BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= e40h0371 (832 letters) Database: celegans 27,780 sequences; 12,740,198 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value AC006607-1|AAY44022.1| 208|Caenorhabditis elegans Hypothetical ... 31 0.77 AF026212-3|AAF99974.2| 1172|Caenorhabditis elegans Hypothetical ... 31 1.0 AL132876-20|CAD92404.1| 1127|Caenorhabditis elegans Hypothetical... 31 1.3 AL132876-19|CAD21673.1| 1161|Caenorhabditis elegans Hypothetical... 31 1.3 U00045-3|AAL02502.1| 868|Caenorhabditis elegans Temporarily ass... 29 3.1 U00045-2|AAL02501.1| 1004|Caenorhabditis elegans Temporarily ass... 29 3.1 U00045-1|AAM29684.1| 1099|Caenorhabditis elegans Temporarily ass... 29 3.1 Z81017-11|CAC70095.2| 1158|Caenorhabditis elegans Hypothetical p... 29 4.1 Z81017-10|CAE47468.1| 1051|Caenorhabditis elegans Hypothetical p... 29 4.1 Z81017-9|CAD44136.1| 1096|Caenorhabditis elegans Hypothetical pr... 29 4.1 Z81017-8|CAC70094.2| 988|Caenorhabditis elegans Hypothetical pr... 29 4.1 Z81017-7|CAB02673.2| 1040|Caenorhabditis elegans Hypothetical pr... 29 4.1 Z48621-2|CAA88547.1| 536|Caenorhabditis elegans Hypothetical pr... 29 4.1 U39761-1|AAC46934.1| 1040|Caenorhabditis elegans EGL-15 protein. 29 4.1 U02289-1|AAA18934.1| 1439|Caenorhabditis elegans GTPase-activati... 29 4.1 L16687-1|AAK71357.2| 1317|Caenorhabditis elegans Hypothetical pr... 29 4.1 AY288941-1|AAP44084.1| 987|Caenorhabditis elegans EGL-15 protein. 29 4.1 Z48809-7|CAA88744.1| 367|Caenorhabditis elegans Hypothetical pr... 28 7.1 AF358857-1|AAK52772.1| 367|Caenorhabditis elegans REF-1 protein. 28 7.1 >AC006607-1|AAY44022.1| 208|Caenorhabditis elegans Hypothetical protein C09E7.10 protein. Length = 208 Score = 31.5 bits (68), Expect = 0.77 Identities = 19/65 (29%), Positives = 29/65 (44%), Gaps = 4/65 (6%) Frame = +3 Query: 252 SNVENPSQRPEHR--DPQDYTALNERKSQDKHTENLI--PNLTNSHKSYGYTGIDKDESI 419 +NV ++P+ + DP + L E +D H +I + + H YG T DKD Sbjct: 66 NNVTLEKEKPKQKLIDPSTFITLKENDWRDAHEGRMIIWSHESQHHPDYGKTFTDKDRYT 125 Query: 420 VSQDK 434 Q K Sbjct: 126 YRQSK 130 >AF026212-3|AAF99974.2| 1172|Caenorhabditis elegans Hypothetical protein F52G3.1 protein. Length = 1172 Score = 31.1 bits (67), Expect = 1.0 Identities = 18/79 (22%), Positives = 38/79 (48%), Gaps = 3/79 (3%) Frame = +3 Query: 252 SNVENPSQRPEHRDPQDYTALNERKSQD--KHTENLIPN-LTNSHKSYGYTGIDKDESIV 422 S ++N +Q QD+ ++ K +D + T +P L G+ +S+ Sbjct: 649 SQLQNHTQNQSQNQSQDHEKNSKTKPKDPKQGTRLFVPKALRKEADDLPANGLLSPQSVE 708 Query: 423 SQDKVAFTNDNGNLYQSKE 