SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0363
         (678 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At5g58270.1 68418.m07295 mitochondrial half-ABC transporter (STA...   104   2e-25
At4g28630.1 68417.m04093 ABC transporter family protein identica...    96   2e-23
At4g28620.1 68417.m04092 ABC transporter family protein identica...    93   5e-22
At2g36910.1 68415.m04527 multidrug resistance P-glycoprotein (PG...    42   4e-04
At1g27940.1 68414.m03423 multidrug resistance P-glycoprotein, pu...    40   0.001
At1g28010.1 68414.m03430 multidrug resistance P-glycoprotein, pu...    40   0.002
At5g03910.1 68418.m00371 ABC transporter family protein ABC-type...    38   0.005
At1g67940.1 68414.m07758 ABC transporter family protein similar ...    37   0.011
At4g25960.1 68417.m03735 multidrug resistance P-glycoprotein, pu...    36   0.033
At3g13090.1 68416.m01639 ABC transporter, putative similar to MR...    36   0.033
At3g13100.1 68416.m01640 ABC transporter family protein similar ...    35   0.043
At3g13080.1 68416.m01635 ABC transporter family protein almost i...    35   0.043
At3g28380.1 68416.m03546 P-glycoprotein, putative similar to P-g...    34   0.075
At2g47000.1 68415.m05871 multidrug resistant (MDR) ABC transport...    34   0.075
At1g70610.1 68414.m08135 ABC transporter (TAP1) contains Pfam pr...    34   0.075
At3g62150.1 68416.m06983 multidrug resistant (MDR) ABC transport...    34   0.099
At3g21250.1 68416.m02685 ABC transporter family protein similar ...    34   0.099
At3g28860.1 68416.m03602 multidrug resistance P-glycoprotein, pu...    33   0.13 
At1g10680.1 68414.m01214 P-glycoprotein, putative similar to P-g...    33   0.13 
At4g01830.1 68417.m00240 multidrug resistance P-glycoprotein, pu...    33   0.17 
At3g28390.1 68416.m03547 P-glycoprotein, putative similar to P-g...    33   0.17 
At3g28345.1 68416.m03541 ABC transporter family protein similar ...    33   0.17 
At4g25450.1 68417.m03665 ABC transporter family protein similar ...    33   0.23 
At1g02520.1 68414.m00203 multidrug resistance P-glycoprotein, pu...    33   0.23 
At3g60160.1 68416.m06717 ABC transporter family protein similar ...    32   0.40 
At3g42060.1 68416.m04315 myosin heavy chain-related                    32   0.40 
At2g47800.1 68415.m05966 glutathione-conjugate transporter (MRP4...    32   0.40 
At1g04120.1 68414.m00401 ABC transporter family protein Strong s...    32   0.40 
At3g60970.1 68416.m06823 ABC transporter family protein ABC tran...    31   0.53 
At1g02530.1 68414.m00204 multidrug resistance P-glycoprotein, pu...    31   0.53 
At3g62700.1 68416.m07043 glutathione-conjugate transporter, puta...    31   0.70 
At3g28415.1 68416.m03551 P-glycoprotein, putative contains ATP-b...    31   0.70 
At2g07680.1 68415.m00992 ABC transporter family protein                31   0.70 
At3g55320.1 68416.m06144 ABC transporter family protein similar ...    31   0.93 
At2g39480.1 68415.m04845 ABC transporter family protein related ...    31   0.93 
At3g28360.1 68416.m03544 ABC transporter family protein similar ...    30   1.2  
At5g46540.1 68418.m05730 ABC transporter family protein contains...    29   2.8  
At2g34270.1 68415.m04193 hypothetical protein  and genscan             29   2.8  
At4g18050.1 68417.m02686 ABC transporter family protein contains...    29   3.7  
At5g64500.1 68418.m08103 membrane protein-related contains weak ...    28   4.9  
At5g39040.1 68418.m04724 ABC transporter (TAP2) TAP-like ABC tra...    28   4.9  
At3g13080.2 68416.m01636 ABC transporter family protein almost i...    28   6.5  
At2g34660.1 68415.m04258 glutathione S-conjugate ABC transporter...    27   8.6  

>At5g58270.1 68418.m07295 mitochondrial half-ABC transporter (STA1)
           identical to half-molecule ABC transporter ATM3
           GI:9964121 from [Arabidopsis thaliana]; almost identical
           to mitochondrial half-ABC transporter STA1 GI:9187883
           from [Arabidopsis thaliana]; identical to cDNA
           mitochondrial half-ABC transporter (STA1 gene)GI:9187882
          Length = 728

 Score =  104 bits (249), Expect = 6e-23
 Identities = 51/83 (61%), Positives = 61/83 (73%)
 Frame = +2

