Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0371
         (832 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC006607-1|AAY44022.1|  208|Caenorhabditis elegans Hypothetical ...    31   0.77 
AF026212-3|AAF99974.2| 1172|Caenorhabditis elegans Hypothetical ...    31   1.0  
AL132876-20|CAD92404.1| 1127|Caenorhabditis elegans Hypothetical...    31   1.3  
AL132876-19|CAD21673.1| 1161|Caenorhabditis elegans Hypothetical...    31   1.3  
U00045-3|AAL02502.1|  868|Caenorhabditis elegans Temporarily ass...    29   3.1  
U00045-2|AAL02501.1| 1004|Caenorhabditis elegans Temporarily ass...    29   3.1  
U00045-1|AAM29684.1| 1099|Caenorhabditis elegans Temporarily ass...    29   3.1  
Z81017-11|CAC70095.2| 1158|Caenorhabditis elegans Hypothetical p...    29   4.1  
Z81017-10|CAE47468.1| 1051|Caenorhabditis elegans Hypothetical p...    29   4.1  
Z81017-9|CAD44136.1| 1096|Caenorhabditis elegans Hypothetical pr...    29   4.1  
Z81017-8|CAC70094.2|  988|Caenorhabditis elegans Hypothetical pr...    29   4.1  
Z81017-7|CAB02673.2| 1040|Caenorhabditis elegans Hypothetical pr...    29   4.1  
Z48621-2|CAA88547.1|  536|Caenorhabditis elegans Hypothetical pr...    29   4.1  
U39761-1|AAC46934.1| 1040|Caenorhabditis elegans EGL-15 protein.       29   4.1  
U02289-1|AAA18934.1| 1439|Caenorhabditis elegans GTPase-activati...    29   4.1  
L16687-1|AAK71357.2| 1317|Caenorhabditis elegans Hypothetical pr...    29   4.1  
AY288941-1|AAP44084.1|  987|Caenorhabditis elegans EGL-15 protein.     29   4.1  
Z48809-7|CAA88744.1|  367|Caenorhabditis elegans Hypothetical pr...    28   7.1  
AF358857-1|AAK52772.1|  367|Caenorhabditis elegans REF-1 protein.      28   7.1  

>AC006607-1|AAY44022.1|  208|Caenorhabditis elegans Hypothetical
           protein C09E7.10 protein.
          Length = 208

 Score = 31.5 bits (68), Expect = 0.77
 Identities = 19/65 (29%), Positives = 29/65 (44%), Gaps = 4/65 (6%)
 Frame = +3

Query: 252 SNVENPSQRPEHR--DPQDYTALNERKSQDKHTENLI--PNLTNSHKSYGYTGIDKDESI 419
           +NV    ++P+ +  DP  +  L E   +D H   +I   + +  H  YG T  DKD   
Sbjct: 66  NNVTLEKEKPKQKLIDPSTFITLKENDWRDAHEGRMIIWSHESQHHPDYGKTFTDKDRYT 125

Query: 420 VSQDK 434
             Q K
Sbjct: 126 YRQSK 130


>AF026212-3|AAF99974.2| 1172|Caenorhabditis elegans Hypothetical
           protein F52G3.1 protein.
          Length = 1172

 Score = 31.1 bits (67), Expect = 1.0
 Identities = 18/79 (22%), Positives = 38/79 (48%), Gaps = 3/79 (3%)
 Frame = +3

Query: 252 SNVENPSQRPEHRDPQDYTALNERKSQD--KHTENLIPN-LTNSHKSYGYTGIDKDESIV 422
           S ++N +Q       QD+   ++ K +D  + T   +P  L          G+   +S+ 
Sbjct: 649 SQLQNHTQNQSQNQSQDHEKNSKTKPKDPKQGTRLFVPKALRKEADDLPANGLLSPQSVE 708

Query: 423 SQDKVAFTNDNGNLYQSKE 479
           +++K+A    NG++++S E
Sbjct: 709 TKEKIAAAKSNGDVFKSDE 727


>AL132876-20|CAD92404.1| 1127|Caenorhabditis elegans Hypothetical
           protein Y105E8A.24b protein.
          Length = 1127

