Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0366
         (715 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             25   0.94 
DQ011228-1|AAY63897.1|  486|Apis mellifera Amt-2-like protein pr...    23   2.9  
AY661557-1|AAT74557.1|  411|Apis mellifera yellow-f-like protein...    23   3.8  
EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.          22   5.0  
AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.      22   5.0  
Z26319-1|CAA81228.1|  464|Apis mellifera royal jelly protein RJP...    22   6.6  
AY898652-1|AAX83121.1|  349|Apis mellifera AKH receptor protein.       21   8.8  

>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 24.6 bits (51), Expect = 0.94
 Identities = 11/30 (36%), Positives = 16/30 (53%)
 Frame = -3

Query: 509  VDHDERRPRVQVKDPPMQRVFQYRPQQHSQ 420
            VDH  ++ + Q      Q+  Q +PQQ SQ
Sbjct: 1493 VDHSSQKTQQQQPQQQQQQQQQQQPQQQSQ 1522


>DQ011228-1|AAY63897.1|  486|Apis mellifera Amt-2-like protein
           protein.
          Length = 486

 Score = 23.0 bits (47), Expect = 2.9
 Identities = 16/51 (31%), Positives = 22/51 (43%)
 Frame = +3

Query: 321 LYLGWTQYYEQVACGEHCTDANITTFQYVYYISLGVLLWTILEYSLHRWIF 473
           L  GW+      A    CT   +     V YI +G LL  I++  L  WI+
Sbjct: 131 LITGWSAVVITAAI---CTSGIVGRTHTVGYIIIGFLLAGIVQPFLIHWIW 178


>AY661557-1|AAT74557.1|  411|Apis mellifera yellow-f-like protein
           protein.
          Length = 411

 Score = 22.6 bits (46), Expect = 3.8
 Identities = 13/40 (32%), Positives = 18/40 (45%)
 Frame = +1

Query: 307 GYL*FYILAGRSITSKSLVENIAQMRTSQHSSTCIIFHWE 426
           GY   Y  A  SI   S+   + Q  T + S+    FH+E
Sbjct: 251 GYKILYFHAMSSIAEFSVSTEVLQDHTLEKSNDYYAFHFE 290


>EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.
          Length = 683

 Score = 22.2 bits (45), Expect = 5.0
 Identities = 11/27 (40%), Positives = 17/27 (62%)
 Frame = -2

Query: 279 YMLDSRAMAREKSTFPVDRAVNPFLVV 199
           ++ D RAM      FP+D+ V+P L+V
Sbjct: 639 HIYDGRAMG-----FPLDKPVDPLLLV 660


>AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.
          Length = 683

 Score = 22.2 bits (45), Expect = 5.0
 Identities = 11/27 (40%), Positives = 17/27 (62%)
 Frame = -2

Query: 279 YMLDSRAMAREKSTFPVDRAVNPFLVV 199
           ++ D RAM      FP+D+ V+P L+V
Sbjct: 639 HIYDGRAMG-----FPLDKPVDPLLLV 660


>Z26319-1|CAA81228.1|  464|Apis mellifera royal jelly protein
           RJP57-2 protein.
          Length = 464

 Score = 21.8 bits (44), Expect = 6.6
 Identities = 9/27 (33%), Positives = 14/27 (51%)
 Frame = -2

Query: 342 TASSQDIKLQVSRT*ERNTMAYMLDSR 262
           T   + + L V      NTM YM+D++
Sbjct: 182 TGKGELVSLTVQAMDSTNTMVYMVDNK 208


>AY898652-1|AAX83121.1|  349|Apis mellifera AKH receptor protein.
          Length = 349

 Score = 21.4 bits (43), Expect = 8.8
 Identities = 5/20 (25%), Positives = 14/20 (70%)
 Frame = +3

Query: 270 LTYTPWYFVPMFWIPVILYL 329
           +TY+ +  + M+W P+++ +
Sbjct: 202 ITYSLFGMIMMYWFPLVVII 221


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 232,292
Number of Sequences: 438
Number of extensions: 5818
Number of successful extensions: 14
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 22048515
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)