Query: 2   FRVRMNRAENQAGNTAIDSLINYETVKYFNNERHELEKYDAXLRQYESASLKTAWSLAAL 181
           FR  MN+A+N A   AIDSLINYETVKYFNNE +E EKYD  L++YE A+L+T  SLA L
Sbjct: 327 FRKAMNKADNDASTRAIDSLINYETVKYFNNEGYEAEKYDQFLKKYEDAALQTQRSLAFL 386

Query: 182 NFGQHAIFSAGLSLVMLLAAREI 250
           NFGQ  IFS  LS  M+L ++ I
Sbjct: 387 NFGQSIIFSTALSTAMVLCSQGI 409



 Score = 88.2 bits (209), Expect(2) = 2e-25
 Identities = 45/81 (55%), Positives = 57/81 (70%)
 Frame = +1

Query: 244 GDSRGSMTVGDLVXVNGLLFQLSIPLGFLGSVYREVRQALVDMQTMFTLMTVQSRIKEIQ 423
           G   G MTVGDLV VNGLLFQLS+PL FLGSVYRE  Q+LVDM++MF L+  +S I    
Sbjct: 408 GIMNGQMTVGDLVMVNGLLFQLSLPLNFLGSVYRETIQSLVDMKSMFQLLEEKSDITNTS 467

Query: 424 KAPPMIVDSRTATIEFRDVNF 486
            A P+++  +   IEF +V+F
Sbjct: 468 DAKPLVL--KGGNIEFENVHF 486



 Score = 45.6 bits (103), Expect(2) = 2e-25
 Identities = 23/43 (53%), Positives = 31/43 (72%)
 Frame = +1

Query: 490 KSTMVRRCTDSFEPQSGNIFINGQNIRDVDLVSLRKAIAVVPQ 618
           KST++R     F+  SGNI I+GQ+I++V L SLR +I VVPQ
Sbjct: 518 KSTILRMLFRFFDTDSGNIRIDGQDIKEVRLDSLRSSIGVVPQ 560



 Score = 37.9 bits (84), Expect = 0.006
 Identities = 15/19 (78%), Positives = 17/19 (89%)
 Frame = +3

Query: 618 DCVLFHDTIFHNLHYGDLS 674
           D VLF+DTIFHN+HYG LS
Sbjct: 561 DTVLFNDTIFHNIHYGRLS 579


>At4g28630.1 68417.m04093 ABC transporter family protein identical
           to half-molecule ABC transporter ATM1 GI:9964117 from
           [Arabidopsis thaliana]
          Length = 678

 Score = 96.3 bits (229), Expect = 2e-20
 Identities = 48/83 (57%), Positives = 59/83 (71%)
 Frame = +2

Query: 2   FRVRMNRAENQAGNTAIDSLINYETVKYFNNERHELEKYDAXLRQYESASLKTAWSLAAL 181
           FR  MN+A+N A   AIDSL+NYETVKYFNNE +E  KYD  L +YE A+L+T  SLA L
Sbjct: 282 FRKAMNQADNDASTRAIDSLVNYETVKYFNNEDYEARKYDDLLGRYEDAALQTQKSLAFL 341

Query: 182 NFGQHAIFSAGLSLVMLLAAREI 250
           +FGQ  IFS  LS  M+L ++ I
Sbjct: 342 DFGQSFIFSTALSTSMVLCSQGI 364



 Score = 81.4 bits (192), Expect(2) = 2e-23
 Identities = 45/84 (53%), Positives = 59/84 (70%), Gaps = 3/84 (3%)
 Frame = +1

Query: 244 GDSRGSMTVGDLVXVNGLLFQLSIPLGFLGSVYREVRQALVDMQTMFTLMTVQSRI--KE 417
           G   G MTVGDLV VNGLLFQLS+PL FLG VYRE  Q LVDM+++F L+  +S I  K+
Sbjct: 363 GIMNGEMTVGDLVMVNGLLFQLSLPLYFLGGVYRETVQGLVDMKSLFQLLEERSDIGDKD 422

Query: 418 IQ-KAPPMIVDSRTATIEFRDVNF 486
            + K PP+++  R  +I F +V+F
Sbjct: 423 TETKLPPLVL--RGGSISFENVHF 444



 Score = 45.6 bits (103), Expect(2) = 2e-23
 Identities = 22/43 (51%), Positives = 30/43 (69%)
 Frame = +1

Query: 490 KSTMVRRCTDSFEPQSGNIFINGQNIRDVDLVSLRKAIAVVPQ 618
           KST++R     F+  SGN+ I+GQ+I++V L SLR  I VVPQ
Sbjct: 476 KSTILRMIFRFFDTDSGNVRIDGQDIKEVTLESLRSCIGVVPQ 518



