Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0363
(678 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_56043| Best HMM Match : No HMM Matches (HMM E-Value=.) 113 1e-27
SB_14012| Best HMM Match : No HMM Matches (HMM E-Value=.) 58 5e-09
SB_52342| Best HMM Match : ABC_tran (HMM E-Value=5.29999e-41) 37 0.013
SB_38838| Best HMM Match : ABC_tran (HMM E-Value=0.24) 32 0.018
SB_25408| Best HMM Match : ABC_tran (HMM E-Value=0) 34 0.12
SB_22546| Best HMM Match : ABC_tran (HMM E-Value=0) 33 0.28
SB_10268| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.37
SB_23757| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.1
SB_31235| Best HMM Match : DUF220 (HMM E-Value=7.1) 31 1.1
SB_6941| Best HMM Match : ABC_tran (HMM E-Value=0.023) 30 1.5
SB_52755| Best HMM Match : 7tm_1 (HMM E-Value=2.9e-16) 30 1.5
SB_46433| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.0
SB_58981| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.6
SB_4913| Best HMM Match : CBF (HMM E-Value=2.9) 29 2.6
SB_57924| Best HMM Match : PG_binding_1 (HMM E-Value=3.5) 29 2.6
SB_3171| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.6
SB_25617| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.5
SB_35301| Best HMM Match : ABC_tran (HMM E-Value=0) 29 4.6
SB_42630| Best HMM Match : Ets (HMM E-Value=0) 28 6.0
SB_39746| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.0
SB_37142| Best HMM Match : Peptidase_A22B (HMM E-Value=0) 28 6.0
SB_34715| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.0
SB_12510| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.0
SB_47984| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.0
SB_189| Best HMM Match : Peptidase_A17 (HMM E-Value=1.9e-35) 28 8.0
>SB_56043| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 626
Score = 113 bits (271), Expect = 2e-25
Identities = 54/83 (65%), Positives = 68/83 (81%)
Frame = +2
Query: 2 FRVRMNRAENQAGNTAIDSLINYETVKYFNNERHELEKYDAXLRQYESASLKTAWSLAAL 181
FR +MN+A+N+AG AIDSLINYETVKYFNNE +E ++YD L +YE ASLKT SLA L
Sbjct: 255 FRSQMNKADNEAGAQAIDSLINYETVKYFNNEVYEADRYDKLLARYEQASLKTTTSLAFL 314
Query: 182 NFGQHAIFSAGLSLVMLLAAREI 250
N+GQ+ IFSA LS +MLLA+++I
Sbjct: 315 NWGQNFIFSASLSAIMLLASKQI 337
Score = 91.5 bits (217), Expect(2) = 1e-27
Identities = 44/80 (55%), Positives = 62/80 (77%), Gaps = 2/80 (2%)
Frame = +1
Query: 256 GSMTVGDLVXVNGLLFQLSIPLGFLGSVYREVRQALVDMQTMFTLMTVQSRIKEIQKAPP 435
G+MTVGDLV VNGLLFQLS+PL FLG VYR++RQALVDM+T+F+L +Q+ I+E A P
Sbjct: 340 GTMTVGDLVMVNGLLFQLSVPLNFLGPVYRDLRQALVDMETLFSLHRLQTSIQERADAAP 399