479 +++K+A NG++++S E Sbjct: 709 TKEKIAAAKSNGDVFKSDE 727 >AL132876-20|CAD92404.1| 1127|Caenorhabditis elegans Hypothetical protein Y105E8A.24b protein. Length = 1127 Score = 30.7 bits (66), Expect = 1.3 Identities = 20/86 (23%), Positives = 42/86 (48%) Frame = +3 Query: 273 QRPEHRDPQDYTALNERKSQDKHTENLIPNLTNSHKSYGYTGIDKDESIVSQDKVAFTND 452 Q+ HR T+ + D +T ++P T+S TG+ ++ ++ + + +N Sbjct: 18 QQQRHRRQSSGTSGGGASNLDANTLKVLPTTTSSQSICCDTGVAEN---LNLNLNSISNH 74 Query: 453 NGNLYQSKESRSENSGTSTRILCPKL 530 N ++ +SK + S + TS R+ P + Sbjct: 75 NSSIPKSKSNNSVSGITSRRVSFPNI 100 >AL132876-19|CAD21673.1| 1161|Caenorhabditis elegans Hypothetical protein Y105E8A.24a protein. Length = 1161 Score = 30.7 bits (66), Expect = 1.3 Identities = 20/86 (23%), Positives = 42/86 (48%) Frame = +3 Query: 273 QRPEHRDPQDYTALNERKSQDKHTENLIPNLTNSHKSYGYTGIDKDESIVSQDKVAFTND 452 Q+ HR T+ + D +T ++P T+S TG+ ++ ++ + + +N Sbjct: 18 QQQRHRRQSSGTSGGGASNLDANTLKVLPTTTSSQSICCDTGVAEN---LNLNLNSISNH 74 Query: 453 NGNLYQSKESRSENSGTSTRILCPKL 530 N ++ +SK + S + TS R+ P + Sbjct: 75 NSSIPKSKSNNSVSGITSRRVSFPNI 100 >U00045-3|AAL02502.1| 868|Caenorhabditis elegans Temporarily assigned gene nameprotein 204, isoform b protein. Length = 868 Score = 29.5 bits (63), Expect = 3.1 Identities = 13/57 (22%), Positives = 27/57 (47%) Frame = +3 Query: 267 PSQRPEHRDPQDYTALNERKSQDKHTENLIPNLTNSHKSYGYTGIDKDESIVSQDKV 437 P Q ++ + Y+A + K T N+I HK G++ + +DE ++ + + Sbjct: 344 PKQNNGYQRQRRYSASSASKQDGMFTLNVIMGSQPVHKGMGFSTVKRDERVIVESVI 400 >U00045-2|AAL02501.1| 1004|Caenorhabditis elegans Temporarily assigned gene nameprotein 204, isoform a protein. Length = 1004 Score = 29.5 bits (63), Expect = 3.1 Identities = 13/57 (22%), Positives = 27/57 (47%) Frame = +3 Query: 267 PSQRPEHRDPQDYTALNERKSQDKHTENLIPNLTNSHKSYGYTGIDKDESIVSQDKV 437 P Q ++ + Y+A + K T N+I HK G++ + +DE ++ + + Sbjct: 299 PKQNNGYQRQRRYSASSASKQDGMFTLNVIMGSQPVHKGMGFSTVKRDERVIVESVI 355 >U00045-1|AAM29684.1| 1099|Caenorhabditis elegans Temporarily assigned gene nameprotein 204, isoform c protein. Length = 1099 Score = 29.5 bits (63), Expect = 3.1 Identities = 13/57 (22%), Positives = 27/57 (47%) Frame = +3 Query: 267 PSQRPEHRDPQDYTALNERKSQDKHTENLIPNLTNSHKSYGYTGIDKDESIVSQDKV 437 P Q ++ + Y+A + K T N+I HK G++ + +DE ++ + + Sbjct: 394 PKQNNGYQRQRRYSASSASKQDGMFTLNVIMGSQPVHKGMGFSTVKRDERVIVESVI 450 >Z81017-11|CAC70095.2| 1158|Caenorhabditis elegans Hypothetical protein F58A3.2c protein. Length = 1158 Score = 29.1 bits (62), Expect = 4.1 Identities = 15/38 (39%), Positives = 19/38 (50%), Gaps = 1/38 (2%) Frame = +3 Query: 267 PSQRPEHRDPQDYTA-LNERKSQDKHTENLIPNLTNSH 377 P + + Q+ T L RK+ DK LIPNLT H Sbjct: 736 PKEEKAKKSSQELTDYLEPRKASDKDDIELIPNLTQRH 773 >Z81017-10|CAE47468.1| 1051|Caenorhabditis elegans Hypothetical protein F58A3.2e protein. Length = 1051 Score = 29.1 bits (62), Expect = 4.1 Identities = 15/38 (39%), Positives = 19/38 (50%), Gaps = 1/38 (2%) Frame = +3 Query: 267 PSQRPEHRDPQDYTA-LNERKSQDKHTENLIPNLTNSH 377 P + + Q+ T L RK+ DK LIPNLT H Sbjct: 736 PKEEKAKKSSQELTDYLEPRKASDKDDIELIPNLTQRH 773 >Z81017-9|CAD44136.1| 1096|Caenorhabditis elegans Hypothetical protein F58A3.2d protein. Length = 1096 Score = 29.1 bits (62), Expect = 4.1 Identities = 15/38 (39%), Positives = 19/38 (50%), Gaps = 1/38 (2%) Frame = +3 Query: 267 PSQRPEHRDPQDYTA-LNERKSQDKHTENLIPNLTNSH 377 P + + Q+ T L RK+ DK LIPNLT H Sbjct: 736 PKEEKAKKSSQELTDYLEPRKASDKDDIELIPNLTQRH 773 >Z81017-8|CAC70094.2| 988|Caenorhabditis elegans Hypothetical protein F58A3.2b protein. Length = 988 Score = 29.1 bits (62), Expect = 4.1 Identities = 15/38 (39%), Positives = 19/38 (50%), Gaps = 1/38 (2%) Frame = +3 Query: 267 PSQRPEHRDPQDYTA-LNERKSQDKHTENLIPNLTNSH 377 P + + Q+ T L RK+ DK LIPNLT H Sbjct: 684 PKEEKAKKSSQELTDYLEPRKASDKDDIELIPNLTQRH 721 >Z81017-7|CAB02673.2| 1040|Caenorhabditis elegans Hypothetical protein F58A3.2a protein. Length = 1040 Score = 29.1 bits (62), Expect = 4.1 Identities = 15/38 (39%), Positives = 19/38 (50%), Gaps = 1/38 (2%) Frame = +3 Query: 267 PSQRPEHRDPQDYTA-LNERKSQDKHTENLIPNLTNSH 377 P + + Q+ T L RK+ DK LIPNLT H Sbjct: 736 PKEEKAKKSSQELTDYLEPRKASDKDDIELIPNLTQRH 773 >Z48621-2|CAA88547.1| 536|Caenorhabditis elegans Hypothetical protein R07B1.3 protein. Length = 536 Score = 29.1 bits (62), Expect = 4.1 Identities = 17/68 (25%), Positives = 30/68 (44%), Gaps = 1/68 (1%) Frame = +3 Query: 249 PSNVENPSQRPEHRDPQDYTAL-NERKSQDKHTENLIPNLTNSHKSYGYTGIDKDESIVS 425 P V+ +PE + Y L +E+K + + + ++K Y Y+ +D D Sbjct: 77 PDEVKYLGAKPELIEVGGYAFLESEQKKYYEFSSDKTKMFYQNYKQYHYSEVDNDAGYNY 136 Query: 426 QDKVAFTN 449 DK+ F N Sbjct: 137 NDKIMFPN 144 >U39761-1|AAC46934.1| 1040|Caenorhabditis elegans EGL-15 protein. Length = 1040 Score = 29.1 bits (62), Expect = 4.1 Identities = 15/38 (39%), Positives = 19/38 (50%), Gaps = 1/38 (2%) Frame = +3 Query: 267 PSQRPEHRDPQDYTA-LNERKSQDKHTENLIPNLTNSH 377 P + + Q+ T L RK+ DK LIPNLT H Sbjct: 736 PKEEKAKKSSQELTDYLEPRKASDKDDIELIPNLTQRH 773 >U02289-1|AAA18934.1| 1439|Caenorhabditis elegans GTPase-activating protein protein. Length = 1439 Score = 29.1 