Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0370
         (711 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014135-39|AAF59363.2| 1459|Drosophila melanogaster CG31998-PA ...    32   0.88 
BT003576-1|AAO39580.1| 1309|Drosophila melanogaster LD40262p pro...    29   4.7  
AE013599-1197|AAF58732.2| 1309|Drosophila melanogaster CG30020-P...    29   4.7  

>AE014135-39|AAF59363.2| 1459|Drosophila melanogaster CG31998-PA
            protein.
          Length = 1459

 Score = 31.9 bits (69), Expect = 0.88
 Identities = 16/48 (33%), Positives = 22/48 (45%)
 Frame = -2

Query: 302  FESYLQIHPYHIKTHQMYSVGICAICKITNCGGAYFFRRHHSFKRCFF 159
            F   L  H +  KTH+  S      C  +N GG   F   +SF+R +F
Sbjct: 1170 FNGALDRHVFESKTHERRSSNSANSCSSSNLGGGGRFGSFNSFERGYF 1217


>BT003576-1|AAO39580.1| 1309|Drosophila melanogaster LD40262p
           protein.
          Length = 1309

 Score = 29.5 bits (63), Expect = 4.7
 Identities = 12/35 (34%), Positives = 20/35 (57%)
 Frame = +2

Query: 272 DKDEFEDMTQKKKIQLHYCVDCNSRNIKELIYVSH 376
           D D+F+D  Q K +Q  YC+ CN +   +  + +H
Sbjct: 713 DVDDFDD-EQSKHLQKPYCIYCNKKFTSQYKFENH 746


>AE013599-1197|AAF58732.2| 1309|Drosophila melanogaster CG30020-PA
           protein.
          Length = 1309

 Score = 29.5 bits (63), Expect = 4.7
 Identities = 12/35 (34%), Positives = 20/35 (57%)
 Frame = +2

Query: 272 DKDEFEDMTQKKKIQLHYCVDCNSRNIKELIYVSH 376
           D D+F+D  Q K +Q  YC+ CN +   +  + +H
Sbjct: 713 DVDDFDD-EQSKHLQKPYCIYCNKKFTSQYKFENH 746


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,539,188
Number of Sequences: 53049
Number of extensions: 568422
Number of successful extensions: 1384
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1307
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1376
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3149551053
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)