 Score = 39.1 bits (87), Expect = 0.003
 Identities = 15/19 (78%), Positives = 18/19 (94%)
 Frame = +3

Query: 618 DCVLFHDTIFHNLHYGDLS 674
           D VLF+DTIFHN+HYG+LS
Sbjct: 519 DTVLFNDTIFHNIHYGNLS 537


>At4g28620.1 68417.m04092 ABC transporter family protein identical
           to half-molecule ABC transporter ATM2 GI:9964119 from
           [Arabidopsis thaliana]
          Length = 680

 Score = 93.1 bits (221), Expect = 2e-19
 Identities = 47/82 (57%), Positives = 54/82 (65%)
 Frame = +2

Query: 5   RVRMNRAENQAGNTAIDSLINYETVKYFNNERHELEKYDAXLRQYESASLKTAWSLAALN 184
           R  MN AEN A   AIDSLINYETVKYFNNE +E  KYD     YE A+L++  S A LN
Sbjct: 285 RKAMNEAENDASTRAIDSLINYETVKYFNNEDYEARKYDQLHENYEDAALQSRKSFALLN 344

Query: 185 FGQHAIFSAGLSLVMLLAAREI 250
           FGQ  IFS  LS  M+L ++ I
Sbjct: 345 FGQSFIFSTALSTAMVLCSQGI 366



 Score = 77.0 bits (181), Expect(2) = 5e-22
 Identities = 43/84 (51%), Positives = 58/84 (69%), Gaps = 3/84 (3%)
 Frame = +1

Query: 244 GDSRGSMTVGDLVXVNGLLFQLSIPLGFLGSVYREVRQALVDMQTMFTLMTVQSRI--KE 417
           G   G MTVGDLV VNGLLFQLS+PL FLG VY +  Q LVDM++MF  +  +S I  K+
Sbjct: 365 GIMNGQMTVGDLVMVNGLLFQLSLPLYFLGVVYSDTVQGLVDMKSMFKFLEERSDIGDKD 424

Query: 418 I-QKAPPMIVDSRTATIEFRDVNF 486
           I +K PP+++  +  +I F +V+F
Sbjct: 425 IDRKLPPLVL--KGGSISFENVHF 446



 Score = 45.2 bits (102), Expect(2) = 5e-22
 Identities = 22/43 (51%), Positives = 31/43 (72%)
 Frame = +1

Query: 490 KSTMVRRCTDSFEPQSGNIFINGQNIRDVDLVSLRKAIAVVPQ 618
           KST++R     F+  SGN+ I+GQ+I++V L SLR +I VVPQ
Sbjct: 478 KSTILRMIFRFFDVDSGNVKIDGQDIKEVRLESLRSSIGVVPQ 520



 Score = 39.1 bits (87), Expect = 0.003
 Identities = 15/19 (78%), Positives = 18/19 (94%)
 Frame = +3

Query: 618 DCVLFHDTIFHNLHYGDLS 674
           D VLF+DTIFHN+HYG+LS
Sbjct: 521 DTVLFNDTIFHNIHYGNLS 539


>At2g36910.1 68415.m04527 multidrug resistance P-glycoprotein (PGP1)
            identical to P-glycoprotein GI:3849833 from [Arabidopsis
            thaliana]; homologous to mammalian mdr gene,contains
            ATP-binding cassette; related to multi drug resistance
            proteins
          Length = 1286

 Score = 41.9 bits (94), Expect = 4e-04
 Identities = 18/43 (41%), Positives = 30/43 (69%)
 Frame = +1

Query: 490  KSTMVRRCTDSFEPQSGNIFINGQNIRDVDLVSLRKAIAVVPQ 618
            KS+++      +EP SG + I+G++IR  +L ++RK IA+VPQ
Sbjct: 1065 KSSVISLIQRFYEPSSGRVMIDGKDIRKYNLKAIRKHIAIVPQ 1107



 Score = 33.5 bits (73), Expect = 0.13
 Identities = 15/43 (34%), Positives = 27/43 (62%)
 Frame = +1

Query: 490 KSTMVRRCTDSFEPQSGNIFINGQNIRDVDLVSLRKAIAVVPQ 618
           KST+V      ++P SG + ++GQ+++ + L  LR+ I +V Q
Sbjct: 409 KSTVVSLIERFYDPNSGQVLLDGQDLKTLKLRWLRQQIGLVSQ 451


>At1g27940.1 68414.m03423 multidrug resistance P-glycoprotein,
            putative similar to mdr-like P-glycoprotein atpgp1
            GI:3849833 from [Arabidopsis thaliana]
          Length = 1245

 Score = 40.3 bits (90), Expect = 0.001
 Identities = 18/43 (41%), Positives = 31/43 (72%)
 Frame = +1

