Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0372
         (762 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.            25   0.77 
DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450 monoo...    23   4.1  
DQ026034-1|AAY87893.1|  569|Apis mellifera nicotinic acetylcholi...    22   7.1  
DQ026033-1|AAY87892.1|  569|Apis mellifera nicotinic acetylcholi...    22   7.1  
DQ026031-1|AAY87890.1|  601|Apis mellifera nicotinic acetylcholi...    21   9.4  
AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase prot...    21   9.4  

>AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.
          Length = 493

 Score = 25.0 bits (52), Expect = 0.77
 Identities = 12/19 (63%), Positives = 13/19 (68%)
 Frame = -1

Query: 753 SSFSLQSQDSGPL*PNYGN 697
           SSF  QS+D GP  PN GN
Sbjct: 345 SSFDFQSKDQGP--PNDGN 361


>DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 517

 Score = 22.6 bits (46), Expect = 4.1
 Identities = 11/32 (34%), Positives = 17/32 (53%)
 Frame = +3

Query: 630 DCPVDNLRASPFLLQYIQESIPDYRNSVIVAR 725
           D  +DNLR + +L   I ES+     +  +AR
Sbjct: 369 DLTIDNLRKAKYLRACITESLRLIPTTTCIAR 400


>DQ026034-1|AAY87893.1|  569|Apis mellifera nicotinic acetylcholine
           receptor alpha4subunit protein.
          Length = 569

 Score = 21.8 bits (44), Expect = 7.1
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = +1

Query: 16  KYVSLM*MKYFLWFFQIKYL 75
           KYV+++  + FLW F +  L
Sbjct: 512 KYVAMVLDRLFLWIFTLAVL 531


>DQ026033-1|AAY87892.1|  569|Apis mellifera nicotinic acetylcholine
           receptor alpha4subunit protein.
          Length = 569

 Score = 21.8 bits (44), Expect = 7.1
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = +1

Query: 16  KYVSLM*MKYFLWFFQIKYL 75
           KYV+++  + FLW F +  L
Sbjct: 512 KYVAMVLDRLFLWIFTLAVL 531


>DQ026031-1|AAY87890.1|  601|Apis mellifera nicotinic acetylcholine
           receptor alpha1subunit protein.
          Length = 601

 Score = 21.4 bits (43), Expect = 9.4
 Identities = 7/17 (41%), Positives = 12/17 (70%)
 Frame = +1

Query: 16  KYVSLM*MKYFLWFFQI 66
           KYV+++  + FLW F +
Sbjct: 540 KYVAMVLDRIFLWIFTV 556


>AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase
           protein.
          Length = 693

 Score = 21.4 bits (43), Expect = 9.4
 Identities = 10/26 (38%), Positives = 15/26 (57%)
 Frame = +1

Query: 364 RGKNIYIIQTGTKDVNNNIMELLIMA 441
           RG+ I + +    DV  NIME  I++
Sbjct: 330 RGERIQLTEKNGIDVLGNIMEASILS 355


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 228,506
Number of Sequences: 438
Number of extensions: 5198
Number of successful extensions: 10
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 23789892
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)