Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0372
(762 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z68014-5|CAA92027.1| 353|Caenorhabditis elegans Hypothetical pr... 113 1e-25
U00036-8|AAL06052.1| 318|Caenorhabditis elegans Hypothetical pr... 92 3e-19
U00036-7|AAK29858.2| 319|Caenorhabditis elegans Hypothetical pr... 92 3e-19
U00036-6|AAK29853.1| 377|Caenorhabditis elegans Hypothetical pr... 92 3e-19
U00036-5|AAT92064.1| 446|Caenorhabditis elegans Hypothetical pr... 92 3e-19
Z50794-8|CAA90655.2| 450|Caenorhabditis elegans Hypothetical pr... 30 1.6
Z49937-9|CAO78727.1| 450|Caenorhabditis elegans Hypothetical pr... 30 1.6
AF039053-10|AAC25884.2| 361|Caenorhabditis elegans Seven tm rec... 29 3.6
Z99102-1|CAB11776.1| 523|Caenorhabditis elegans Hypothetical pr... 28 8.3
>Z68014-5|CAA92027.1| 353|Caenorhabditis elegans Hypothetical
protein W04G3.5 protein.
Length = 353
Score = 113 bits (273), Expect = 1e-25
Identities = 47/87 (54%), Positives = 71/87 (81%)
Frame = +1
Query: 256 PELADLIANRLGVRKGGCSVYHKTNRETIVEIADSIRGKNIYIIQTGTKDVNNNIMELLI 435
PELA +++ RL +R G +VY+KTNRET V+I S+RGK+++I+Q+G+K+VNN++MELL+
Sbjct: 20 PELAKMVSERLEIRLGEATVYNKTNRETSVDIKQSVRGKHVFILQSGSKNVNNDVMELLV 79
Query: 436 MAYACKTSSASSIVGVIPYLPYSKHAK 516
+ YACKTS + +I ++PYLPYSK +
Sbjct: 80 LIYACKTSMSKTITVIMPYLPYSKQCR 106
Score = 113 bits (272), Expect = 1e-25
Identities = 46/80 (57%), Positives = 67/80 (83%)
Frame = +3
Query: 510 CKMRKRGCIVSKLLAQMMCKSGLSHIITMDLHQKEIQGFFDCPVDNLRASPFLLQYIQES 689
C+M +R I KL+A+M+CK+G S ++++DL++KEIQGFF CPVDNLRASPF LQ+I+ +
Sbjct: 105 CRMLRRSSIAMKLVAEMICKAGASRLVSLDLYKKEIQGFFSCPVDNLRASPFFLQHIKTN 164
Query: 690 IPDYRNSVIVARNPGSAKKS 749
IPDY+N++IVA++PG K+
Sbjct: 165 IPDYKNAIIVAKSPGVMNKA 184
>U00036-8|AAL06052.1| 318|Caenorhabditis elegans Hypothetical
protein R151.2c protein.
Length = 318
Score = 92.3 bits (219), Expect = 3e-19
Identities = 43/78 (55%), Positives = 58/78 (74%)
Frame = +3
Query: 513 KMRKRGCIVSKLLAQMMCKSGLSHIITMDLHQKEIQGFFDCPVDNLRASPFLLQYIQESI 692
K + R I +KL+A M+ +G HIITMDLH +IQGFFD PVDNL A P +L+YI+ESI
Sbjct: 99 KDKSRAPISAKLVANMLSVAGADHIITMDLHASQIQGFFDIPVDNLYAEPAILKYIKESI 158
Query: 693 PDYRNSVIVARNPGSAKK 746
P+++ SVIV+ + G AK+
Sbjct: 159 PNWQTSVIVSPDAGGAKR 176
Score = 81.4 bits (192), Expect = 6e-16
Identities = 37/87 (42%), Positives = 58/87 (66%)
Frame = +1
Query: 256 PELADLIANRLGVRKGGCSVYHKTNRETIVEIADSIRGKNIYIIQTGTKDVNNNIMELLI 435
P+L+ I RL + S+ +N+ET VEI +S+RG+++YIIQ+ ++N+N+MELLI
Sbjct: 12 PDLSTRICERLQLEVSKASLKKFSNKETNVEIGESVRGEDVYIIQSAAGEINDNLMELLI 71
Query: 436 MAYACKTSSASSIVGVIPYLPYSKHAK 516
M ACK +S+ + VIP PY++ K
Sbjct: 72 MINACKIASSCRVAAVIPAFPYARQDK 98
>U00036-7|AAK29858.2| 319|Caenorhabditis elegans Hypothetical
protein R151.2b protein.