Query: 490  KSTMVRRCTDSFEPQSGNIFINGQNIRDVDLVSLRKAIAVVPQ 618
            KST++      ++P +GN+ I+GQ+I+ ++L SLRK +A+V Q
Sbjct: 1045 KSTVIGLIMRFYDPSNGNLCIDGQDIKTLNLRSLRKKLALVQQ 1087



 Score = 32.3 bits (70), Expect = 0.30
 Identities = 14/43 (32%), Positives = 25/43 (58%)
 Frame = +1

Query: 490 KSTMVRRCTDSFEPQSGNIFINGQNIRDVDLVSLRKAIAVVPQ 618
           KST++      +EP SG I ++G +I+ + L   R+ + +V Q
Sbjct: 412 KSTIISMVQRFYEPNSGEILLDGNDIKSLKLKWFREQLGLVSQ 454


>At1g28010.1 68414.m03430 multidrug resistance P-glycoprotein,
            putative similar to mdr-like P-glycoprotein GI:3849833
            from [Arabidopsis thaliana]
          Length = 1247

 Score = 39.9 bits (89), Expect = 0.002
 Identities = 18/43 (41%), Positives = 30/43 (69%)
 Frame = +1

Query: 490  KSTMVRRCTDSFEPQSGNIFINGQNIRDVDLVSLRKAIAVVPQ 618
            KST++      ++P +GN+ I+G +I+ V+L SLRK +A+V Q
Sbjct: 1047 KSTVIGLIMRFYDPSNGNLCIDGHDIKSVNLRSLRKKLALVQQ 1089



 Score = 34.3 bits (75), Expect = 0.075
 Identities = 15/43 (34%), Positives = 28/43 (65%)
 Frame = +1

Query: 490 KSTMVRRCTDSFEPQSGNIFINGQNIRDVDLVSLRKAIAVVPQ 618
           KST++      +EP+SG I ++G +I+++ L  LR+ + +V Q
Sbjct: 413 KSTIISMVQRFYEPRSGEILLDGNDIKNLKLKWLREQMGLVSQ 455


>At5g03910.1 68418.m00371 ABC transporter family protein ABC-type
           transport protein sll1276, Synechocystis sp., PIR:S77239
          Length = 634

 Score = 38.3 bits (85), Expect = 0.005
 Identities = 17/43 (39%), Positives = 29/43 (67%)
 Frame = +1

Query: 490 KSTMVRRCTDSFEPQSGNIFINGQNIRDVDLVSLRKAIAVVPQ 618
           K+T+++     +EP SG+I I+  +I+D+ L SLRK + +V Q
Sbjct: 436 KTTLIKLLLRLYEPSSGSIIIDKIDIKDIKLESLRKHVGLVSQ 478


>At1g67940.1 68414.m07758 ABC transporter family protein similar to
           ABC transporters: GB:BAA77876 [Escherichia coli],
           GB:P07655 [Escherichia coli]; contains Pfam profile:
           PF00005 ABC transporter
          Length = 263

 Score = 37.1 bits (82), Expect = 0.011
 Identities = 14/43 (32%), Positives = 29/43 (67%)
 Frame = +1

Query: 490 KSTMVRRCTDSFEPQSGNIFINGQNIRDVDLVSLRKAIAVVPQ 618
           KST +R     +EP    +F++G++I +VD+++LR+ + ++ Q
Sbjct: 68  KSTFLRSLNRLWEPPESTVFLDGEDITNVDVIALRRRVGMLFQ 110


>At4g25960.1 68417.m03735 multidrug resistance P-glycoprotein,
            putative similar to multidrug resistant P-glycoprotein
            GI:4204793 from [Solanum tuberosum]
          Length = 1233

 Score = 35.5 bits (78), Expect = 0.033
 Identities = 15/43 (34%), Positives = 28/43 (65%)
 Frame = +1

Query: 490  KSTMVRRCTDSFEPQSGNIFINGQNIRDVDLVSLRKAIAVVPQ 618
            KS+++      ++P +G + I G++I+ +DL +LRK I +V Q
Sbjct: 1031 KSSVISLILRFYDPTAGKVMIEGKDIKKLDLKALRKHIGLVQQ 1073



 Score = 33.9 bits (74), Expect = 0.099
 Identities = 16/43 (37%), Positives = 26/43 (60%)
 Frame = +1

Query: 490 KSTMVRRCTDSFEPQSGNIFINGQNIRDVDLVSLRKAIAVVPQ 618
           KST++      +EP SG + ++G NI ++D+  LR  I +V Q
Sbjct: 402 KSTVISLIERFYEPISGAVLLDGNNISELDIKWLRGQIGLVNQ 444


>At3g13090.1 68416.m01639 ABC transporter, putative similar to
            MRP-like ABC transporter [Arabidopsis thaliana]
            GI:2316016; contains Pfam profile: PF00005 ABC
            transporter
          Length = 1466