Query: 436 MIVDS--RTATIEFRDVNFK 489
+++ + + + F DV+F+
Sbjct: 400 LLLKAGDSQSHVTFEDVSFQ 419
Score = 50.0 bits (114), Expect(2) = 1e-27
Identities = 23/43 (53%), Positives = 29/43 (67%)
Frame = +1
Query: 490 KSTMVRRCTDSFEPQSGNIFINGQNIRDVDLVSLRKAIAVVPQ 618
KST+VR F+PQ G + + GQ+IRD L SLRK + VVPQ
Sbjct: 450 KSTIVRLLFRFFDPQGGRVLVAGQDIRDFSLESLRKVVGVVPQ 492
Score = 30.3 bits (65), Expect = 1.5
Identities = 8/16 (50%), Positives = 16/16 (100%)
Frame = +3
Query: 618 DCVLFHDTIFHNLHYG 665
+CVLFH+++++N++YG
Sbjct: 493 ECVLFHNSVYYNINYG 508
>SB_14012| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 101
Score = 58.4 bits (135), Expect = 5e-09
Identities = 28/72 (38%), Positives = 44/72 (61%)
Frame = +2
Query: 2 FRVRMNRAENQAGNTAIDSLINYETVKYFNNERHELEKYDAXLRQYESASLKTAWSLAAL 181
FR MN +N A A+DSL+N+ETVKY++ E E+ + + + Y+ + + SLA L
Sbjct: 13 FRRSMNVKDNDAKAKAVDSLLNFETVKYYSGEAFEVNRLNQLILGYQDSEWQVLGSLAVL 72
Query: 182 NFGQHAIFSAGL 217
N Q+ I ++GL
Sbjct: 73 NTVQNVIITSGL 84
>SB_52342| Best HMM Match : ABC_tran (HMM E-Value=5.29999e-41)
Length = 336
Score = 37.1 bits (82), Expect = 0.013
Identities = 38/118 (32%), Positives = 54/118 (45%)
Frame = +1
Query: 265 TVGDLVXVNGLLFQLSIPLGFLGSVYREVRQALVDMQTMFTLMTVQSRIKEIQKAPPMIV 444
TVGD V + QL +PL F G+ YR+ V FT+ Q+ ++
Sbjct: 128 TVGDFVLYVTYIVQLYVPLNFFGTYYRKP----VLKNISFTVFPGQTLA--------LVG 175
Query: 445 DSRTATIEFRDVNFKKSTMVRRCTDSFEPQSGNIFINGQNIRDVDLVSLRKAIAVVPQ 618
+S KST++R ++ SG I I+GQ+I V SLR+ I VVPQ
Sbjct: 176 NSGGG----------KSTIIRLLYRFYDVGSGCISIDGQDISKVTSKSLRQVIGVVPQ 223
Score = 31.5 bits (68), Expect = 0.65
Identities = 15/29 (51%), Positives = 19/29 (65%)
Frame = +2
Query: 2 FRVRMNRAENQAGNTAIDSLINYETVKYF 88
FR MN +N A A+DSL+N+ETV F
Sbjct: 104 FRRSMNVKDNDAKAKAVDSLLNFETVGDF 132
>SB_38838| Best HMM Match : ABC_tran (HMM E-Value=0.24)
Length = 169
Score = 32.3 bits (70), Expect(2) = 0.018
Identities = 16/43 (37%), Positives = 24/43 (55%)
Frame = +1
Query: 490 KSTMVRRCTDSFEPQSGNIFINGQNIRDVDLVSLRKAIAVVPQ 618
K+T ++ ++ G I I+GQ+I V SLR IA+V Q
Sbjct: 106 KTTFIKLIQRLYDVNGGRIAIDGQDIAQVRQASLRSQIAIVQQ 148
Score = 23.4 bits (48), Expect(2) = 0.018
Identities = 18/75 (24%), Positives = 34/75 (45%)
Frame = +1
Query: 265 TVGDLVXVNGLLFQLSIPLGFLGSVYREVRQALVDMQTMFTLMTVQSRIKEIQKAPPMIV 444
+VGD+ + F L L +G R +++++ DM+ + L + + A + V
Sbjct: 2 SVGDVTFALTMFFMLQGHLRDVGMHIRNLQRSVNDMEELVALEKQPLGVDDRPGAGQIRV 61
Query: 445 DSRTATIEFRDVNFK 489
+ I F DV F+
Sbjct: 62 TA--GEIRFEDVTFR 74
>SB_25408| Best HMM Match : ABC_tran (HMM E-Value=0)
Length = 1636
Score = 33.9 bits (74), Expect = 0.12
