 263|Homo sapiens metaxin 2 protein. 33 0.91
AC073069-1|AAX93188.1| 249|Homo sapiens unknown protein. 33 0.91
D87071-1|BAA13240.1| 2035|Homo sapiens KIAA0233 protein. 31 6.4
BC150271-1|AAI50272.1| 2035|Homo sapiens family with sequence si... 31 6.4
AB161230-1|BAF03565.1| 2090|Homo sapiens Mib protein. 31 6.4
>BC011583-1|AAH11583.1| 409|Homo sapiens chromosome 6 open reading
frame 168 protein.
Length = 409
Score = 52.4 bits (120), Expect = 2e-06
Identities = 22/63 (34%), Positives = 38/63 (60%)
Frame = +2
Query: 524 SKKGQLPFVELNGEEIADSTFIIKDLSEKYNKDLDAGLTSEQRVISHAMISMIENHLSWV 703
S +G++P++E N E+++ + FII L EK +L+ L +R IS A+ M+E H W
Sbjct: 142 SAQGKMPWIEYNHEKVSGTEFIIDFLEEKLGVNLNKNLGPHERAISRAVTKMVEEHFYWT 201
Query: 704 ILW 712
+ +
Sbjct: 202 LAY 204
Score = 46.0 bits (104), Expect = 2e-04
Identities = 20/39 (51%), Positives = 29/39 (74%), Gaps = 1/39 (2%)
Frame = +3
Query: 387 KDVVYLYQFSRTPLS-PSTSPYCLKVETWLRLAGIKYEN 500
KD + L+QF+R PS SP+CLK+ET+LR+A + Y+N
Sbjct: 97 KDAIILHQFARPNNGVPSLSPFCLKMETYLRMADLPYQN 135
>BC004869-1|AAH04869.2| 409|Homo sapiens chromosome 6 open reading
frame 168 protein.
Length = 409
Score = 52.4 bits (120), Expect = 2e-06
Identities = 22/63 (34%), Positives = 38/63 (60%)
Frame = +2
Query: 524 SKKGQLPFVELNGEEIADSTFIIKDLSEKYNKDLDAGLTSEQRVISHAMISMIENHLSWV 703
S +G++P++E N E+++ + FII L EK +L+ L +R IS A+ M+E H W
Sbjct: 142 SAQGKMPWIEYNHEKVSGTEFIIDFLEEKLGVNLNKNLGPHERAISRAVTKMVEEHFYWT 201
Query: 704 ILW 712
+ +
Sbjct: 202 LAY 204
Score = 46.0 bits (104), Expect = 2e-04
Identities = 20/39 (51%), Positives = 29/39 (74%), Gaps = 1/39 (2%)
Frame = +3
Query: 387 KDVVYLYQFSRTPLS-PSTSPYCLKVETWLRLAGIKYEN 500
KD + L+QF+R PS SP+CLK+ET+LR+A + Y+N
Sbjct: 97 KDAIILHQFARPNNGVPSLSPFCLKMETYLRMADLPYQN 135
>AL034371-1|CAI19992.2| 409|Homo sapiens chromosome 6 open reading
frame 168 protein.
Length = 409
Score = 52.4 bits (120), Expect = 2e-06
Identities = 22/63 (34%), Positives = 38/63 (60%)
Frame = +2
Query: 524 SKKGQLPFVELNGEEIADSTFIIKDLSEKYNKDLDAGLTSEQRVISHAMISMIENHLSWV 703
S +G++P++E N E+++ + FII L EK +L+ L +R IS A+ M+E H W
Sbjct: 142 SAQGKMPWIEYNHEKVSGTEFIIDFLEEKLGVNLNKNLGPHERAISRAVTKMVEEHFYWT 201
Query: 704 ILW 712
+ +
Sbjct: 202 LAY 204
Score = 46.0 bits (104), Expect = 2e-04
Identities = 20/39 (51%), Positives = 29/39 (74%), Gaps = 1/39 (2%)
Frame = +3
Query: 387 KDVVYLYQFSRTPLS-PSTSPYCLKVETWLRLAGIKYEN 500
KD + L+QF+R PS SP+CLK+ET+LR+A + Y+N
Sbjct: 97 KDAIILHQFARPNNGVPSLSPFCLKMETYLRMADLPYQN 135
>AK057793-1|BAB71576.1| 288|Homo sapiens protein ( Homo sapiens
cDNA FLJ25064 fis, clone CBL04883. ).
Length = 288
Score = 52.4 bits (120), Expect = 2e-06
Identities = 22/63 (34%), Positives = 38/63 (60%)
Frame = +2
Query: 524 SKKGQLPFVELNGEEIADSTFIIKDLSEKYNKDLDAGLTSEQRVISHAMISMIENHLSWV 703
S +G++P++E N E+++ + FII L EK +L+ L +R IS A+ M+E H W
Sbjct: 21 SAQGKMPWIEYNHEKVSGTEFIIDFLEEKLGVNLNKNLGPHERAISRAVTKMVEEHFYWT 80
Query: 704 ILW 712
+ +
Sbjct: 81 LAY 83
>BC088359-1|AAH88359.1| 263|Homo sapiens metaxin 2 protein.
