Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0366
         (715 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At4g20870.1 68417.m03027 fatty acid hydroxylase, putative simila...    53   2e-07
At2g34770.1 68415.m04269 fatty acid hydroxylase (FAH1) identical...    51   9e-07
At1g11000.1 68414.m01263 seven transmembrane MLO family protein ...    31   1.0  
At4g13470.1 68417.m02103 hypothetical protein                          29   3.1  
At5g07320.1 68418.m00836 mitochondrial substrate carrier family ...    28   7.1  
At4g16950.2 68417.m02557 disease resistance protein (TIR-NBS-LRR...    27   9.3  
At4g16950.1 68417.m02556 disease resistance protein (TIR-NBS-LRR...    27   9.3  

>At4g20870.1 68417.m03027 fatty acid hydroxylase, putative similar
           to fatty acid hydroxylase Fah1p GB:AF021804 GI:2736147
           from [Arabidopsis thaliana]
          Length = 237

 Score = 52.8 bits (121), Expect = 2e-07
 Identities = 27/82 (32%), Positives = 43/82 (52%)
 Frame = +3

Query: 246 FREPLLESLTYTPWYFVPMFWIPVILYLGWTQYYEQVACGEHCTDANITTFQYVYYISLG 425
           F     E LT T W+ +P  W+PV+ Y+        ++  +      +T  Q    ++ G
Sbjct: 42  FESDFWEFLTRTVWWAIPTIWLPVVCYV------LSISASK-----GLTFPQIGLIVAFG 90

Query: 426 VLLWTILEYSLHRWIFHLDPGS 491
           VL WT+LEY+LHR++FH+   S
Sbjct: 91  VLTWTLLEYTLHRFLFHIQTKS 112



 Score = 42.3 bits (95), Expect = 3e-04
 Identities = 16/22 (72%), Positives = 18/22 (81%)
 Frame = +2

Query: 512 HFLIHGMHHKVPFDGLRQVFPP 577
           H+L+HG HHK P DGLR VFPP
Sbjct: 119 HYLLHGCHHKHPQDGLRLVFPP 140



 Score = 34.3 bits (75), Expect = 0.081
 Identities = 11/17 (64%), Positives = 14/17 (82%)
 Frame = +1

Query: 661 LIGYLTYDMIHYYVHHG 711
           L GY+ YD+ HYY+HHG
Sbjct: 171 LFGYVMYDITHYYLHHG 187


>At2g34770.1 68415.m04269 fatty acid hydroxylase (FAH1) identical to
           fatty acid hydroxylase Fah1p GB:AF021804 GI:2736147 from
           [Arabidopsis thaliana]
          Length = 237

 Score = 50.8 bits (116), Expect = 9e-07
 Identities = 23/78 (29%), Positives = 39/78 (50%)
 Frame = +3

Query: 246 FREPLLESLTYTPWYFVPMFWIPVILYLGWTQYYEQVACGEHCTDANITTFQYVYYISLG 425
           F+    E LT T W+ VP+ W+PV+++           C         +  + V  + +G
Sbjct: 42  FQSDFWEFLTLTVWWAVPVIWLPVVVW-----------CISRSVSMGCSLPEIVPIVVMG 90

Query: 426 VLLWTILEYSLHRWIFHL 479
           + +WT  EY LHR++FH+
Sbjct: 91  IFIWTFFEYVLHRFVFHI 108



 Score = 41.1 bits (92), Expect = 7e-04
 Identities = 16/22 (72%), Positives = 17/22 (77%)
 Frame = +2

Query: 512 HFLIHGMHHKVPFDGLRQVFPP 577
           H+LIHG HHK P D LR VFPP
Sbjct: 119 HYLIHGCHHKHPMDHLRLVFPP 140



 Score = 31.9 bits (69), Expect = 0.43
 Identities = 9/16 (56%), Positives = 14/16 (87%)
 Frame = +1

Query: 661 LIGYLTYDMIHYYVHH 708
           ++GY+ YD+ HYY+HH
Sbjct: 171 MLGYVMYDVTHYYLHH 186



 Score = 29.1 bits (62), Expect = 3.1
 Identities = 11/29 (37%), Positives = 18/29 (62%)
 Frame = +1