 Score = 35.5 bits (78), Expect = 0.033
 Identities = 16/43 (37%), Positives = 26/43 (60%)
 Frame = +1

Query: 490  KSTMVRRCTDSFEPQSGNIFINGQNIRDVDLVSLRKAIAVVPQ 618
            KST+++      EP +G I I+G NI  + L  LR  ++++PQ
Sbjct: 1259 KSTLIQTLFRIVEPAAGEIRIDGINILSIGLHDLRSRLSIIPQ 1301


>At3g13100.1 68416.m01640 ABC transporter family protein similar to
            ATP-binding cassette transporter MRP8 GI:18031899 from
            [Arabidopsis thaliana]; contains Pfam profile: PF00005
            ABC transporter
          Length = 1493

 Score = 35.1 bits (77), Expect = 0.043
 Identities = 16/43 (37%), Positives = 26/43 (60%)
 Frame = +1

Query: 490  KSTMVRRCTDSFEPQSGNIFINGQNIRDVDLVSLRKAIAVVPQ 618
            KST+++      EP +G I I+G NI  + L  LR  ++++PQ
Sbjct: 1281 KSTLIQTLFRIVEPAAGEIRIDGINILTIGLHDLRSRLSIIPQ 1323


>At3g13080.1 68416.m01635 ABC transporter family protein almost
            identical to MRP-like ABC transporter GI:2316016 from
            [Arabidopsis thaliana]; contains Pfam profile: PF00005
            ABC transporter
          Length = 1514

 Score = 35.1 bits (77), Expect = 0.043
 Identities = 16/43 (37%), Positives = 26/43 (60%)
 Frame = +1

Query: 490  KSTMVRRCTDSFEPQSGNIFINGQNIRDVDLVSLRKAIAVVPQ 618
            KST+++      EP +G I I+G NI  + L  LR  ++++PQ
Sbjct: 1309 KSTLIQTLFRIVEPSAGEIRIDGVNILTIGLHDLRLRLSIIPQ 1351


>At3g28380.1 68416.m03546 P-glycoprotein, putative similar to
            P-glycoprotein homologue GI:2292907 from [Hordeum vulgare
            subsp. vulgare]
          Length = 1240

 Score = 34.3 bits (75), Expect = 0.075
 Identities = 17/43 (39%), Positives = 27/43 (62%)
 Frame = +1

Query: 490  KSTMVRRCTDSFEPQSGNIFINGQNIRDVDLVSLRKAIAVVPQ 618
            KST++      ++P  G + I+G++IR   L SLRK I++V Q
Sbjct: 1036 KSTIIGLIERFYDPLKGTVKIDGRDIRSYHLRSLRKYISLVSQ 1078


>At2g47000.1 68415.m05871 multidrug resistant (MDR) ABC transporter,
           putative similar to multidrug-resistant protein CjMDR1
           [Coptis japonica] GI:14715462, MDR-like p-glycoprotein
           [Arabidopsis thaliana] GI:24324262; contains Pfam
           profiles PF00005: ABC transporter, PF00664: ABC
           transporter transmembrane region
          Length = 1286

 Score = 34.3 bits (75), Expect = 0.075
 Identities = 15/43 (34%), Positives = 27/43 (62%)
 Frame = +1

Query: 490 KSTMVRRCTDSFEPQSGNIFINGQNIRDVDLVSLRKAIAVVPQ 618
           KST+V      ++PQ+G++ I+G N+++  L  +R  I +V Q
Sbjct: 425 KSTVVSLIERFYDPQAGDVLIDGINLKEFQLKWIRSKIGLVSQ 467



 Score = 28.7 bits (61), Expect = 3.7
 Identities = 14/43 (32%), Positives = 24/43 (55%)
 Frame = +1

Query: 490  KSTMVRRCTDSFEPQSGNIFINGQNIRDVDLVSLRKAIAVVPQ 618
            KST++      ++P SG I ++G  I+ + L  LR+   +V Q
Sbjct: 1083 KSTVIALLQRFYDPDSGEITLDGVEIKSLRLKWLRQQTGLVSQ 1125


>At1g70610.1 68414.m08135 ABC transporter (TAP1) contains Pfam
           profile: PF00005 ABC transporters; similar to TAP1
           protein (transporter of processed antigen) GB:AAD53033
           (Oncorhynchus mykiss); identical to cDNA transporter
           associated with antigen processing-like protein (TAP1)
           GI:19335721
          Length = 700

 Score = 34.3 bits (75), Expect = 0.075
 Identities = 16/43 (37%), Positives = 26/43 (60%)
 Frame = +1