Length = 263
Score = 33.5 bits (73), Expect = 0.91
Identities = 17/64 (26%), Positives = 34/64 (53%)
Frame = +2
Query: 503 RAHAKYRSKKGQLPFVELNGEEIADSTFIIKDLSEKYNKDLDAGLTSEQRVISHAMISMI 682
RA+A+Y S G++PF+ + + +++ I++ + K L GL Q+ A + ++
Sbjct: 60 RANAEYMSPSGKVPFIHVGNQVVSELGPIVQFVKAK-GHSLSDGLEEVQKAEMKAYMELV 118
Query: 683 ENHL 694
N L
Sbjct: 119 NNML 122
>BC067831-1|AAH67831.1| 263|Homo sapiens metaxin 2 protein.
Length = 263
Score = 33.5 bits (73), Expect = 0.91
Identities = 17/64 (26%), Positives = 34/64 (53%)
Frame = +2
Query: 503 RAHAKYRSKKGQLPFVELNGEEIADSTFIIKDLSEKYNKDLDAGLTSEQRVISHAMISMI 682
RA+A+Y S G++PF+ + + +++ I++ + K L GL Q+ A + ++
Sbjct: 60 RANAEYMSPSGKVPFIHVGNQVVSELGPIVQFVKAK-GHSLSDGLEEVQKAEMKAYMELV 118
Query: 683 ENHL 694
N L
Sbjct: 119 NNML 122
>BC017271-1|AAH17271.1| 253|Homo sapiens metaxin 2 protein.
Length = 253
Score = 33.5 bits (73), Expect = 0.91
Identities = 17/64 (26%), Positives = 34/64 (53%)
Frame = +2
Query: 503 RAHAKYRSKKGQLPFVELNGEEIADSTFIIKDLSEKYNKDLDAGLTSEQRVISHAMISMI 682
RA+A+Y S G++PF+ + + +++ I++ + K L GL Q+ A + ++
Sbjct: 50 RANAEYMSPSGKVPFIHVGNQVVSELGPIVQFVKAK-GHSLSDGLEEVQKAEMKAYMELV 108
Query: 683 ENHL 694
N L
Sbjct: 109 NNML 112
>AF053551-1|AAC25105.1| 263|Homo sapiens metaxin 2 protein.
Length = 263
Score = 33.5 bits (73), Expect = 0.91
Identities = 17/64 (26%), Positives = 34/64 (53%)
Frame = +2
Query: 503 RAHAKYRSKKGQLPFVELNGEEIADSTFIIKDLSEKYNKDLDAGLTSEQRVISHAMISMI 682
RA+A+Y S G++PF+ + + +++ I++ + K L GL Q+ A + ++
Sbjct: 60 RANAEYMSPSGKVPFIHVGNQVVSELGPIVQFVKAK-GHSLSDGLEEVQKAEMKAYMELV 118
Query: 683 ENHL 694
N L
Sbjct: 119 NNML 122
>AC073069-1|AAX93188.1| 249|Homo sapiens unknown protein.
Length = 249
Score = 33.5 bits (73), Expect = 0.91
Identities = 17/64 (26%), Positives = 34/64 (53%)
Frame = +2
Query: 503 RAHAKYRSKKGQLPFVELNGEEIADSTFIIKDLSEKYNKDLDAGLTSEQRVISHAMISMI 682
RA+A+Y S G++PF+ + + +++ I++ + K L GL Q+ A + ++
Sbjct: 46 RANAEYMSPSGKVPFIHVGNQVVSELGPIVQFVKAK-GHSLSDGLEEVQKAEMKAYMELV 104
Query: 683 ENHL 694
N L
Sbjct: 105 NNML 108
>D87071-1|BAA13240.1| 2035|Homo sapiens KIAA0233 protein.
Length = 2035
Score = 30.7 bits (66), Expect = 6.4
Identities = 15/40 (37%), Positives = 23/40 (57%), Gaps = 3/40 (7%)
Frame = +3
Query: 456 KVETWLRLAGIKYENVEHM---PNIVPKKANCRSWN*MAK 566
+ E W R+AG+ + +E + PN VP +CRS+ M K
Sbjct: 634 RTEEWQRMAGVNTDRLEPLRGEPNPVPNFIHCRSYLDMLK 673
>BC150271-1|AAI50272.1| 2035|Homo sapiens family with sequence
similarity 38, member A protein.
Length = 2035
Score = 30.7 bits (66), Expect = 6.4
Identities = 15/40 (37%), Positives = 23/40 (57%), Gaps = 3/40 (7%)
Frame = +3
Query: 456 KVETWLRLAGIKYENVEHM---PNIVPKKANCRSWN*MAK 566
+ E W R+AG+ + +E + PN VP +CRS+ M K
Sbjct: 634 RTEEWQRMAGVNTDRLEPLRGEPNPVPNFIHCRSYLDMLK 673
>AB161230-1|BAF03565.1| 2090|Homo sapiens Mib protein.
Length = 2090
Score = 30.7 bits (66), Expect = 6.4
Identities = 15/40 (37%), Positives = 23/40 (57%), Gaps = 3/40 (7%)
Frame = +3
Query: 456 KVETWLRLAGIKYENVEHM---PNIVPKKANCRSWN*MAK 566
+ E W R+AG+ + +E + PN VP +CRS+ M K
Sbjct: 689 RTEEWQRMAGVNTDRLEPLRGEPNPVPNFIHCRSYLDMLK 728
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 111,993,015
Number of Sequences: 237096
Number of extensions: 2225800
Number of successful extensions: 5655
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 5413
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5655
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9869080686
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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