Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0365
         (729 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY299455-1|AAQ73620.1|  493|Anopheles gambiae FMRF amide recepto...    28   0.34 
AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA topoi...    27   0.59 
AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal...    27   0.79 
AY578809-1|AAT07314.1|  358|Anopheles gambiae Sloan-Kettering In...    25   2.4  
CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transpos...    23   9.7  
AY805323-1|AAV66543.1|  459|Anopheles gambiae beta subunit-GABA-...    23   9.7  

>AY299455-1|AAQ73620.1|  493|Anopheles gambiae FMRF amide receptor
           protein.
          Length = 493

 Score = 27.9 bits (59), Expect = 0.34
 Identities = 11/34 (32%), Positives = 20/34 (58%)
 Frame = -2

Query: 104 LSLVEVFNSVQEVLVGFLRCDNIFVRKRVLLLSL 3
           LS  ++ +S+  +L+G  RCD + +   VL+  L
Sbjct: 108 LSRPQMRSSINYLLIGLARCDTVLILTSVLIFGL 141


>AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA
           topoisomerase protein.
          Length = 1039

 Score = 27.1 bits (57), Expect = 0.59
 Identities = 18/36 (50%), Positives = 23/36 (63%)
 Frame = -2

Query: 443 YVAIAQAVLPLYKNKNKTCNGRRKSI*LTSILKYGD 336
           Y+ + QAVLPL KN N  CN  R+SI L  I++  D
Sbjct: 536 YIVLVQAVLPLDKNLN-DCN--RQSI-LGRIIRVTD 567


>AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal
           growth factor receptorprotein.
          Length = 1433

 Score = 26.6 bits (56), Expect = 0.79
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = -3

Query: 454 RGCCTSPLPRQCCH 413
           +G C  P PR+CCH
Sbjct: 190 QGRCFGPKPRECCH 203


>AY578809-1|AAT07314.1|  358|Anopheles gambiae Sloan-Kettering
           Institute proto-oncogeneproduct protein.
          Length = 358

 Score = 25.0 bits (52), Expect = 2.4
 Identities = 11/34 (32%), Positives = 18/34 (52%)
 Frame = +1

Query: 313 TRKCISLVSPYFNIDVSQIDLRRPLQVLFLFLYN 414
           TR C+  +     +D S   + R +Q L ++LYN
Sbjct: 133 TRLCLPQIFNNILMDFSVEQINRSIQELMIYLYN 166


>CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transposon
           polyprotein protein.
          Length = 1726

 Score = 23.0 bits (47), Expect = 9.7
 Identities = 8/28 (28%), Positives = 17/28 (60%)
 Frame = -2

Query: 236 RFRVLQLSGIEVLDAVQEFVLFLLRFDS 153
           R ++  L  +E+++ +Q+F  F   FD+
Sbjct: 7   RVKMFNLKRVEIMNTLQDFEEFTKSFDA 34


>AY805323-1|AAV66543.1|  459|Anopheles gambiae beta
           subunit-GABA-A-gated chloride channelprotein.
          Length = 459

 Score = 23.0 bits (47), Expect = 9.7
 Identities = 9/32 (28%), Positives = 18/32 (56%)
 Frame = -2

Query: 221 QLSGIEVLDAVQEFVLFLLRFDSFDRGQWILF 126
           ++  + V+D     V+F + F +F+ G WI +
Sbjct: 426 KIKDVNVIDKYSR-VIFPVSFAAFNAGYWIFY 456


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 685,763
Number of Sequences: 2352
Number of extensions: 13582
Number of successful extensions: 25
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 74428737
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)