Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0377
         (747 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY584475-1|AAS93634.1|  209|Tribolium castaneum homothorax protein.    23   3.4  
AJ518941-1|CAD57735.1|  456|Tribolium castaneum homothorax protein.    23   3.4  
AY043292-1|AAK96031.1|  323|Tribolium castaneum homeodomain tran...    21   7.9  
AJ845189-1|CAH60166.1|  515|Tribolium castaneum putative esteras...    21   7.9  
AJ845188-1|CAH60165.1|  517|Tribolium castaneum putative esteras...    21   7.9  
AJ845187-1|CAH60164.1|  515|Tribolium castaneum esterase protein.      21   7.9  
AJ844897-1|CAH59956.1|  517|Tribolium castaneum esterase protein.      21   7.9  
AF260821-1|AAG02019.1|  134|Tribolium castaneum alpha-esterase l...    21   7.9  
AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless pr...    21   7.9  

>AY584475-1|AAS93634.1|  209|Tribolium castaneum homothorax protein.
          Length = 209

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 10/30 (33%), Positives = 15/30 (50%)
 Frame = -2

Query: 461 RKLRPSQPDRPRQWSPCSKFRPPSRARAGT 372
           + L  S PD   +W P  ++  P  ARA +
Sbjct: 106 QSLDASDPDAMGKWCPRREWSSPPDARAAS 135


>AJ518941-1|CAD57735.1|  456|Tribolium castaneum homothorax protein.
          Length = 456

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 10/30 (33%), Positives = 15/30 (50%)
 Frame = -2

Query: 461 RKLRPSQPDRPRQWSPCSKFRPPSRARAGT 372
           + L  S PD   +W P  ++  P  ARA +
Sbjct: 262 QSLDASDPDAMGKWCPRREWSSPPDARAAS 291


>AY043292-1|AAK96031.1|  323|Tribolium castaneum homeodomain
           transcription factor Prothoraxlessprotein.
          Length = 323

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 8/29 (27%), Positives = 14/29 (48%)
 Frame = +2

Query: 308 MATNNTNGHCENYHKMESLKKLFQPVHEK 394
           + T + N H   +H  E   +  QP H++
Sbjct: 157 LTTQSMNNHHMGHHMQEQHPQHHQPHHQQ 185


>AJ845189-1|CAH60166.1|  515|Tribolium castaneum putative esterase
           protein.
          Length = 515

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 10/28 (35%), Positives = 14/28 (50%)
 Frame = -3

Query: 502 Y*SDVIRNILRQHRESCGHPNLTDPDNG 419
           Y  D++ N+  Q  E C   N+  P NG
Sbjct: 65  YSKDLLFNLPAQGSEDCLFLNVYTPKNG 92


>AJ845188-1|CAH60165.1|  517|Tribolium castaneum putative esterase
           protein.
          Length = 517

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 10/28 (35%), Positives = 14/28 (50%)
 Frame = -3

Query: 502 Y*SDVIRNILRQHRESCGHPNLTDPDNG 419
           Y  D++ N+  Q  E C   N+  P NG
Sbjct: 67  YSKDLLFNLPAQGSEDCLFLNVYTPKNG 94


>AJ845187-1|CAH60164.1|  515|Tribolium castaneum esterase protein.
          Length = 515

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 10/28 (35%), Positives = 14/28 (50%)
 Frame = -3

Query: 502 Y*SDVIRNILRQHRESCGHPNLTDPDNG 419
           Y  D++ N+  Q  E C   N+  P NG
Sbjct: 65  YSKDLLFNLPAQGSEDCLFLNVYTPKNG 92


>AJ844897-1|CAH59956.1|  517|Tribolium castaneum esterase protein.
          Length = 517

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 10/28 (35%), Positives = 14/28 (50%)
 Frame = -3

Query: 502 Y*SDVIRNILRQHRESCGHPNLTDPDNG 419
           Y  D++ N+  Q  E C   N+  P NG
Sbjct: 67  YSKDLLFNLPAQGSEDCLFLNVYTPKNG 94


>AF260821-1|AAG02019.1|  134|Tribolium castaneum alpha-esterase like
           protein E2 protein.
          Length = 134

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 10/28 (35%), Positives = 14/28 (50%)
 Frame = -3

Query: 502 Y*SDVIRNILRQHRESCGHPNLTDPDNG 419
           Y  D++ N+  Q  E C   N+  P NG
Sbjct: 39  YSKDLLFNLPAQGSEDCLFLNVYTPKNG 66


>AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless
           protein.
          Length = 325

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 8/29 (27%), Positives = 14/29 (48%)
 Frame = +2

Query: 308 MATNNTNGHCENYHKMESLKKLFQPVHEK 394
           + T + N H   +H  E   +  QP H++
Sbjct: 159 LTTQSMNNHHMGHHMQEQHPQHHQPHHQQ 187


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 156,858
Number of Sequences: 336
Number of extensions: 3182
Number of successful extensions: 14
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 19923648
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)