Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0375
         (709 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI0000DC08C2 Cluster: UPI0000DC08C2 related cluster; n...    36   0.74 
UniRef50_Q2GHQ2 Cluster: Conserved domain protein; n=2; Ehrlichi...    34   3.9  
UniRef50_UPI000023F4A7 Cluster: hypothetical protein FG10292.1; ...    33   6.9  
UniRef50_A6LSH1 Cluster: Peptidase U4, sporulation factor SpoIIG...    33   6.9  
UniRef50_A2QD76 Cluster: Putative uncharacterized protein; n=1; ...    33   9.1  

>UniRef50_UPI0000DC08C2 Cluster: UPI0000DC08C2 related cluster; n=2;
           Rattus norvegicus|Rep: UPI0000DC08C2 UniRef100 entry -
           Rattus norvegicus
          Length = 271

 Score = 36.3 bits (80), Expect = 0.74
 Identities = 21/64 (32%), Positives = 32/64 (50%), Gaps = 3/64 (4%)
 Frame = +3

Query: 30  LYVVLQLSLKFSYQH*KINRHIPNYLKLKNDQYCFCILRYT*NHFMI---CHISSYTNTK 200
           +Y+ + +    ++ H  IN HI  Y  +K    C C+ RYT  H  I    HI +YT+  
Sbjct: 15  IYIYIYIIHANAHAHTHINIHIYFYFLIKK-YACVCVYRYTYTHIYIHIHIHIHTYTHIY 73

Query: 201 TFPT 212
           T+ T
Sbjct: 74  TYYT 77


>UniRef50_Q2GHQ2 Cluster: Conserved domain protein; n=2; Ehrlichia
           chaffeensis|Rep: Conserved domain protein - Ehrlichia
           chaffeensis (strain Arkansas)
          Length = 176

 Score = 33.9 bits (74), Expect = 3.9
 Identities = 16/57 (28%), Positives = 33/57 (57%), Gaps = 5/57 (8%)
 Frame = -1

Query: 388 NVKNLIHSFYIGLLRHLRFISIRAF--VFLYNICYGNYTIKFTL*RFLI---SYVVF 233
           N  N++HSFYI + ++ +F +++     F +   Y N+TIK     ++I   S++++
Sbjct: 7   NSDNIVHSFYIAIQKYFKFTNLKKHCNTFRFTNFYFNHTIKCRAANYIIYMQSFIIY 63


>UniRef50_UPI000023F4A7 Cluster: hypothetical protein FG10292.1;
           n=1; Gibberella zeae PH-1|Rep: hypothetical protein
           FG10292.1 - Gibberella zeae PH-1
          Length = 927

 Score = 33.1 bits (72), Expect = 6.9
 Identities = 15/59 (25%), Positives = 30/59 (50%)
 Frame = -1

Query: 388 NVKNLIHSFYIGLLRHLRFISIRAFVFLYNICYGNYTIKFTL*RFLISYVVFDSLLSYI 212
           +V   IH+F++GL   + F+  R  +   N+CY N   K  +  F     + D+++ ++
Sbjct: 482 SVAEAIHTFHVGLADQVSFLEPRGLINTGNMCYMNSISKRAVHSFKSDTPLIDAMIMFM 540


>UniRef50_A6LSH1 Cluster: Peptidase U4, sporulation factor SpoIIGA;
           n=1; Clostridium beijerinckii NCIMB 8052|Rep: Peptidase
           U4, sporulation factor SpoIIGA - Clostridium
           beijerinckii NCIMB 8052
          Length = 296

 Score = 33.1 bits (72), Expect = 6.9
 Identities = 15/37 (40%), Positives = 25/37 (67%), Gaps = 2/37 (5%)
 Frame = -1

Query: 283 YTIKFTL*RFLISYVVFDSLLSYIVGKVFV--FVYEL 179
           Y+IK+ +   +I Y++F  L+ YI  K+FV  FV+E+
Sbjct: 139 YSIKYIMLGVMIMYIIFSRLVEYIRDKLFVRNFVFEI 175


>UniRef50_A2QD76 Cluster: Putative uncharacterized protein; n=1;
           Aspergillus niger|Rep: Putative uncharacterized protein
           - Aspergillus niger
          Length = 323

 Score = 32.7 bits (71), Expect = 9.1
 Identities = 18/49 (36%), Positives = 28/49 (57%)
 Frame = -2

Query: 360 TSVFYVIYASFQLELLFFSTISATVITR*SSHYDDF*FLTSFLIHCYLI 214
           T++  V  +S    LLFFS +S+ + +  S     + F TS L+HCYL+
Sbjct: 257 TTIIIVASSSVATHLLFFSKLSSYLQSG-SGVLASYNFSTSHLVHCYLL 304


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 664,489,803
Number of Sequences: 1657284
Number of extensions: 13478986
Number of successful extensions: 26185
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 25343
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26176
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 56611575523
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)