Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0363
         (678 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ325133-1|ABD14147.1|  181|Apis mellifera complementary sex det...    25   0.88 
DQ325115-1|ABD14129.1|  185|Apis mellifera complementary sex det...    25   0.88 
DQ325075-1|ABD14089.1|  181|Apis mellifera complementary sex det...    25   0.88 
DQ325074-1|ABD14088.1|  181|Apis mellifera complementary sex det...    25   0.88 
DQ325073-1|ABD14087.1|  181|Apis mellifera complementary sex det...    25   0.88 
DQ325072-1|ABD14086.1|  181|Apis mellifera complementary sex det...    25   0.88 
DQ325071-1|ABD14085.1|  181|Apis mellifera complementary sex det...    25   0.88 
DQ325070-1|ABD14084.1|  181|Apis mellifera complementary sex det...    25   0.88 
DQ325069-1|ABD14083.1|  181|Apis mellifera complementary sex det...    25   0.88 
DQ325068-1|ABD14082.1|  181|Apis mellifera complementary sex det...    25   0.88 
AY569696-1|AAS86649.1|  414|Apis mellifera complementary sex det...    25   0.88 
AY569695-1|AAS86648.1|  414|Apis mellifera complementary sex det...    25   0.88 
X52884-1|CAA37066.1|  461|Apis mellifera elongation factor 1 alp...    21   8.2  

>DQ325133-1|ABD14147.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 24.6 bits (51), Expect = 0.88
 Identities = 14/49 (28%), Positives = 23/49 (46%)
 Frame = +3

Query: 417 DTESSADDRGQ*DGHDRVQRRELQKIHNGPTLYRFFRTAVREHIHQRTE 563
           + E   ++R     + R + RE QK++     YR +R   +E    RTE
Sbjct: 25  EKEKFLEERTSRKRYSRSRERE-QKLYKNKREYRKYRETSKERSRNRTE 72


>DQ325115-1|ABD14129.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 24.6 bits (51), Expect = 0.88
 Identities = 14/49 (28%), Positives = 23/49 (46%)
 Frame = +3

Query: 417 DTESSADDRGQ*DGHDRVQRRELQKIHNGPTLYRFFRTAVREHIHQRTE 563
           + E   ++R     + R + RE QK++     YR +R   +E    RTE
Sbjct: 25  EKEKFLEERTSRKRYSRSRERE-QKLYKNKREYRKYRETSKERSRNRTE 72


>DQ325075-1|ABD14089.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 24.6 bits (51), Expect = 0.88
 Identities = 14/49 (28%), Positives = 23/49 (46%)
 Frame = +3

Query: 417 DTESSADDRGQ*DGHDRVQRRELQKIHNGPTLYRFFRTAVREHIHQRTE 563
           + E   ++R     + R + RE QK++     YR +R   +E    RTE
Sbjct: 25  EKEKFLEERTSRKRYSRSRERE-QKLYKNKREYRKYRETSKERSRNRTE 72


>DQ325074-1|ABD14088.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 24.6 bits (51), Expect = 0.88
 Identities = 14/49 (28%), Positives = 23/49 (46%)
 Frame = +3

Query: 417 DTESSADDRGQ*DGHDRVQRRELQKIHNGPTLYRFFRTAVREHIHQRTE 563
           + E   ++R     + R + RE QK++     YR +R   +E    RTE
Sbjct: 25  EKEKFLEERTSRKRYSRSRERE-QKLYKNKREYRKYRETSKERSRNRTE 72


>DQ325073-1|ABD14087.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 24.6 bits (51), Expect = 0.88
 Identities = 14/49 (28%), Positives = 23/49 (46%)
 Frame = +3

Query: 417 DTESSADDRGQ*DGHDRVQRRELQKIHNGPTLYRFFRTAVREHIHQRTE 563
           + E   ++R     + R + RE QK++     YR +R   +E    RTE
Sbjct: 25  EKEKFLEERTSRKRYSRSRERE-QKLYKNKREYRKYRETSKERSRNRTE 72


>DQ325072-1|ABD14086.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 24.6 bits (51), Expect = 0.88
 Identities = 14/49 (28%), Positives = 23/49 (46%)
 Frame = +3

