Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0367
         (718 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

08_02_0947 + 22897552-22897614,22898291-22898513,22898599-228988...    29   4.9  
11_03_0002 - 8850264-8850418,8850645-8851772,8851895-8852399           28   8.5  

>08_02_0947 +
           22897552-22897614,22898291-22898513,22898599-22898892,
           22899346-22900598
          Length = 610

 Score = 28.7 bits (61), Expect = 4.9
 Identities = 13/44 (29%), Positives = 26/44 (59%)
 Frame = -1

Query: 250 GDQNKKTENLEQDLIVTFENIIIIFEQTVVLFPKFVFFSLRYIN 119
           G +NK  + + QDLI+ ++ + ++F   +V  P +V+ S+   N
Sbjct: 16  GQKNKDKKGISQDLILAYKTLGVVF-GGLVTSPLYVYPSMNLTN 58


>11_03_0002 - 8850264-8850418,8850645-8851772,8851895-8852399
          Length = 595

 Score = 27.9 bits (59), Expect = 8.5
 Identities = 12/36 (33%), Positives = 19/36 (52%)
 Frame = +2

Query: 83  NCQGIISLSFLYIDISK*EKYKFWK*NNCLFKDYYY 190
           NC   +  SF+ +D+ + E Y     N  LF +YY+
Sbjct: 206 NCSSTVEESFV-LDVKRGESYLLRVINTALFSEYYF 240


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,493,822
Number of Sequences: 37544
Number of extensions: 377767
Number of successful extensions: 667
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 647
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 667
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1862792824
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)