Identities = 16/43 (37%), Positives = 26/43 (60%)
Frame = +1
Query: 490 KSTMVRRCTDSFEPQSGNIFINGQNIRDVDLVSLRKAIAVVPQ 618
K+T++ T F P SGN +NG +I D D+ +R ++ + PQ
Sbjct: 348 KTTLMSMLTGLFPPTSGNAVVNGCSITD-DISGVRSSLDLCPQ 389
>SB_22546| Best HMM Match : ABC_tran (HMM E-Value=0)
Length = 844
Score = 32.7 bits (71), Expect = 0.28
Identities = 15/43 (34%), Positives = 27/43 (62%)
Frame = +1
Query: 490 KSTMVRRCTDSFEPQSGNIFINGQNIRDVDLVSLRKAIAVVPQ 618
KST+++ ++P G + ++G +IR ++L LR+ I VV Q
Sbjct: 158 KSTLIKLVQRFYDPAEGTVCMDGIDIRSLNLKWLRQHIGVVSQ 200
Score = 31.9 bits (69), Expect = 0.49
Identities = 15/43 (34%), Positives = 24/43 (55%)
Frame = +1
Query: 490 KSTMVRRCTDSFEPQSGNIFINGQNIRDVDLVSLRKAIAVVPQ 618
KST V ++P+ G + I+ N+R ++L LR I +V Q
Sbjct: 708 KSTTVSLLERFYDPEDGEMAIDNANVRQLNLKWLRSKIGIVSQ 750
>SB_10268| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 421
Score = 32.3 bits (70), Expect = 0.37
Identities = 17/43 (39%), Positives = 25/43 (58%)
Frame = +1
Query: 490 KSTMVRRCTDSFEPQSGNIFINGQNIRDVDLVSLRKAIAVVPQ 618
KST++ ++P +GNI I +I +DL RK IA+V Q
Sbjct: 199 KSTVISLIERFYDPMTGNIRIGDTDISLLDLAWYRKKIALVSQ 241
>SB_23757| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2834
Score = 30.7 bits (66), Expect = 1.1
Identities = 18/62 (29%), Positives = 28/62 (45%), Gaps = 1/62 (1%)
Frame = +1
Query: 415 EIQKAPPMIVDSRTATIEFRDV-NFKKSTMVRRCTDSFEPQSGNIFINGQNIRDVDLVSL 591
++++ ++V + T E D N S R C +FEPQ G +DVD S+
Sbjct: 626 KVEQGTTLVVSKKQDTTEDNDASNESSSHATRACCLNFEPQGGETPKTSDPKQDVDATSV 685
Query: 592 RK 597
K
Sbjct: 686 FK 687
>SB_31235| Best HMM Match : DUF220 (HMM E-Value=7.1)
Length = 193
Score = 30.7 bits (66), Expect = 1.1
Identities = 27/86 (31%), Positives = 43/86 (50%), Gaps = 1/86 (1%)
Frame = +1
Query: 334 SVYREVRQALVDMQTMFTLMTVQSRIKEIQKAPPMIVDSRTATIEFRDVNFKK-STMVRR 510
SV R R+ L + QT L +I + VD T++ R V+ +K S V +
Sbjct: 6 SVRRPKRRFLGNQQTK--LQETSPKIAKKDDVDETRVDVNTSSR--RSVSSQKLSKDVPK 61
Query: 511 CTDSFEPQSGNIFINGQNIRDVDLVS 588
+ SF+ QSG FI G + D++++S
Sbjct: 62 LSTSFQEQSGEPFITGYRLIDMEILS 87
>SB_6941| Best HMM Match : ABC_tran (HMM E-Value=0.023)
Length = 92
Score = 30.3 bits (65), Expect = 1.5
Identities = 12/43 (27%), Positives = 25/43 (58%)
Frame = +1
Query: 490 KSTMVRRCTDSFEPQSGNIFINGQNIRDVDLVSLRKAIAVVPQ 618
KST V ++P+ G + ++ +++R +++ LR I +V Q
Sbjct: 5 KSTTVSLLERFYDPEEGKVAVDNRDVRQLNIKWLRSKIGIVSQ 47
>SB_52755| Best HMM Match : 7tm_1 (HMM E-Value=2.9e-16)
Length = 366
Score = 30.3 bits (65), Expect = 1.5
Identities = 19/51 (37%), Positives = 27/51 (52%)
Frame = -2
Query: 491 FLKFTSLNSIVAVLLSTIIGGAFCISLIRDCTVMSVNMVCMSTSAWRTSRY 339
