Bombyx BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0367
         (718 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_21787| Best HMM Match : 7tm_1 (HMM E-Value=8.8e-37)                 31   0.93 
SB_29500| Best HMM Match : No HMM Matches (HMM E-Value=.)              30   1.6  
SB_21643| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   2.8  

>SB_21787| Best HMM Match : 7tm_1 (HMM E-Value=8.8e-37)
          Length = 395

 Score = 31.1 bits (67), Expect = 0.93
 Identities = 15/51 (29%), Positives = 26/51 (50%)
 Frame = -1

Query: 268 CVKQMKGDQNKKTENLEQDLIVTFENIIIIFEQTVVLFPKFVFFSLRYINI 116
           C ++    +  + E LE DL+     I+++F   +  FP  +FF L Y N+
Sbjct: 289 CQRRETNIEGNQLEELEHDLLRMIYVIVLVF--IICYFPYQLFFILEYFNV 337


>SB_29500| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 280

 Score = 30.3 bits (65), Expect = 1.6
 Identities = 22/76 (28%), Positives = 31/76 (40%)
 Frame = +3

Query: 63  LYLSYISIVKELFHYHSYILIYLSEKNTNFGNRTTVCSKIIIMFSNVTIRSCSRFSVFLF 242
           LY  Y   +KELF +   I   LS+  T    RTT+C  +  M   V    C   +   +
Sbjct: 81  LYREYDGDIKELFGHAKIIDFGLSKLVTPGERRTTICGTLQYMAPEVLKGECYTAACDWW 140

Query: 243 WSPFICFTHLRSHGPF 290
               + FT L    P+
Sbjct: 141 SLGIVMFTLLAGKYPY 156


>SB_21643| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1974

 Score = 29.5 bits (63), Expect = 2.8
 Identities = 16/32 (50%), Positives = 20/32 (62%)
 Frame = -1

Query: 508 NFLYLITIVTPA*TTHRYFLKPKQD*TITHHM 413
           N LYLI I T     H+  LK K+D T+T+HM
Sbjct: 82  NQLYLIGIATWGIVDHKETLKEKKD-TVTYHM 112


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,371,167
Number of Sequences: 59808
Number of extensions: 470907
Number of successful extensions: 774
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 741
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 774
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1901817086
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)