 Score = 30.7 bits (66), Expect = 1.3
 Identities = 20/86 (23%), Positives = 42/86 (48%)
 Frame = +3

Query: 273 QRPEHRDPQDYTALNERKSQDKHTENLIPNLTNSHKSYGYTGIDKDESIVSQDKVAFTND 452
           Q+  HR     T+     + D +T  ++P  T+S      TG+ ++   ++ +  + +N 
Sbjct: 18  QQQRHRRQSSGTSGGGASNLDANTLKVLPTTTSSQSICCDTGVAEN---LNLNLNSISNH 74

Query: 453 NGNLYQSKESRSENSGTSTRILCPKL 530
           N ++ +SK + S +  TS R+  P +
Sbjct: 75  NSSIPKSKSNNSVSGITSRRVSFPNI 100


>AL132876-19|CAD21673.1| 1161|Caenorhabditis elegans Hypothetical
           protein Y105E8A.24a protein.
          Length = 1161

 Score = 30.7 bits (66), Expect = 1.3
 Identities = 20/86 (23%), Positives = 42/86 (48%)
 Frame = +3

Query: 273 QRPEHRDPQDYTALNERKSQDKHTENLIPNLTNSHKSYGYTGIDKDESIVSQDKVAFTND 452
           Q+  HR     T+     + D +T  ++P  T+S      TG+ ++   ++ +  + +N 
Sbjct: 18  QQQRHRRQSSGTSGGGASNLDANTLKVLPTTTSSQSICCDTGVAEN---LNLNLNSISNH 74

Query: 453 NGNLYQSKESRSENSGTSTRILCPKL 530
           N ++ +SK + S +  TS R+  P +
Sbjct: 75  NSSIPKSKSNNSVSGITSRRVSFPNI 100


>U00045-3|AAL02502.1|  868|Caenorhabditis elegans Temporarily
           assigned gene nameprotein 204, isoform b protein.
          Length = 868

 Score = 29.5 bits (63), Expect = 3.1
 Identities = 13/57 (22%), Positives = 27/57 (47%)
 Frame = +3

Query: 267 PSQRPEHRDPQDYTALNERKSQDKHTENLIPNLTNSHKSYGYTGIDKDESIVSQDKV 437
           P Q   ++  + Y+A +  K     T N+I      HK  G++ + +DE ++ +  +
Sbjct: 344 PKQNNGYQRQRRYSASSASKQDGMFTLNVIMGSQPVHKGMGFSTVKRDERVIVESVI 400


>U00045-2|AAL02501.1| 1004|Caenorhabditis elegans Temporarily
           assigned gene nameprotein 204, isoform a protein.
          Length = 1004

 Score = 29.5 bits (63), Expect = 3.1
 Identities = 13/57 (22%), Positives = 27/57 (47%)
 Frame = +3

Query: 267 PSQRPEHRDPQDYTALNERKSQDKHTENLIPNLTNSHKSYGYTGIDKDESIVSQDKV 437
           P Q   ++  + Y+A +  K     T N+I      HK  G++ + +DE ++ +  +
Sbjct: 299 PKQNNGYQRQRRYSASSASKQDGMFTLNVIMGSQPVHKGMGFSTVKRDERVIVESVI 355


>U00045-1|AAM29684.1| 1099|Caenorhabditis elegans Temporarily
           assigned gene nameprotein 204, isoform c protein.
          Length = 1099

 Score = 29.5 bits (63), Expect = 3.1
 Identities = 13/57 (22%), Positives = 27/57 (47%)
 Frame = +3

Query: 267 PSQRPEHRDPQDYTALNERKSQDKHTENLIPNLTNSHKSYGYTGIDKDESIVSQDKV 437
           P Q   ++  + Y+A +  K     T N+I      HK  G++ + +DE ++ +  +
Sbjct: 394 PKQNNGYQRQRRYSASSASKQDGMFTLNVIMGSQPVHKGMGFSTVKRDERVIVESVI 450


>Z81017-11|CAC70095.2| 1158|Caenorhabditis elegans Hypothetical
           protein F58A3.2c protein.
          Length = 1158