Query: 490 KSTMVRRCTDSFEPQSGNIFINGQNIRDVDLVSLRKAIAVVPQ 618
           KST+V      +EP SG I ++G  ++++D+  LR+ I  V Q
Sbjct: 496 KSTLVNLLLQLYEPTSGQILLDGVPLKELDVKWLRQRIGYVGQ 538


>At3g62150.1 68416.m06983 multidrug resistant (MDR) ABC transporter,
           putative similar to multidrug-resistant protein CjMDR1
           GI:14715462 from [Coptis japonica]; contains Pfam
           profiles PF00005: ABC transporter, PF00664: ABC
           transporter transmembrane region
          Length = 1292

 Score = 33.9 bits (74), Expect = 0.099
 Identities = 16/43 (37%), Positives = 26/43 (60%)
 Frame = +1

Query: 490 KSTMVRRCTDSFEPQSGNIFINGQNIRDVDLVSLRKAIAVVPQ 618
           KST+V      ++PQSG + I+G N+++  L  +R  I +V Q
Sbjct: 444 KSTVVSLIERFYDPQSGEVRIDGINLKEFQLKWIRSKIGLVSQ 486



 Score = 29.1 bits (62), Expect = 2.8
 Identities = 14/43 (32%), Positives = 24/43 (55%)
 Frame = +1

Query: 490  KSTMVRRCTDSFEPQSGNIFINGQNIRDVDLVSLRKAIAVVPQ 618
            KST++      ++P SG I ++G  I+ + L  LR+   +V Q
Sbjct: 1089 KSTVIALLQRFYDPDSGQITLDGVEIKTLQLKWLRQQTGLVSQ 1131


>At3g21250.1 68416.m02685 ABC transporter family protein similar to
            MRP-like ABC transporter GB:AAC49791 from [Arabidopsis
            thaliana]
          Length = 1294

 Score = 33.9 bits (74), Expect = 0.099
 Identities = 16/43 (37%), Positives = 25/43 (58%)
 Frame = +1

Query: 490  KSTMVRRCTDSFEPQSGNIFINGQNIRDVDLVSLRKAIAVVPQ 618
            KST++       EP SG I I+G +I  + L  LR  ++++PQ
Sbjct: 1085 KSTLISALFRLVEPASGCILIDGIDISKIGLKDLRMKLSIIPQ 1127


>At3g28860.1 68416.m03602 multidrug resistance P-glycoprotein,
            putative similar to mdr-like P-glycoprotein GI:3849833
            from [Arabidopsis thaliana]; contains Pfam profiles
            PF00005: ABC transporter and PF00664: ABC transporter
            transmembrane region; identical to cDNA MDR-like
            p-glycoprotein (At3g28860) GI:24324261
          Length = 1252

 Score = 33.5 bits (73), Expect = 0.13
 Identities = 15/43 (34%), Positives = 28/43 (65%)
 Frame = +1

Query: 490  KSTMVRRCTDSFEPQSGNIFINGQNIRDVDLVSLRKAIAVVPQ 618
            KS+++      ++P +G + I+G++IR ++L SLR  I +V Q
Sbjct: 1051 KSSVIAMIERFYDPLAGKVMIDGKDIRRLNLKSLRLKIGLVQQ 1093



 Score = 32.3 bits (70), Expect = 0.30
 Identities = 16/43 (37%), Positives = 25/43 (58%)
 Frame = +1

Query: 490 KSTMVRRCTDSFEPQSGNIFINGQNIRDVDLVSLRKAIAVVPQ 618
           KST+V      ++P SG I ++G  I+ + L  LR+ I +V Q
Sbjct: 406 KSTVVSLIERFYDPNSGQILLDGVEIKTLQLKFLREQIGLVNQ 448


>At1g10680.1 68414.m01214 P-glycoprotein, putative similar to
           P-glycoprotein GI:4204793 from [Solanum tuberosum]
          Length = 1227

 Score = 33.5 bits (73), Expect = 0.13
 Identities = 17/43 (39%), Positives = 25/43 (58%)
 Frame = +1

Query: 490 KSTMVRRCTDSFEPQSGNIFINGQNIRDVDLVSLRKAIAVVPQ 618
           KSTM+      +EP  G + ++G +IR +DL  LR  I +V Q
Sbjct: 402 KSTMISLIERFYEPTDGAVMLDGNDIRYLDLKWLRGHIGLVNQ 444



 Score = 33.1 bits (72), Expect = 0.17
 Identities = 16/43 (37%), Positives = 28/43 (65%)
 Frame = +1

Query: 490  KSTMVRRCTDSFEPQSGNIFINGQNIRDVDLVSLRKAIAVVPQ 618
            KS+++      ++P +G I I+GQ+I+ + L SLR+ I +V Q
Sbjct: 1023 KSSVLSLVLRFYDPTAGIIMIDGQDIKKLKLKSLRRHIGLVQQ 1065


