Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0370
         (711 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF101305-7|AAF98591.1|  279|Caenorhabditis elegans Hypothetical ...    71   8e-13
Z81039-2|CAB02774.1| 2150|Caenorhabditis elegans Hypothetical pr...    29   3.3  
Z79756-9|CAK12562.1|  830|Caenorhabditis elegans Hypothetical pr...    29   3.3  
Z79756-8|CAB02122.1|  891|Caenorhabditis elegans Hypothetical pr...    29   3.3  
Z79756-7|CAK12561.1|  855|Caenorhabditis elegans Hypothetical pr...    29   3.3  
M85149-1|AAA28144.1| 2150|Caenorhabditis elegans zinc finger pro...    29   3.3  
Z68008-5|CAD91696.1| 1160|Caenorhabditis elegans Hypothetical pr...    29   4.3  
Z68008-4|CAA92000.4| 1137|Caenorhabditis elegans Hypothetical pr...    29   4.3  
U41275-1|AAA82464.1|  237|Caenorhabditis elegans Hypothetical pr...    28   5.7  
U00043-1|AAC77509.3|  515|Caenorhabditis elegans Hypothetical pr...    28   5.7  
AF099915-9|AAC68774.1|  108|Caenorhabditis elegans Hypothetical ...    28   7.6  
AF038614-2|AAB92061.2|  321|Caenorhabditis elegans Serpentine re...    28   7.6  

>AF101305-7|AAF98591.1|  279|Caenorhabditis elegans Hypothetical
           protein C04F5.8 protein.
          Length = 279

 Score = 70.9 bits (166), Expect = 8e-13
 Identities = 30/83 (36%), Positives = 55/83 (66%)
 Frame = +2

Query: 257 DEFLYDKDEFEDMTQKKKIQLHYCVDCNSRNIKELIYVSHSMSKSVMMFIFKVVLPKDLE 436
           D FLY+ D+ E++ ++ ++   YC  C+SR+   L ++SHS+S+  + F+F +++P   +
Sbjct: 51  DSFLYEDDDVEELVERDELSRTYCPVCSSRDTVPLNFISHSLSRLQVKFLFDLLMPPTCQ 110

Query: 437 GKTFIDIGSRLGSVLYGAYYLSN 505
               +DIGSRLG+++YGA   +N
Sbjct: 111 --HVLDIGSRLGAIVYGASIFTN 131


>Z81039-2|CAB02774.1| 2150|Caenorhabditis elegans Hypothetical protein
            C25D7.3 protein.
          Length = 2150

 Score = 29.1 bits (62), Expect = 3.3
 Identities = 20/68 (29%), Positives = 32/68 (47%), Gaps = 6/68 (8%)
 Frame = -2

Query: 344  VSCNLHNNAIVFFSFESYLQIH-PYHIKTHQMY--SVGICAIC--KITNCGGAYFFR-RH 183
            V C++ N ++ F S+ S L++H   H   H++       C  C   +T+       R  H
Sbjct: 2081 VQCSIRNQSVYFSSY-SLLELHGKLHQNLHELAPEDADDCQDCYETLTSSFEVIVHRINH 2139

Query: 182  HSFKRCFF 159
            H  +RCFF
Sbjct: 2140 HHSRRCFF 2147


>Z79756-9|CAK12562.1|  830|Caenorhabditis elegans Hypothetical
           protein F53C11.5c protein.
          Length = 830

 Score = 29.1 bits (62), Expect = 3.3
 Identities = 14/36 (38%), Positives = 19/36 (52%)
 Frame = +3

Query: 165 APFEAVMPSEKISPPTVGDLADCTDSNTIHLMSFYM 272
           AP  A MPS+KI PP        + +N+I+ M   M
Sbjct: 48  APSHAPMPSQKILPPPTTSAPSNSGNNSINYMGVQM 83


>Z79756-8|CAB02122.1|  891|Caenorhabditis elegans Hypothetical
           protein F53C11.5b protein.
          Length = 891

 Score = 29.1 bits (62), Expect = 3.3
 Identities = 14/36 (38%), Positives = 19/36 (52%)
 Frame = +3

Query: 165 APFEAVMPSEKISPPTVGDLADCTDSNTIHLMSFYM 272
           AP  A MPS+KI PP        + +N+I+ M   M
Sbjct: 109 APSHAPMPSQKILPPPTTSAPSNSGNNSINYMGVQM 144


>Z79756-7|CAK12561.1|  855|Caenorhabditis elegans Hypothetical
           protein F53C11.5a protein.
          Length = 855

 Score = 29.1 bits (62), Expect = 3.3
 Identities = 14/36 (38%), Positives = 19/36 (52%)
 Frame = +3