 Score = 29.1 bits (62), Expect = 4.1
 Identities = 15/38 (39%), Positives = 19/38 (50%), Gaps = 1/38 (2%)
 Frame = +3

Query: 267 PSQRPEHRDPQDYTA-LNERKSQDKHTENLIPNLTNSH 377
           P +    +  Q+ T  L  RK+ DK    LIPNLT  H
Sbjct: 736 PKEEKAKKSSQELTDYLEPRKASDKDDIELIPNLTQRH 773


>Z81017-10|CAE47468.1| 1051|Caenorhabditis elegans Hypothetical
           protein F58A3.2e protein.
          Length = 1051

 Score = 29.1 bits (62), Expect = 4.1
 Identities = 15/38 (39%), Positives = 19/38 (50%), Gaps = 1/38 (2%)
 Frame = +3

Query: 267 PSQRPEHRDPQDYTA-LNERKSQDKHTENLIPNLTNSH 377
           P +    +  Q+ T  L  RK+ DK    LIPNLT  H
Sbjct: 736 PKEEKAKKSSQELTDYLEPRKASDKDDIELIPNLTQRH 773


>Z81017-9|CAD44136.1| 1096|Caenorhabditis elegans Hypothetical
           protein F58A3.2d protein.
          Length = 1096

 Score = 29.1 bits (62), Expect = 4.1
 Identities = 15/38 (39%), Positives = 19/38 (50%), Gaps = 1/38 (2%)
 Frame = +3

Query: 267 PSQRPEHRDPQDYTA-LNERKSQDKHTENLIPNLTNSH 377
           P +    +  Q+ T  L  RK+ DK    LIPNLT  H
Sbjct: 736 PKEEKAKKSSQELTDYLEPRKASDKDDIELIPNLTQRH 773


>Z81017-8|CAC70094.2|  988|Caenorhabditis elegans Hypothetical
           protein F58A3.2b protein.
          Length = 988

 Score = 29.1 bits (62), Expect = 4.1
 Identities = 15/38 (39%), Positives = 19/38 (50%), Gaps = 1/38 (2%)
 Frame = +3

Query: 267 PSQRPEHRDPQDYTA-LNERKSQDKHTENLIPNLTNSH 377
           P +    +  Q+ T  L  RK+ DK    LIPNLT  H
Sbjct: 684 PKEEKAKKSSQELTDYLEPRKASDKDDIELIPNLTQRH 721


>Z81017-7|CAB02673.2| 1040|Caenorhabditis elegans Hypothetical
           protein F58A3.2a protein.
          Length = 1040

 Score = 29.1 bits (62), Expect = 4.1
 Identities = 15/38 (39%), Positives = 19/38 (50%), Gaps = 1/38 (2%)
 Frame = +3

Query: 267 PSQRPEHRDPQDYTA-LNERKSQDKHTENLIPNLTNSH 377
           P +    +  Q+ T  L  RK+ DK    LIPNLT  H
Sbjct: 736 PKEEKAKKSSQELTDYLEPRKASDKDDIELIPNLTQRH 773


>Z48621-2|CAA88547.1|  536|Caenorhabditis elegans Hypothetical
           protein R07B1.3 protein.
          Length = 536

 Score = 29.1 bits (62), Expect = 4.1
 Identities = 17/68 (25%), Positives = 30/68 (44%), Gaps = 1/68 (1%)
 Frame = +3

Query: 249 PSNVENPSQRPEHRDPQDYTAL-NERKSQDKHTENLIPNLTNSHKSYGYTGIDKDESIVS 425
           P  V+    +PE  +   Y  L +E+K   + + +       ++K Y Y+ +D D     
Sbjct: 77  PDEVKYLGAKPELIEVGGYAFLESEQKKYYEFSSDKTKMFYQNYKQYHYSEVDNDAGYNY 136

Query: 426 QDKVAFTN 449
            DK+ F N
Sbjct: 137 NDKIMFPN 144


>U39761-1|AAC46934.1| 1040|Caenorhabditis elegans EGL-15 protein.
          Length = 1040

