Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0367
         (718 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q4YRU1 Cluster: Putative uncharacterized protein; n=4; ...    34   3.0  
UniRef50_Q4YTB0 Cluster: Putative uncharacterized protein; n=1; ...    33   9.3  
UniRef50_P40467 Cluster: Uncharacterized transcriptional regulat...    33   9.3  

>UniRef50_Q4YRU1 Cluster: Putative uncharacterized protein; n=4;
           Plasmodium (Vinckeia)|Rep: Putative uncharacterized
           protein - Plasmodium berghei
          Length = 1563

 Score = 34.3 bits (75), Expect = 3.0
 Identities = 21/66 (31%), Positives = 33/66 (50%), Gaps = 5/66 (7%)
 Frame = +3

Query: 87  VKELFHYHSYILIYLSEKNTNFGNRTTVCSK--IIIMFS---NVTIRSCSRFSVFLFWSP 251
           + ELF YH YI +Y+      + N  T   K  I I+FS   NV +    + ++++    
Sbjct: 439 IYELFVYHFYIYLYMCWDTDKYRNNNTYVLKKFIYILFSYAENVEMDQIEKENIYMLL-- 496

Query: 252 FICFTH 269
           F+CF H
Sbjct: 497 FLCFCH 502


>UniRef50_Q4YTB0 Cluster: Putative uncharacterized protein; n=1;
           Plasmodium berghei|Rep: Putative uncharacterized protein
           - Plasmodium berghei
          Length = 223

 Score = 32.7 bits (71), Expect = 9.3
 Identities = 18/65 (27%), Positives = 33/65 (50%)
 Frame = +2

Query: 71  VLYFNCQGIISLSFLYIDISK*EKYKFWK*NNCLFKDYYYVLKCNNKVLFQIFCFFILVT 250
           + YF C  ++SL  ++ D+S  E Y F    +  FK++Y     NN+ +F +   F  + 
Sbjct: 99  IYYFMCFDVLSLIMVFGDLSICENYVF-NYLHSSFKNFYRAEDINNEEIFYLMQLFKALK 157

Query: 251 LHLLY 265
           +  +Y
Sbjct: 158 ITKIY 162


>UniRef50_P40467 Cluster: Uncharacterized transcriptional regulatory
           protein YIL130W; n=4; Saccharomycetales|Rep:
           Uncharacterized transcriptional regulatory protein
           YIL130W - Saccharomyces cerevisiae (Baker's yeast)
          Length = 964

 Score = 32.7 bits (71), Expect = 9.3
 Identities = 15/38 (39%), Positives = 22/38 (57%)
 Frame = -1

Query: 256 MKGDQNKKTENLEQDLIVTFENIIIIFEQTVVLFPKFV 143
           MK D N  + N EQD + T+ NI +  E  ++L PK +
Sbjct: 208 MKSDSNSASSNREQDSVDTYSNIPVGREIKIILPPKAI 245


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 719,528,588
Number of Sequences: 1657284
Number of extensions: 14839443
Number of successful extensions: 30411
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 29294
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 30404
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 57851245060
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)