Query: 165 APFEAVMPSEKISPPTVGDLADCTDSNTIHLMSFYM 272
           AP  A MPS+KI PP        + +N+I+ M   M
Sbjct: 73  APSHAPMPSQKILPPPTTSAPSNSGNNSINYMGVQM 108


>M85149-1|AAA28144.1| 2150|Caenorhabditis elegans zinc finger protein
            protein.
          Length = 2150

 Score = 29.1 bits (62), Expect = 3.3
 Identities = 20/68 (29%), Positives = 32/68 (47%), Gaps = 6/68 (8%)
 Frame = -2

Query: 344  VSCNLHNNAIVFFSFESYLQIH-PYHIKTHQMY--SVGICAIC--KITNCGGAYFFR-RH 183
            V C++ N ++ F S+ S L++H   H   H++       C  C   +T+       R  H
Sbjct: 2081 VQCSIRNQSVYFSSY-SLLELHGKLHQNLHELAPEDADDCQDCYETLTSSFEVIVHRINH 2139

Query: 182  HSFKRCFF 159
            H  +RCFF
Sbjct: 2140 HHSRRCFF 2147


>Z68008-5|CAD91696.1| 1160|Caenorhabditis elegans Hypothetical
           protein R08B4.1b protein.
          Length = 1160

 Score = 28.7 bits (61), Expect = 4.3
 Identities = 9/27 (33%), Positives = 19/27 (70%)
 Frame = -2

Query: 341 SCNLHNNAIVFFSFESYLQIHPYHIKT 261
           SC +H+N + +  +E+ +Q  P+++KT
Sbjct: 120 SCRVHDNNLYYLVYETPVQYDPFNMKT 146


>Z68008-4|CAA92000.4| 1137|Caenorhabditis elegans Hypothetical
           protein R08B4.1a protein.
          Length = 1137

 Score = 28.7 bits (61), Expect = 4.3
 Identities = 9/27 (33%), Positives = 19/27 (70%)
 Frame = -2

Query: 341 SCNLHNNAIVFFSFESYLQIHPYHIKT 261
           SC +H+N + +  +E+ +Q  P+++KT
Sbjct: 120 SCRVHDNNLYYLVYETPVQYDPFNMKT 146


>U41275-1|AAA82464.1|  237|Caenorhabditis elegans Hypothetical
           protein T25D1.3 protein.
          Length = 237

 Score = 28.3 bits (60), Expect = 5.7
 Identities = 14/28 (50%), Positives = 19/28 (67%)
 Frame = -3

Query: 160 FFMASPMFLKISSDFIKDLFSSKSFLYA 77
           FF+ S +F  +S+DFI D FSS  F+ A
Sbjct: 73  FFIYSALFRLVSADFI-DFFSSAQFMTA 99


>U00043-1|AAC77509.3|  515|Caenorhabditis elegans Hypothetical
           protein T26A5.6 protein.
          Length = 515

 Score = 28.3 bits (60), Expect = 5.7
 Identities = 14/42 (33%), Positives = 24/42 (57%)
 Frame = +1

Query: 529 MNKECCDVQEEIIDQFSMNRNRIKVIHSDVLDKKDIITTADI 654
           M K+  DV  +I D  S+  N I+ ++   L++   +TTAD+
Sbjct: 312 MKKDLFDVIVKIEDDGSLVHNHIEFVNDTALERVVSLTTADL 353


>AF099915-9|AAC68774.1|  108|Caenorhabditis elegans Hypothetical
           protein E02H9.9 protein.
          Length = 108

 Score = 27.9 bits (59), Expect = 7.6
 Identities = 15/38 (39%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
 Frame = +2

Query: 251 TFDEFLYDKDEFEDMTQKKKIQLHYCVDCN-SRNIKEL 361
           T+D    D D+  D+ Q+ +I +    DCN SRN+K L
Sbjct: 42  TYDVIGNDTDDGADILQEFEIYMLIIHDCNPSRNVKSL 79


>AF038614-2|AAB92061.2|  321|Caenorhabditis elegans Serpentine
           receptor, class v protein4 protein.
          Length = 321

 Score = 27.9 bits (59), Expect = 7.6
 Identities = 18/47 (38%), Positives = 23/47 (48%), Gaps = 6/47 (12%)
 Frame = -3

Query: 184 ITASKGAFFFMASPMFLKISSDFIKDL------FSSKSFLYARLLIH 62
           I A  G  F  ASP F+K+  D ++DL      F   SFLY    +H
Sbjct: 162 IAAPSGGLFLRASPEFIKL--DVLQDLTLSIFCFLVSSFLYLITFVH 206


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,344,933
Number of Sequences: 27780
Number of extensions: 322516
Number of successful extensions: 1000
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 942
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 999
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1655655746
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)