Query: 151 LDWSKPLLCQLHAIAPDYEKWVNSAVYRK 237
           +D  KPL+ Q+  +  DYE+WV+  +  K
Sbjct: 8   VDLKKPLVFQVGHLGEDYEEWVHQPIATK 36


>At1g11000.1 68414.m01263 seven transmembrane MLO family protein /
           MLO-like protein 4 (MLO4) identical to membrane protein
           Mlo4 [Arabidopsis thaliana] gi|14091578|gb|AAK53797;
           similar to MLO protein SWISS-PROT:P93766,
           NCBI_gi:1877221 [Hordeum vulgare][Barley]
          Length = 573

 Score = 30.7 bits (66), Expect = 1.0
 Identities = 14/40 (35%), Positives = 22/40 (55%)
 Frame = +2

Query: 500 HDQLHFLIHGMHHKVPFDGLRQVFPPIPALGITTIIYSAL 619
           H+  H   HG    V ++GL Q+   +  LGIT ++YS +
Sbjct: 127 HEASHQCGHGREPFVSYEGLEQLLRFLFVLGITHVLYSGI 166


>At4g13470.1 68417.m02103 hypothetical protein
          Length = 256

 Score = 29.1 bits (62), Expect = 3.1
 Identities = 13/36 (36%), Positives = 20/36 (55%)
 Frame = +1

Query: 337 RSITSKSLVENIAQMRTSQHSSTCIIFHWECCCGRY 444
           R+ T  S+ + I  +R  +H  TC I  W+CC G +
Sbjct: 108 RTATLNSIEDEIDALR-QRHDPTCDIPLWKCCNGSF 142


>At5g07320.1 68418.m00836 mitochondrial substrate carrier family
           protein similar to peroxisomal Ca-dependent solute
           carrier [Oryctolagus cuniculus] GI:2352427
           (mitochondrial carrier superfamily); contains
           INTERPRO:IPR001993 Mitochondrial substrate carrier
           family, INTERPRO:IPR002048 calcium-binding EF-hand
           domain
          Length = 479

 Score = 27.9 bits (59), Expect = 7.1
 Identities = 14/49 (28%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
 Frame = -3

Query: 566 PGANHQRELYGACRVLRNA-VDHDERRPRVQVKDPPMQRVFQYRPQQHS 423
           P   + R+L+  C   R+  VD+ E R  +  K+  + R+FQ    +H+
Sbjct: 69  PEYKYARDLFRVCDANRDGRVDYQEFRRYIDAKELELYRIFQAIDVEHN 117


>At4g16950.2 68417.m02557 disease resistance protein (TIR-NBS-LRR
            class), putative domain signature TIR-NBS-LRR exists,
            suggestive of a disease resistance protein.; closest
            homolog in Col-0 to RPP5 of clutivar Landsberg erecta.
          Length = 1404

 Score = 27.5 bits (58), Expect = 9.3
 Identities = 11/22 (50%), Positives = 16/22 (72%)
 Frame = +2

Query: 422  GSAVVDDTGILAASVDLSLGPG 487
            G  +V DTG+ A +++LSLG G
Sbjct: 1347 GDQIVADTGLAALNMELSLGEG 1368


>At4g16950.1 68417.m02556 disease resistance protein (TIR-NBS-LRR
            class), putative domain signature TIR-NBS-LRR exists,
            suggestive of a disease resistance protein.; closest
            homolog in Col-0 to RPP5 of clutivar Landsberg erecta.
          Length = 1449

 Score = 27.5 bits (58), Expect = 9.3
 Identities = 11/22 (50%), Positives = 16/22 (72%)
 Frame = +2

Query: 422  GSAVVDDTGILAASVDLSLGPG 487
            G  +V DTG+ A +++LSLG G
Sbjct: 1383 GDQIVADTGLAALNMELSLGEG 1404


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,112,330
Number of Sequences: 28952
Number of extensions: 385923
Number of successful extensions: 914
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 881
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 912
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1545769616
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)