Length = 319
Score = 92.3 bits (219), Expect = 3e-19
Identities = 43/78 (55%), Positives = 58/78 (74%)
Frame = +3
Query: 513 KMRKRGCIVSKLLAQMMCKSGLSHIITMDLHQKEIQGFFDCPVDNLRASPFLLQYIQESI 692
K + R I +KL+A M+ +G HIITMDLH +IQGFFD PVDNL A P +L+YI+ESI
Sbjct: 100 KDKSRAPISAKLVANMLSVAGADHIITMDLHASQIQGFFDIPVDNLYAEPAILKYIKESI 159
Query: 693 PDYRNSVIVARNPGSAKK 746
P+++ SVIV+ + G AK+
Sbjct: 160 PNWQTSVIVSPDAGGAKR 177
Score = 81.4 bits (192), Expect = 6e-16
Identities = 37/87 (42%), Positives = 58/87 (66%)
Frame = +1
Query: 256 PELADLIANRLGVRKGGCSVYHKTNRETIVEIADSIRGKNIYIIQTGTKDVNNNIMELLI 435
P+L+ I RL + S+ +N+ET VEI +S+RG+++YIIQ+ ++N+N+MELLI
Sbjct: 13 PDLSTRICERLQLEVSKASLKKFSNKETNVEIGESVRGEDVYIIQSAAGEINDNLMELLI 72
Query: 436 MAYACKTSSASSIVGVIPYLPYSKHAK 516
M ACK +S+ + VIP PY++ K
Sbjct: 73 MINACKIASSCRVAAVIPAFPYARQDK 99
>U00036-6|AAK29853.1| 377|Caenorhabditis elegans Hypothetical
protein R151.2a protein.
Length = 377
Score = 92.3 bits (219), Expect = 3e-19
Identities = 43/78 (55%), Positives = 58/78 (74%)
Frame = +3
Query: 513 KMRKRGCIVSKLLAQMMCKSGLSHIITMDLHQKEIQGFFDCPVDNLRASPFLLQYIQESI 692
K + R I +KL+A M+ +G HIITMDLH +IQGFFD PVDNL A P +L+YI+ESI
Sbjct: 158 KDKSRAPISAKLVANMLSVAGADHIITMDLHASQIQGFFDIPVDNLYAEPAILKYIKESI 217
Query: 693 PDYRNSVIVARNPGSAKK 746
P+++ SVIV+ + G AK+
Sbjct: 218 PNWQTSVIVSPDAGGAKR 235
Score = 81.4 bits (192), Expect = 6e-16
Identities = 37/87 (42%), Positives = 58/87 (66%)
Frame = +1
Query: 256 PELADLIANRLGVRKGGCSVYHKTNRETIVEIADSIRGKNIYIIQTGTKDVNNNIMELLI 435
P+L+ I RL + S+ +N+ET VEI +S+RG+++YIIQ+ ++N+N+MELLI
Sbjct: 71 PDLSTRICERLQLEVSKASLKKFSNKETNVEIGESVRGEDVYIIQSAAGEINDNLMELLI 130
Query: 436 MAYACKTSSASSIVGVIPYLPYSKHAK 516
M ACK +S+ + VIP PY++ K
Sbjct: 131 MINACKIASSCRVAAVIPAFPYARQDK 157
>U00036-5|AAT92064.1| 446|Caenorhabditis elegans Hypothetical
protein R151.2d protein.
