Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0366
         (715 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81038-3|CAB02759.1|  316|Caenorhabditis elegans Hypothetical pr...    64   1e-10
U64840-3|AAB04961.2|  317|Caenorhabditis elegans Serpentine rece...    29   2.5  
U50197-2|AAA91255.2|  624|Caenorhabditis elegans Hypothetical pr...    28   5.8  
AL032643-5|CAA21656.1|  622|Caenorhabditis elegans Hypothetical ...    28   5.8  
AF101318-12|AAC69350.2|  400|Caenorhabditis elegans Hypothetical...    28   7.6  
AC006608-4|AAF39758.2|  381|Caenorhabditis elegans Hypothetical ...    28   7.6  

>Z81038-3|CAB02759.1|  316|Caenorhabditis elegans Hypothetical
           protein C25A1.5 protein.
          Length = 316

 Score = 63.7 bits (148), Expect = 1e-10
 Identities = 30/80 (37%), Positives = 43/80 (53%)
 Frame = +3

Query: 246 FREPLLESLTYTPWYFVPMFWIPVILYLGWTQYYEQVACGEHCTDANITTFQYVYYISLG 425
           F   +LES+T T W+ VP  W+P+++    T     V      TD   +   +  +  +G
Sbjct: 116 FDSDVLESMTRTAWWVVPAVWMPIVI----TFSILSVLSFSTSTDVYNSILLWSAWFVIG 171

Query: 426 VLLWTILEYSLHRWIFHLDP 485
           VL WT+ EYSLHRW+FH  P
Sbjct: 172 VLTWTLTEYSLHRWVFHWKP 191



 Score = 55.2 bits (127), Expect = 4e-08
 Identities = 25/50 (50%), Positives = 28/50 (56%)
 Frame = +2

Query: 509 LHFLIHGMHHKVPFDGLRQVFPPIPALGITTIIYSALRPFLPYPVLVLTG 658
           LHFL HG+HHK P DG R VFPP+PA  I  I Y        +PV    G
Sbjct: 201 LHFLAHGLHHKTPMDGDRLVFPPVPATLIVGIFYLIYSNTFQWPVFCAFG 250



 Score = 45.2 bits (102), Expect = 5e-05
 Identities = 16/25 (64%), Positives = 20/25 (80%)
 Frame = +1

Query: 640 CASADRRLIGYLTYDMIHYYVHHGS 714
           CA    +L GY+TYDM+HYY+HHGS
Sbjct: 247 CAFGAGKLFGYVTYDMVHYYLHHGS 271


>U64840-3|AAB04961.2|  317|Caenorhabditis elegans Serpentine
           receptor, class g (gamma)protein 67 protein.
          Length = 317

 Score = 29.5 bits (63), Expect = 2.5
 Identities = 12/24 (50%), Positives = 15/24 (62%)
 Frame = +3

Query: 294 VPMFWIPVILYLGWTQYYEQVACG 365
           +  FW P I  + W+QYY  VACG
Sbjct: 124 ISSFWWPTIYEMFWSQYY--VACG 145


>U50197-2|AAA91255.2|  624|Caenorhabditis elegans Hypothetical
           protein F25E2.2 protein.
          Length = 624

 Score = 28.3 bits (60), Expect = 5.8
 Identities = 11/26 (42%), Positives = 17/26 (65%)
 Frame = -2

Query: 492 TTPGPSERSTDAASIPVSSTTALPMK 415
           TTP P+  ST +    +++TTA P+K
Sbjct: 454 TTPAPTTTSTTSIPTTIATTTAAPLK 479


>AL032643-5|CAA21656.1|  622|Caenorhabditis elegans Hypothetical
           protein Y54E5A.7 protein.
          Length = 622

 Score = 28.3 bits (60), Expect = 5.8
 Identities = 13/24 (54%), Positives = 14/24 (58%)
 Frame = +1

Query: 637 PCASADRRLIGYLTYDMIHYYVHH 708
           P + A RR I     DMI YYVHH
Sbjct: 496 PLSFALRRFIANSVVDMICYYVHH 519


>AF101318-12|AAC69350.2|  400|Caenorhabditis elegans Hypothetical
           protein Y73C8C.10 protein.
          Length = 400

 Score = 27.9 bits (59), Expect = 7.6
 Identities = 12/26 (46%), Positives = 17/26 (65%)
 Frame = -1

Query: 148 GYSVIRVHGAEKFNFSQF*ITTTTRR 71
           G+  I++HGA  + FSQF   TT +R
Sbjct: 189 GFDGIQLHGAHGYLFSQFTSPTTNKR 214


>AC006608-4|AAF39758.2|  381|Caenorhabditis elegans Hypothetical
           protein C15F1.5a protein.
          Length = 381

 Score = 27.9 bits (59), Expect = 7.6
 Identities = 12/30 (40%), Positives = 16/30 (53%)
 Frame = -3

Query: 587 EPVWGGTPGANHQRELYGACRVLRNAVDHD 498
           EP+     G N QR++ G   +LR A  HD
Sbjct: 55  EPMTSTCEGENCQRKIMGNAEILRTACHHD 84


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,433,590
Number of Sequences: 27780
Number of extensions: 427336
Number of successful extensions: 1045
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 984
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1044
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1666201324
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)