FL+ T S+V++ LS ++ G I LI C N VC T+ TSR+
Sbjct: 64 FLRTTMNYSLVSLALSDLLSGLVAIPLITLCNYTHDNYVC--TAMDLTSRF 112
>SB_46433| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1011
Score = 29.9 bits (64), Expect = 2.0
Identities = 14/30 (46%), Positives = 20/30 (66%)
Frame = +1
Query: 529 PQSGNIFINGQNIRDVDLVSLRKAIAVVPQ 618
P G I I+G +I+ + L LRK ++VVPQ
Sbjct: 830 PPEGEISIDGHDIKCLYLQELRKHLSVVPQ 859
>SB_58981| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 794
Score = 29.5 bits (63), Expect = 2.6
Identities = 18/59 (30%), Positives = 21/59 (35%), Gaps = 1/59 (1%)
Frame = -1
Query: 651 CG-ISCRGTARSLRNDCDGLPQANQVHVPDVLSVDEYVPGLRFERIGTTSDHCGFFEVH 478
CG IS R D D P N VH PD + PG + T +H H
Sbjct: 539 CGVISTPDIMRCTLTDSDRQPHKNTVHTPDNQPSTFHTPGNHPSNVHTPDNHTKTLSTH 597
>SB_4913| Best HMM Match : CBF (HMM E-Value=2.9)
Length = 328
Score = 29.5 bits (63), Expect = 2.6
Identities = 16/40 (40%), Positives = 25/40 (62%), Gaps = 1/40 (2%)
Frame = +1
Query: 472 RDVNFKK-STMVRRCTDSFEPQSGNIFINGQNIRDVDLVS 588
R V+ KK S V + + SF+ QSG FI G + D++++S
Sbjct: 235 RSVSSKKLSKDVPKLSTSFQEQSGEPFITGYRLIDMEILS 274
>SB_57924| Best HMM Match : PG_binding_1 (HMM E-Value=3.5)
Length = 581
Score = 29.5 bits (63), Expect = 2.6
Identities = 16/40 (40%), Positives = 25/40 (62%), Gaps = 1/40 (2%)
Frame = +1
Query: 472 RDVNFKK-STMVRRCTDSFEPQSGNIFINGQNIRDVDLVS 588
R V+ KK S V + + SF+ QSG FI G + D++++S
Sbjct: 112 RSVSSKKLSKDVPKLSTSFQEQSGEPFITGYRLIDMEILS 151
>SB_3171| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 851
Score = 29.5 bits (63), Expect = 2.6
Identities = 16/40 (40%), Positives = 25/40 (62%), Gaps = 1/40 (2%)
Frame = +1
Query: 472 RDVNFKK-STMVRRCTDSFEPQSGNIFINGQNIRDVDLVS 588
R V+ KK S V + + SF+ QSG FI G + D++++S
Sbjct: 521 RSVSSKKLSKDVPKLSTSFQEQSGEPFITGYRLIDMEILS 560
>SB_25617| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 479
Score = 29.1 bits (62), Expect = 3.5
Identities = 15/51 (29%), Positives = 24/51 (47%)
Frame = +2
Query: 497 QWSDVVPILSNRSPGTYSSTDRTSGTWTWLA*GRPSQSFRRLRAVPRHDIP 649
++S VP +N PGTYS + T W + G Q+ + L + + P
Sbjct: 58 EYSGPVPDPNNSPPGTYSKIGTLNATKLWTSLGNRIQNVQTLSFILENSRP 108
>SB_35301| Best HMM Match : ABC_tran (HMM E-Value=0)
Length = 618
Score = 28.7 bits (61), Expect = 4.6
Identities = 16/43 (37%), Positives = 26/43 (60%)
Frame = +1
Query: 490 KSTMVRRCTDSFEPQSGNIFINGQNIRDVDLVSLRKAIAVVPQ 618
KS+++ EP+ G I I+G NIR + L LR ++++PQ
Sbjct: 75 KSSLLSTLFRLAEPK-GLIDIDGINIRKLGLKDLRSKLSIIPQ 116
>SB_42630| Best HMM Match : Ets (HMM E-Value=0)
Length = 631
Score = 28.3 bits (60), Expect = 6.0