Length = 446
Score = 92.3 bits (219), Expect = 3e-19
Identities = 43/78 (55%), Positives = 58/78 (74%)
Frame = +3
Query: 513 KMRKRGCIVSKLLAQMMCKSGLSHIITMDLHQKEIQGFFDCPVDNLRASPFLLQYIQESI 692
K + R I +KL+A M+ +G HIITMDLH +IQGFFD PVDNL A P +L+YI+ESI
Sbjct: 227 KDKSRAPISAKLVANMLSVAGADHIITMDLHASQIQGFFDIPVDNLYAEPAILKYIKESI 286
Query: 693 PDYRNSVIVARNPGSAKK 746
P+++ SVIV+ + G AK+
Sbjct: 287 PNWQTSVIVSPDAGGAKR 304
Score = 81.4 bits (192), Expect = 6e-16
Identities = 37/87 (42%), Positives = 58/87 (66%)
Frame = +1
Query: 256 PELADLIANRLGVRKGGCSVYHKTNRETIVEIADSIRGKNIYIIQTGTKDVNNNIMELLI 435
P+L+ I RL + S+ +N+ET VEI +S+RG+++YIIQ+ ++N+N+MELLI
Sbjct: 140 PDLSTRICERLQLEVSKASLKKFSNKETNVEIGESVRGEDVYIIQSAAGEINDNLMELLI 199
Query: 436 MAYACKTSSASSIVGVIPYLPYSKHAK 516
M ACK +S+ + VIP PY++ K
Sbjct: 200 MINACKIASSCRVAAVIPAFPYARQDK 226
>Z50794-8|CAA90655.2| 450|Caenorhabditis elegans Hypothetical
protein F59F5.1 protein.
Length = 450
Score = 30.3 bits (65), Expect = 1.6
Identities = 15/44 (34%), Positives = 22/44 (50%)
Frame = +1
Query: 358 SIRGKNIYIIQTGTKDVNNNIMELLIMAYACKTSSASSIVGVIP 489
+I G I +TG + V N +E +I Y C A + V V+P
Sbjct: 40 AICGFYILFAETGVRQVMNGFVEPVIKTYNCTKDQADTAVLVVP 83
>Z49937-9|CAO78727.1| 450|Caenorhabditis elegans Hypothetical
protein F59F5.1 protein.
Length = 450
Score = 30.3 bits (65), Expect = 1.6
Identities = 15/44 (34%), Positives = 22/44 (50%)
Frame = +1
Query: 358 SIRGKNIYIIQTGTKDVNNNIMELLIMAYACKTSSASSIVGVIP 489
+I G I +TG + V N +E +I Y C A + V V+P
Sbjct: 40 AICGFYILFAETGVRQVMNGFVEPVIKTYNCTKDQADTAVLVVP 83
>AF039053-10|AAC25884.2| 361|Caenorhabditis elegans Seven tm
receptor protein 255 protein.
Length = 361
Score = 29.1 bits (62), Expect = 3.6
Identities = 23/59 (38%), Positives = 28/59 (47%), Gaps = 9/59 (15%)
Frame = -2
Query: 416 LLFTSLVPVCM---------I*IFLPRIESAISTMVSLLVLWYTEQPPLRTPRRLAIKS 267
L+F SL+PV + + IFL + AI VSL V WY PL P IKS
Sbjct: 255 LVFQSLIPVLLLHIPASIIFVTIFLGKSTEAIGETVSLTVAWYPALNPL--PALFIIKS 311
>Z99102-1|CAB11776.1| 523|Caenorhabditis elegans Hypothetical
protein B0331.2 protein.
Length = 523
Score = 27.9 bits (59), Expect = 8.3
Identities = 9/28 (32%), Positives = 16/28 (57%)
Frame = +2
Query: 305 VVQYTTRLTERPLWKLLIQFVARIFISY 388
++QY TE W +++ F+ F+SY
Sbjct: 5 LLQYAPNWTEHATWLVIVAFIFAFFVSY 32
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,313,362
Number of Sequences: 27780
Number of extensions: 402409
Number of successful extensions: 904
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 864
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 904
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1819579054
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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