Query: 417 DTESSADDRGQ*DGHDRVQRRELQKIHNGPTLYRFFRTAVREHIHQRTE 563
           + E   ++R     + R + RE QK++     YR +R   +E    RTE
Sbjct: 25  EKEKFLEERTSRKRYSRSRERE-QKLYKNKREYRKYRETSKERSRNRTE 72


>DQ325071-1|ABD14085.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 24.6 bits (51), Expect = 0.88
 Identities = 14/49 (28%), Positives = 23/49 (46%)
 Frame = +3

Query: 417 DTESSADDRGQ*DGHDRVQRRELQKIHNGPTLYRFFRTAVREHIHQRTE 563
           + E   ++R     + R + RE QK++     YR +R   +E    RTE
Sbjct: 25  EKEKFLEERTSRKRYSRSRERE-QKLYKNKREYRKYRETSKERSRNRTE 72


>DQ325070-1|ABD14084.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 24.6 bits (51), Expect = 0.88
 Identities = 14/49 (28%), Positives = 23/49 (46%)
 Frame = +3

Query: 417 DTESSADDRGQ*DGHDRVQRRELQKIHNGPTLYRFFRTAVREHIHQRTE 563
           + E   ++R     + R + RE QK++     YR +R   +E    RTE
Sbjct: 25  EKEKFLEERTSRKRYSRSRERE-QKLYKNKREYRKYRETSKERSRNRTE 72


>DQ325069-1|ABD14083.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 24.6 bits (51), Expect = 0.88
 Identities = 14/49 (28%), Positives = 23/49 (46%)
 Frame = +3

Query: 417 DTESSADDRGQ*DGHDRVQRRELQKIHNGPTLYRFFRTAVREHIHQRTE 563
           + E   ++R     + R + RE QK++     YR +R   +E    RTE
Sbjct: 25  EKEKFLEERTSRKRYSRSRERE-QKLYKNKREYRKYRETSKERSRNRTE 72


>DQ325068-1|ABD14082.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 24.6 bits (51), Expect = 0.88
 Identities = 14/49 (28%), Positives = 23/49 (46%)
 Frame = +3

Query: 417 DTESSADDRGQ*DGHDRVQRRELQKIHNGPTLYRFFRTAVREHIHQRTE 563
           + E   ++R     + R + RE QK++     YR +R   +E    RTE
Sbjct: 25  EKEKFLEERTSRKRYSRSRERE-QKLYKNKREYRKYRETSKERSRNRTE 72


>AY569696-1|AAS86649.1|  414|Apis mellifera complementary sex
           determiner protein.
          Length = 414

 Score = 24.6 bits (51), Expect = 0.88
 Identities = 14/49 (28%), Positives = 23/49 (46%)
 Frame = +3

Query: 417 DTESSADDRGQ*DGHDRVQRRELQKIHNGPTLYRFFRTAVREHIHQRTE 563
           + E   ++R     + R + RE QK++     YR +R   +E    RTE
Sbjct: 258 EKEKFLEERTSRKRYSRSRERE-QKLYKNKREYRKYRETSKERSRNRTE 305


>AY569695-1|AAS86648.1|  414|Apis mellifera complementary sex
           determiner protein.
          Length = 414

 Score = 24.6 bits (51), Expect = 0.88
 Identities = 14/49 (28%), Positives = 23/49 (46%)
 Frame = +3

Query: 417 DTESSADDRGQ*DGHDRVQRRELQKIHNGPTLYRFFRTAVREHIHQRTE 563
           + E   ++R     + R + RE QK++     YR +R   +E    RTE
Sbjct: 258 EKEKFLEERTSRKRYSRSRERE-QKLYKNKREYRKYRETSKERSRNRTE 305


>X52884-1|CAA37066.1|  461|Apis mellifera elongation factor 1 alpha
           protein.
          Length = 461

 Score = 21.4 bits (43), Expect = 8.2
 Identities = 9/23 (39%), Positives = 14/23 (60%)
 Frame = +2

Query: 20  RAENQAGNTAIDSLINYETVKYF 88
           +AE + G T   +L  +ET KY+
Sbjct: 64  KAERERGITIDIALWKFETAKYY 86


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 153,629
Number of Sequences: 438
Number of extensions: 3058
Number of successful extensions: 31
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 31
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20586735
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)