Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0371
         (832 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014298-979|AAF46221.2| 1027|Drosophila melanogaster CG14431-PA...    34   0.27 
BT023501-1|AAY84901.1|  919|Drosophila melanogaster LD27033p pro...    29   7.8  
BT021209-1|AAX33357.1|  766|Drosophila melanogaster SD09342p pro...    29   7.8  
AE014296-1769|AAN11939.1|  919|Drosophila melanogaster CG8108-PB...    29   7.8  
AE014296-1768|AAF50193.1|  919|Drosophila melanogaster CG8108-PA...    29   7.8  

>AE014298-979|AAF46221.2| 1027|Drosophila melanogaster CG14431-PA
           protein.
          Length = 1027

 Score = 33.9 bits (74), Expect = 0.27
 Identities = 20/66 (30%), Positives = 36/66 (54%)
 Frame = +3

Query: 321 RKSQDKHTENLIPNLTNSHKSYGYTGIDKDESIVSQDKVAFTNDNGNLYQSKESRSENSG 500
           +K  ++  +  +  L  ++ +   TG D+DES+++++K  F N    L +   S S  SG
Sbjct: 159 KKLSNQQNKQGVRRLPAAYTTTSTTGNDEDESVIAKNKAKFPNALQRL-KLFGSSSRESG 217

Query: 501 TSTRIL 518
           T+ RIL
Sbjct: 218 TTRRIL 223


>BT023501-1|AAY84901.1|  919|Drosophila melanogaster LD27033p
           protein.
          Length = 919

 Score = 29.1 bits (62), Expect = 7.8
 Identities = 25/87 (28%), Positives = 34/87 (39%), Gaps = 1/87 (1%)
 Frame = +3

Query: 255 NVENPSQRPEHRDPQDYTALNERKSQDKHTENLIPNLTNSHK-SYGYTGIDKDESIVSQD 431
           N  N S     R   +Y   N R   + H  N   N  N+H  S G  G +      S+D
Sbjct: 21  NNRNSSNYVNTRTQGNYRPNNGRYENNYHNNN---NRYNNHNNSGGGAGGNSHYDNRSRD 77

Query: 432 KVAFTNDNGNLYQSKESRSENSGTSTR 512
           K    N +   Y+S  S  + S  S+R
Sbjct: 78  KFTHHNSSSGRYESSSSSHKRSYDSSR 104


>BT021209-1|AAX33357.1|  766|Drosophila melanogaster SD09342p
           protein.
          Length = 766

 Score = 29.1 bits (62), Expect = 7.8
 Identities = 22/85 (25%), Positives = 43/85 (50%), Gaps = 6/85 (7%)
 Frame = +3

Query: 261 ENPSQR-PEHRD-PQDYTALNERKSQDKH--TENLIPNLTNSHKSYGYTGIDKDESI--V 422
           +NP++R PE  D  +    L E + Q+ H  ++  +  L    K    + +++  ++  V
Sbjct: 292 KNPAKRNPERWDFYKALKGLQESREQEYHCISKESVLTLETQLKKSPSSSLNRIHNLSDV 351

Query: 423 SQDKVAFTNDNGNLYQSKESRSENS 497
             D V   N NG ++  ++++SENS
Sbjct: 352 GDDLVEIKNANGKVFYVEDNKSENS 376


>AE014296-1769|AAN11939.1|  919|Drosophila melanogaster CG8108-PB,
           isoform B protein.
          Length = 919

 Score = 29.1 bits (62), Expect = 7.8
 Identities = 25/87 (28%), Positives = 34/87 (39%), Gaps = 1/87 (1%)
 Frame = +3

Query: 255 NVENPSQRPEHRDPQDYTALNERKSQDKHTENLIPNLTNSHK-SYGYTGIDKDESIVSQD 431
           N  N S     R   +Y   N R   + H  N   N  N+H  S G  G +      S+D
Sbjct: 21  NNRNSSNYVNTRTQGNYRPNNGRYENNYHNNN---NRYNNHNNSGGGAGGNSHYDNRSRD 77

Query: 432 KVAFTNDNGNLYQSKESRSENSGTSTR 512
           K    N +   Y+S  S  + S  S+R
Sbjct: 78  KFTHHNSSSGRYESSSSSHKRSYDSSR 104


>AE014296-1768|AAF50193.1|  919|Drosophila melanogaster CG8108-PA,
           isoform A protein.
          Length = 919

 Score = 29.1 bits (62), Expect = 7.8
 Identities = 25/87 (28%), Positives = 34/87 (39%), Gaps = 1/87 (1%)
 Frame = +3

Query: 255 NVENPSQRPEHRDPQDYTALNERKSQDKHTENLIPNLTNSHK-SYGYTGIDKDESIVSQD 431
           N  N S     R   +Y   N R   + H  N   N  N+H  S G  G +      S+D
Sbjct: 21  NNRNSSNYVNTRTQGNYRPNNGRYENNYHNNN---NRYNNHNNSGGGAGGNSHYDNRSRD 77

Query: 432 KVAFTNDNGNLYQSKESRSENSGTSTR 512
           K    N +   Y+S  S  + S  S+R
Sbjct: 78  KFTHHNSSSGRYESSSSSHKRSYDSSR 104


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 33,651,810
Number of Sequences: 53049
Number of extensions: 669036
Number of successful extensions: 2154
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 2031
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2154
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3942192384
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)