>At4g01830.1 68417.m00240 multidrug resistance P-glycoprotein,
           putative similar to multidrug resistant P-glycoprotein
           GI:4204793 from [Solanum tuberosum]
          Length = 1230

 Score = 33.1 bits (72), Expect = 0.17
 Identities = 16/61 (26%), Positives = 32/61 (52%)
 Frame = +1

Query: 436 MIVDSRTATIEFRDVNFKKSTMVRRCTDSFEPQSGNIFINGQNIRDVDLVSLRKAIAVVP 615
           +++ S T T    +    KST++      ++P SG + I+G ++++  L  +R  I +V 
Sbjct: 376 LLIPSGTTTALVGESGSGKSTVISLIERFYDPNSGQVLIDGVDLKEFQLKWIRGKIGLVS 435

Query: 616 Q 618
           Q
Sbjct: 436 Q 436



 Score = 28.3 bits (60), Expect = 4.9
 Identities = 13/43 (30%), Positives = 26/43 (60%)
 Frame = +1

Query: 490  KSTMVRRCTDSFEPQSGNIFINGQNIRDVDLVSLRKAIAVVPQ 618
            KST++      ++P SG+I ++G  ++ + L  LR+ + +V Q
Sbjct: 1026 KSTVISLLQRFYDPDSGHITLDGVELKKLRLKWLRQQMGLVGQ 1068


>At3g28390.1 68416.m03547 P-glycoprotein, putative similar to
            P-glycoprotein homologue GI:2292907 from [Hordeum vulgare
            subsp. vulgare]
          Length = 1225

 Score = 33.1 bits (72), Expect = 0.17
 Identities = 17/43 (39%), Positives = 27/43 (62%)
 Frame = +1

Query: 490  KSTMVRRCTDSFEPQSGNIFINGQNIRDVDLVSLRKAIAVVPQ 618
            KST++      ++P  G + I+G++IR   L SLR+ IA+V Q
Sbjct: 1021 KSTIISLIERFYDPLKGIVKIDGRDIRSCHLRSLRQHIALVSQ 1063


>At3g28345.1 68416.m03541 ABC transporter family protein similar to
            P-glycoprotein [Arabidopsis thaliana] GI:3849833;
            contains Pfam profiles PF00005: ABC transporter, PF00664:
            ABC transporter transmembrane region
          Length = 1240

 Score = 33.1 bits (72), Expect = 0.17
 Identities = 17/43 (39%), Positives = 27/43 (62%)
 Frame = +1

Query: 490  KSTMVRRCTDSFEPQSGNIFINGQNIRDVDLVSLRKAIAVVPQ 618
            KST++      ++P  G + I+G++IR   L SLR+ IA+V Q
Sbjct: 1036 KSTIIGLIERFYDPLKGIVKIDGRDIRSYHLRSLRRHIALVSQ 1078


>At4g25450.1 68417.m03665 ABC transporter family protein similar to
           multidrug resistance protein 2 SP:P21440 from [Mus
           musculus]
          Length = 714

 Score = 32.7 bits (71), Expect = 0.23
 Identities = 17/61 (27%), Positives = 30/61 (49%)
 Frame = +1

Query: 436 MIVDSRTATIEFRDVNFKKSTMVRRCTDSFEPQSGNIFINGQNIRDVDLVSLRKAIAVVP 615
           + ++S T T         KST+V+     +EP  G I + G+++R  D     K +++V 
Sbjct: 493 LTLNSGTVTALVGSSGAGKSTIVQLLARFYEPTQGRITVGGEDVRMFDKSEWAKVVSIVN 552

Query: 616 Q 618
           Q
Sbjct: 553 Q 553


>At1g02520.1 68414.m00203 multidrug resistance P-glycoprotein,
           putative similar to multidrug-resistant protein CjMDR1
           GI:14715462 from [Coptis japonica]
          Length = 1278

 Score = 32.7 bits (71), Expect = 0.23
 Identities = 14/43 (32%), Positives = 26/43 (60%)
 Frame = +1

Query: 490 KSTMVRRCTDSFEPQSGNIFINGQNIRDVDLVSLRKAIAVVPQ 618
           KST++      ++P+SG + I+G N+++  L  +R  I +V Q
Sbjct: 422 KSTVISLIERFYDPKSGAVLIDGVNLKEFQLKWIRSKIGLVSQ 464



 Score = 29.1 bits (62), Expect = 2.8
 Identities = 13/43 (30%), Positives = 26/43 (60%)
 Frame = +1

Query: 490  KSTMVRRCTDSFEPQSGNIFINGQNIRDVDLVSLRKAIAVVPQ 618
            KST++      ++P SG+I ++G  ++ + L  LR+ + +V Q
Sbjct: 1073 KSTVISLLQRFYDPDSGHITLDGVELKKLQLKWLRQQMGLVGQ 1115