Identities = 13/36 (36%), Positives = 18/36 (50%)
Frame = -1
Query: 342 VHGAQEAERDGQLEQETVHXHQVAHRHATAAISRAA 235
+ E+ +G E T H H+ RH AA+SR A
Sbjct: 189 IRHTSESSLNGGYETRTRHVHEDVSRHVDAAMSRHA 224
>SB_39746| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 639
Score = 28.3 bits (60), Expect = 6.0
Identities = 12/43 (27%), Positives = 22/43 (51%)
Frame = +1
Query: 490 KSTMVRRCTDSFEPQSGNIFINGQNIRDVDLVSLRKAIAVVPQ 618
KST + +EP G + I+ ++D+D L +++V Q
Sbjct: 393 KSTCINLLEHLYEPTGGEVLIDAVPVKDLDHYYLHNKVSLVGQ 435
>SB_37142| Best HMM Match : Peptidase_A22B (HMM E-Value=0)
Length = 1019
Score = 28.3 bits (60), Expect = 6.0
Identities = 15/33 (45%), Positives = 22/33 (66%)
Frame = -2
Query: 470 NSIVAVLLSTIIGGAFCISLIRDCTVMSVNMVC 372
N+ A +L I+G +FCISLIR+ + S+ VC
Sbjct: 166 NASYAWVLQDILGVSFCISLIRNIRLPSLK-VC 197
>SB_34715| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 977
Score = 28.3 bits (60), Expect = 6.0
Identities = 13/36 (36%), Positives = 18/36 (50%)
Frame = -1
Query: 342 VHGAQEAERDGQLEQETVHXHQVAHRHATAAISRAA 235
+ E+ +G E T H H+ RH AA+SR A
Sbjct: 535 IRHTSESSLNGGYETRTRHVHEDVSRHVDAAMSRHA 570
>SB_12510| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 180
Score = 27.9 bits (59), Expect = 8.0
Identities = 15/48 (31%), Positives = 23/48 (47%)
Frame = -1
Query: 603 DGLPQANQVHVPDVLSVDEYVPGLRFERIGTTSDHCGFFEVHVSELYR 460
DG + +H P VL+ Y+ + R G S + + +HV E YR
Sbjct: 100 DGSFRLMYIHRPHVLTQGVYISKTMYMRQGEPSVNAFYRSMHVVEYYR 147
>SB_47984| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 231
Score = 27.9 bits (59), Expect = 8.0
Identities = 13/27 (48%), Positives = 18/27 (66%)
Frame = +2
Query: 104 ELEKYDAXLRQYESASLKTAWSLAALN 184
+LEK D L+ Y+S S+K + SL LN
Sbjct: 21 KLEKLDTDLKNYKSNSIKESISLPMLN 47
>SB_189| Best HMM Match : Peptidase_A17 (HMM E-Value=1.9e-35)
Length = 965
Score = 27.9 bits (59), Expect = 8.0
Identities = 18/51 (35%), Positives = 25/51 (49%), Gaps = 4/51 (7%)
Frame = +3
Query: 435 DDRGQ*DGHDRVQRRELQKIHNGPTL----YRFFRTAVREHIHQRTEHPGR 575
DD+G R++R +L I P L + + VR H HQR +H GR
Sbjct: 445 DDQGLIRVRGRLRRADLGYIERHPVLLPNDHHLSKLIVR-HFHQRVKHQGR 494
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,578,875
Number of Sequences: 59808
Number of extensions: 344080
Number of successful extensions: 1203
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 1104
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1203
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1745338465
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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