bits (62), Expect = 4.1 Identities = 20/87 (22%), Positives = 40/87 (45%), Gaps = 4/87 (4%) Frame = +3 Query: 261 ENPSQRPEHRDPQDYTALNERKSQDKHTENLIPNLTNSHKSYGYTGIDKDESIVSQDKVA 440 E+PS+ H DP++ ++E + + + N +L N S G+D ++ + +V Sbjct: 159 EDPSEDTGHDDPEETQEISE--TPIRRSRNRNASLRNRQSSRSLGGLDFEKLRMGTARVG 216 Query: 441 FTN----DNGNLYQSKESRSENSGTST 509 +N +NG S S + G ++ Sbjct: 217 DSNEATAENGTSSSSSRKNSRDDGLTS 243 >L16687-1|AAK71357.2| 1317|Caenorhabditis elegans Hypothetical protein C04D8.1 protein. Length = 1317 Score = 29.1 bits (62), Expect = 4.1 Identities = 20/87 (22%), Positives = 40/87 (45%), Gaps = 4/87 (4%) Frame = +3 Query: 261 ENPSQRPEHRDPQDYTALNERKSQDKHTENLIPNLTNSHKSYGYTGIDKDESIVSQDKVA 440 E+PS+ H DP++ ++E + + + N +L N S G+D ++ + +V Sbjct: 37 EDPSEDTGHDDPEETQEISE--TPIRRSRNRNASLRNRQSSRSLGGLDFEKLRMGTARVG 94 Query: 441 FTN----DNGNLYQSKESRSENSGTST 509 +N +NG S S + G ++ Sbjct: 95 DSNEATAENGTSSSSSRKNSRDDGLTS 121 >AY288941-1|AAP44084.1| 987|Caenorhabditis elegans EGL-15 protein. Length = 987 Score = 29.1 bits (62), Expect = 4.1 Identities = 15/38 (39%), Positives = 19/38 (50%), Gaps = 1/38 (2%) Frame = +3 Query: 267 PSQRPEHRDPQDYTA-LNERKSQDKHTENLIPNLTNSH 377 P + + Q+ T L RK+ DK LIPNLT H Sbjct: 683 PKEEKAKKSSQELTDYLEPRKASDKDDIELIPNLTQRH 720 >Z48809-7|CAA88744.1| 367|Caenorhabditis elegans Hypothetical protein T01E8.2 protein. Length = 367 Score = 28.3 bits (60), Expect = 7.1 Identities = 10/21 (47%), Positives = 18/21 (85%) Frame = +1 Query: 586 QRRLHNYVSRSNKQRSLYYYS 648 Q + HN+VSRS++++SLY ++ Sbjct: 217 QNKKHNFVSRSDQEQSLYAHA 237 >AF358857-1|AAK52772.1| 367|Caenorhabditis elegans REF-1 protein. Length = 367 Score = 28.3 bits (60), Expect = 7.1 Identities = 10/21 (47%), Positives = 18/21 (85%) Frame = +1 Query: 586 QRRLHNYVSRSNKQRSLYYYS 648 Q + HN+VSRS++++SLY ++ Sbjct: 217 QNKKHNFVSRSDQEQSLYAHA 237 Database: celegans Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 12,740,198 Number of sequences in database: 27,780 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 17,636,751 Number of Sequences: 27780 Number of extensions: 355357 Number of successful extensions: 911 Number of sequences better than 10.0: 19 Number of HSP's better than 10.0 without gapping: 880 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 909 length of database: 12,740,198 effective HSP length: 80 effective length of database: 10,517,798 effective search space used: 2061488408 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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