Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0370
         (711 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

12_02_1092 - 26011445-26012071,26012826-26014022,26014083-260142...    32   0.52 
12_02_0454 + 19199063-19200757,19202201-19202287                       30   1.6  
11_06_0072 + 19813912-19815234,19815314-19815661,19816002-19816229     30   1.6  
07_03_1237 + 25073010-25073513                                         30   1.6  
12_01_0576 + 4705912-4706220,4706319-4706393,4707398-4707477,470...    30   2.1  
12_02_1047 + 25666113-25666442,25666606-25666651,25667042-256671...    29   4.8  
05_06_0032 - 25067996-25068156,25068746-25068815,25069385-250695...    28   6.4  

>12_02_1092 -
           26011445-26012071,26012826-26014022,26014083-26014286,
           26014316-26014385,26014440-26014479,26015566-26015632,
           26015718-26015740,26017985-26018081,26018553-26018614,
           26018913-26019297,26019924-26020007,26020383-26020467,
           26020579-26020790,26020881-26021030
          Length = 1100

 Score = 31.9 bits (69), Expect = 0.52
 Identities = 17/53 (32%), Positives = 24/53 (45%)
 Frame = +2

Query: 221 SCRLHRFQHYTFDEFLYDKDEFEDMTQKKKIQLHYCVDCNSRNIKELIYVSHS 379
           S  LH+         L   + FE+M+  ++ QL +C    SRN  E    SHS
Sbjct: 420 SFHLHKMHEAICTTLLVIMENFEEMSFNEQPQLTFCTPSYSRNFDESYSYSHS 472


>12_02_0454 + 19199063-19200757,19202201-19202287
          Length = 593

 Score = 30.3 bits (65), Expect = 1.6
 Identities = 14/41 (34%), Positives = 24/41 (58%)
 Frame = +2

Query: 266 LYDKDEFEDMTQKKKIQLHYCVDCNSRNIKELIYVSHSMSK 388
           +++ DE E+   K+K +L YCV CN +   +  + +H  SK
Sbjct: 293 VFEDDEEEETRAKRKEEL-YCVACNKKFKSDKQWKNHEQSK 332


>11_06_0072 + 19813912-19815234,19815314-19815661,19816002-19816229
          Length = 632

 Score = 30.3 bits (65), Expect = 1.6
 Identities = 14/46 (30%), Positives = 24/46 (52%)
 Frame = +3

Query: 126 DILRNIGDAIKKKAPFEAVMPSEKISPPTVGDLADCTDSNTIHLMS 263
           D+L    +++ K+  F     SEK+ P T+  L+ C +S  +H  S
Sbjct: 486 DLLHEFAESLSKEDCFRLEDDSEKVIPCTIRHLSVCIESVKLHKQS 531


>07_03_1237 + 25073010-25073513
          Length = 167

 Score = 30.3 bits (65), Expect = 1.6
 Identities = 13/37 (35%), Positives = 21/37 (56%), Gaps = 5/37 (13%)
 Frame = -2

Query: 284 IHPYHIKTHQMY-----SVGICAICKITNCGGAYFFR 189
           +HP H  T ++Y     + G+C +C  T  GG+Y +R
Sbjct: 10  LHPEHSLTRRVYGGKRGAAGVCNVCDRTISGGSYGYR 46


>12_01_0576 +
           4705912-4706220,4706319-4706393,4707398-4707477,
           4707578-4707712,4708131-4708195,4708292-4708419,
           4709108-4709364,4709457-4709982
          Length = 524

 Score = 29.9 bits (64), Expect = 2.1
 Identities = 11/35 (31%), Positives = 20/35 (57%)
 Frame = -2

Query: 314 VFFSFESYLQIHPYHIKTHQMYSVGICAICKITNC 210
           VFF  + ++++H + IKTH  +  G    C + +C
Sbjct: 218 VFFDGKEFIELHAHRIKTHNTHGTG----CTLASC 248


>12_02_1047 +
           25666113-25666442,25666606-25666651,25667042-25667130,
           25667291-25667493,25667807-25667949,25668286-25668332,
           25668794-25668870,25668952-25668981,25669068-25669163,
           25669489-25669591,25669959-25670041,25670204-25670326,
           25670465-25670576,25670791-25670898,25671006-25671593
          Length = 725

 Score = 28.7 bits (61), Expect = 4.8
 Identities = 11/21 (52%), Positives = 14/21 (66%)
 Frame = +2

Query: 104 KIFDEIRRYFKKHWGCHKEKS 166
           KIFD +RRY +  W CH  K+
Sbjct: 450 KIFDTVRRYLEAEW-CHLRKN 469


>05_06_0032 -
           25067996-25068156,25068746-25068815,25069385-25069532,
           25069611-25069726,25069799-25069877,25069960-25070030,
           25070139-25070348,25070445-25070453,25070824-25070968,
           25071297-25071332,25071428-25071494,25071591-25071624
          Length = 381

 Score = 28.3 bits (60), Expect = 6.4
 Identities = 13/26 (50%), Positives = 16/26 (61%)
 Frame = +2

Query: 407 FKVVLPKDLEGKTFIDIGSRLGSVLY 484
           + V L K LEG  F+D GS LGS  +
Sbjct: 301 YTVPLAKHLEGSIFMDCGSDLGSACH 326


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,174,335
Number of Sequences: 37544
Number of extensions: 307734
Number of successful extensions: 797
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 776
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 796
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1839213168
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)