Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0374
         (775 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_07_0016 - 40476014-40476333,40476598-40476740,40476945-404790...    33   0.19 
09_04_0739 - 19833462-19834456,19835272-19835333,19835846-198359...    33   0.25 
05_06_0215 + 26444752-26444803,26444899-26445044,26445368-264455...    30   2.3  
07_03_0870 - 22177711-22177818,22177954-22178176,22178310-221784...    29   4.1  
07_03_0204 - 15150854-15151147,15152230-15153689,15154055-151542...    29   4.1  
06_02_0325 + 14428065-14428799,14428916-14428993,14429607-144298...    28   7.2  

>01_07_0016 -
           40476014-40476333,40476598-40476740,40476945-40479099,
           40479205-40480047,40480176-40480269,40480356-40481207,
           40481367-40481437,40481750-40481821,40481977-40482019
          Length = 1530

 Score = 33.5 bits (73), Expect = 0.19
 Identities = 23/68 (33%), Positives = 27/68 (39%), Gaps = 1/68 (1%)
 Frame = +1

Query: 496 RWSQQSKKK-HRTEKDREYTKKFQFVEAKQTFGG**RGERSDLCRWSRNHRAECIHRGRT 672
           RW    K+K  R+EK  +  K     E KQTF G    E     +W   HR E    G  
Sbjct: 174 RWGPDDKEKDSRSEKKLDAEKDESHAE-KQTFTGRLLTETDSRDKWRPRHRQESHSAGTG 232

Query: 673 VYTRKPSF 696
            Y   P F
Sbjct: 233 TYRAAPGF 240


>09_04_0739 -
           19833462-19834456,19835272-19835333,19835846-19835937,
           19836271-19836540,19836795-19836913,19836947-19837778
          Length = 789

 Score = 33.1 bits (72), Expect = 0.25
 Identities = 22/63 (34%), Positives = 34/63 (53%), Gaps = 2/63 (3%)
 Frame = +2

Query: 434 RTRFGHKVFWSLQ*PQRKS*FGGVNSQRKSI--ERKRTESILKNSSLSKQSKHSEGNKGE 607
           +T  G K   SL   + K   G +N+  K+I  E K+      NSSLSKQ+ +  G+K E
Sbjct: 145 KTTNGLKDTSSLSLEKEKGKLGKINASHKTIGAENKKPMLTKSNSSLSKQALNGLGDKKE 204

Query: 608 SVQ 616
           +++
Sbjct: 205 AIK 207


>05_06_0215 +
           26444752-26444803,26444899-26445044,26445368-26445517,
           26445595-26445739,26446550-26446735,26446813-26446886,
           26446966-26447047,26447470-26447858
          Length = 407

 Score = 29.9 bits (64), Expect = 2.3
 Identities = 20/45 (44%), Positives = 25/45 (55%)
 Frame = +1

Query: 79  SKFSLGHCELLALMKEDFKNVLQASVQKQWDEVKRAMSAFTYFDG 213
           +K  L  CELLA   E  KN+L   VQ  W+E  +  S F+Y DG
Sbjct: 211 NKMELMRCELLAKRTEGIKNILVEMVQ-TWEE--KYDSPFSY-DG 251


>07_03_0870 -
           22177711-22177818,22177954-22178176,22178310-22178470,
           22178558-22178733,22178865-22178970,22179078-22179221,
           22179300-22179455,22179855-22179959,22180067-22180126,
           22180160-22180197,22180481-22180538
          Length = 444

 Score = 29.1 bits (62), Expect = 4.1
 Identities = 18/61 (29%), Positives = 35/61 (57%), Gaps = 2/61 (3%)
 Frame = -3

Query: 557 FLVYSLSFSVLCFFF--DC*LHRITTFSAVIVGSKILCVQILFALVWRYIWIIKTVKITS 384
           FL+Y L+ S+   F   D   H + T+ A+     ++ +  ++ L+ RY+ +IK +K+TS
Sbjct: 309 FLIYVLTLSIFPGFLSEDTGAHSLGTWYALT----LIAMYNVWDLIGRYLPLIKCIKLTS 364

Query: 383 K 381
           +
Sbjct: 365 R 365


>07_03_0204 -
           15150854-15151147,15152230-15153689,15154055-15154266,
           15155123-15155275,15155569-15155630,15155733-15155785,
           15156380-15156452,15156499-15156619,15156699-15156878,
           15157333-15157391
          Length = 888

 Score = 29.1 bits (62), Expect = 4.1
 Identities = 15/41 (36%), Positives = 21/41 (51%)
 Frame = +3

Query: 411 PYIPPDESEQDLDTKYFGAYNNRRESRDSVESTVKEKA*NG 533
           PY PP     D    Y G  ++R+ S DS ES V ++  +G
Sbjct: 339 PYYPPYPPVDDPRYHYSGRKSSRKHSSDSKESEVLDEGSDG 379


>06_02_0325 +
           14428065-14428799,14428916-14428993,14429607-14429844,
           14431199-14431296,14431770-14432063,14432418-14432702
          Length = 575

 Score = 28.3 bits (60), Expect = 7.2
 Identities = 10/45 (22%), Positives = 23/45 (51%)
 Frame = +2

Query: 554 KNSSLSKQSKHSEGNKGESVQISVDGPEIIELSASTAAVPSTQEN 688
           +   + K+ K       ++  +S+  P  ++ S+ + + PST+EN
Sbjct: 5   RGRKMGKKGKSKASTTADASPMSLSSPSTVDASSKSPSSPSTEEN 49


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,512,332
Number of Sequences: 37544
Number of extensions: 488375
Number of successful extensions: 1348
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1307
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1348
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2068401984
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)