Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0366
         (715 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate 1-deca...    23   1.9  
U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse ...    22   4.3  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    22   4.3  
Z69742-1|CAA93624.1|   72|Tribolium castaneum arylphorin protein.      22   5.7  
AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc fin...    21   7.5  
EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock prote...    21   9.9  

>EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate
           1-decarboxylase protein.
          Length = 540

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 10/25 (40%), Positives = 14/25 (56%), Gaps = 2/25 (8%)
 Frame = -3

Query: 602 LWLYLEPVWGG--TPGANHQRELYG 534
           LWL+++  WGG     A H+  L G
Sbjct: 315 LWLHVDAAWGGGALVSAKHRHLLKG 339


>U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse
           transcriptase andRNase H protein.
          Length = 712

 Score = 22.2 bits (45), Expect = 4.3
 Identities = 9/19 (47%), Positives = 13/19 (68%)
 Frame = -2

Query: 378 LCNVLHKRLARNTASSQDI 322
           LCN   K  AR +A++QD+
Sbjct: 541 LCNFYRKFCARYSAATQDL 559


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 22.2 bits (45), Expect = 4.3
 Identities = 10/34 (29%), Positives = 17/34 (50%)
 Frame = +1

Query: 229 YRKCRLFASHCSRV*HIRHGISFLCSGYL*FYIL 330
           Y   R++  +C  +    H +  LCSGY   ++L
Sbjct: 51  YNLRRIYYFYCVSITFNVHLLFLLCSGYFTVHLL 84


>Z69742-1|CAA93624.1|   72|Tribolium castaneum arylphorin protein.
          Length = 72

 Score = 21.8 bits (44), Expect = 5.7
 Identities = 10/31 (32%), Positives = 16/31 (51%)
 Frame = +2

Query: 359 LWRTLHRCEHHNIPVRVLYFIGSAVVDDTGI 451
           LW+   RCE  +   R  + +G+ VV   G+
Sbjct: 4   LWKVRGRCEGKDSKWRGEHMVGTIVVVVRGV 34


>AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc finger
           protein protein.
          Length = 456

 Score = 21.4 bits (43), Expect = 7.5
 Identities = 12/33 (36%), Positives = 18/33 (54%)
 Frame = -2

Query: 480 PSERSTDAASIPVSSTTALPMKYNTRTGML*CS 382
           PS  ST + S+P   T+     Y++R+ M  CS
Sbjct: 75  PSPSSTPS-SLPTQRTSTSNPTYSSRSVMTSCS 106


>EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock protein
           90 protein.
          Length = 721

 Score = 21.0 bits (42), Expect = 9.9
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = +3

Query: 69  YLRVVVVIQNCEKL 110
           Y+R V ++ NCE+L
Sbjct: 353 YVRRVFIMDNCEEL 366


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 192,296
Number of Sequences: 336
Number of extensions: 4584
Number of successful extensions: 7
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18947110
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)