 Score = 29.1 bits (62), Expect = 4.1
 Identities = 15/38 (39%), Positives = 19/38 (50%), Gaps = 1/38 (2%)
 Frame = +3

Query: 267 PSQRPEHRDPQDYTA-LNERKSQDKHTENLIPNLTNSH 377
           P +    +  Q+ T  L  RK+ DK    LIPNLT  H
Sbjct: 736 PKEEKAKKSSQELTDYLEPRKASDKDDIELIPNLTQRH 773


>U02289-1|AAA18934.1| 1439|Caenorhabditis elegans GTPase-activating
           protein protein.
          Length = 1439

 Score = 29.1 bits (62), Expect = 4.1
 Identities = 20/87 (22%), Positives = 40/87 (45%), Gaps = 4/87 (4%)
 Frame = +3

Query: 261 ENPSQRPEHRDPQDYTALNERKSQDKHTENLIPNLTNSHKSYGYTGIDKDESIVSQDKVA 440
           E+PS+   H DP++   ++E  +  + + N   +L N   S    G+D ++  +   +V 
Sbjct: 159 EDPSEDTGHDDPEETQEISE--TPIRRSRNRNASLRNRQSSRSLGGLDFEKLRMGTARVG 216

Query: 441 FTN----DNGNLYQSKESRSENSGTST 509
            +N    +NG    S    S + G ++
Sbjct: 217 DSNEATAENGTSSSSSRKNSRDDGLTS 243


>L16687-1|AAK71357.2| 1317|Caenorhabditis elegans Hypothetical
           protein C04D8.1 protein.
          Length = 1317

 Score = 29.1 bits (62), Expect = 4.1
 Identities = 20/87 (22%), Positives = 40/87 (45%), Gaps = 4/87 (4%)
 Frame = +3

Query: 261 ENPSQRPEHRDPQDYTALNERKSQDKHTENLIPNLTNSHKSYGYTGIDKDESIVSQDKVA 440
           E+PS+   H DP++   ++E  +  + + N   +L N   S    G+D ++  +   +V 
Sbjct: 37  EDPSEDTGHDDPEETQEISE--TPIRRSRNRNASLRNRQSSRSLGGLDFEKLRMGTARVG 94

Query: 441 FTN----DNGNLYQSKESRSENSGTST 509
            +N    +NG    S    S + G ++
Sbjct: 95  DSNEATAENGTSSSSSRKNSRDDGLTS 121


>AY288941-1|AAP44084.1|  987|Caenorhabditis elegans EGL-15 protein.
          Length = 987

 Score = 29.1 bits (62), Expect = 4.1
 Identities = 15/38 (39%), Positives = 19/38 (50%), Gaps = 1/38 (2%)
 Frame = +3

Query: 267 PSQRPEHRDPQDYTA-LNERKSQDKHTENLIPNLTNSH 377
           P +    +  Q+ T  L  RK+ DK    LIPNLT  H
Sbjct: 683 PKEEKAKKSSQELTDYLEPRKASDKDDIELIPNLTQRH 720


>Z48809-7|CAA88744.1|  367|Caenorhabditis elegans Hypothetical
           protein T01E8.2 protein.
          Length = 367

 Score = 28.3 bits (60), Expect = 7.1
 Identities = 10/21 (47%), Positives = 18/21 (85%)
 Frame = +1

Query: 586 QRRLHNYVSRSNKQRSLYYYS 648
           Q + HN+VSRS++++SLY ++
Sbjct: 217 QNKKHNFVSRSDQEQSLYAHA 237


>AF358857-1|AAK52772.1|  367|Caenorhabditis elegans REF-1 protein.
          Length = 367

 Score = 28.3 bits (60), Expect = 7.1
 Identities = 10/21 (47%), Positives = 18/21 (85%)
 Frame = +1

Query: 586 QRRLHNYVSRSNKQRSLYYYS 648
           Q + HN+VSRS++++SLY ++
Sbjct: 217 QNKKHNFVSRSDQEQSLYAHA 237


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,636,751
Number of Sequences: 27780
Number of extensions: 355357
Number of successful extensions: 911
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 880
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 909
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 2061488408
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)