>At3g60160.1 68416.m06717 ABC transporter family protein similar to
            ATP-binding cassette transporter MRP8 GI:18031899 from
            [Arabidopsis thaliana]
          Length = 1490

 Score = 31.9 bits (69), Expect = 0.40
 Identities = 14/43 (32%), Positives = 23/43 (53%)
 Frame = +1

Query: 490  KSTMVRRCTDSFEPQSGNIFINGQNIRDVDLVSLRKAIAVVPQ 618
            KST+++      EP  G I I+  +I  + L  LR  + ++PQ
Sbjct: 1279 KSTLIQALFRIVEPSQGTIVIDNVDITKIGLHDLRSRLGIIPQ 1321


>At3g42060.1 68416.m04315 myosin heavy chain-related
          Length = 712

 Score = 31.9 bits (69), Expect = 0.40
 Identities = 19/65 (29%), Positives = 30/65 (46%)
 Frame = -1

Query: 648 GISCRGTARSLRNDCDGLPQANQVHVPDVLSVDEYVPGLRFERIGTTSDHCGFFEVHVSE 469
           G +C    R++R D    PQ   +  PD+      V   +F+ +  T+   GF+E  V E
Sbjct: 512 GSACAELGRNVRGDFSEFPQVETLLAPDLY---RDVCRQKFQEMSQTNRMVGFYEKKVRE 568

Query: 468 LYRGR 454
           + R R
Sbjct: 569 VMRER 573


>At2g47800.1 68415.m05966 glutathione-conjugate transporter (MRP4)
            identical to AtMRP4 GI:2959767 from [Arabidopsis
            thaliana]
          Length = 1516

 Score = 31.9 bits (69), Expect = 0.40
 Identities = 15/43 (34%), Positives = 23/43 (53%)
 Frame = +1

Query: 490  KSTMVRRCTDSFEPQSGNIFINGQNIRDVDLVSLRKAIAVVPQ 618
            KST+++      EP  G I I+G +I  + L  LR    ++PQ
Sbjct: 1314 KSTLIQVLFRLVEPSGGKIIIDGIDISTLGLHDLRSRFGIIPQ 1356


>At1g04120.1 68414.m00401 ABC transporter family protein Strong
            similarity to MRP-like ABC transporter gb|U92650 from A.
            thaliana and canalicular multi-drug resistance protein
            gb|L49379 from Rattus norvegicus
          Length = 1514

 Score = 31.9 bits (69), Expect = 0.40
 Identities = 14/43 (32%), Positives = 24/43 (55%)
 Frame = +1

Query: 490  KSTMVRRCTDSFEPQSGNIFINGQNIRDVDLVSLRKAIAVVPQ 618
            KST+++      EP +G I I+  +I  + L  LR  + ++PQ
Sbjct: 1308 KSTLIQALFRLIEPTAGKITIDNIDISQIGLHDLRSRLGIIPQ 1350


>At3g60970.1 68416.m06823 ABC transporter family protein ABC
           transporter-like proteins
          Length = 1037

 Score = 31.5 bits (68), Expect = 0.53
 Identities = 14/43 (32%), Positives = 23/43 (53%)
 Frame = +1

Query: 490 KSTMVRRCTDSFEPQSGNIFINGQNIRDVDLVSLRKAIAVVPQ 618
           KST+++      EP  G I I+  +I  + L  LR  + ++PQ
Sbjct: 826 KSTLIQALFRIVEPSHGTIVIDNVDITKIGLHDLRSRLGIIPQ 868


>At1g02530.1 68414.m00204 multidrug resistance P-glycoprotein,
           putative similar to multidrug-resistant protein CjMDR1
           GI:14715462 from [Coptis japonica]
          Length = 1273

 Score = 31.5 bits (68), Expect = 0.53
 Identities = 13/43 (30%), Positives = 26/43 (60%)
 Frame = +1

Query: 490 KSTMVRRCTDSFEPQSGNIFINGQNIRDVDLVSLRKAIAVVPQ 618
           KST++      ++P++G + I+G N+++  L  +R  I +V Q
Sbjct: 409 KSTVINLIERFYDPKAGEVLIDGINLKEFQLKWIRSKIGLVCQ 451



 Score = 28.7 bits (61), Expect = 3.7
 Identities = 13/43 (30%), Positives = 25/43 (58%)
 Frame = +1

Query: 490  KSTMVRRCTDSFEPQSGNIFINGQNIRDVDLVSLRKAIAVVPQ 618
            KST++      ++P SG I ++G  ++ + L  LR+ + +V Q
Sbjct: 1068 KSTVISLLQRFYDPDSGQITLDGVELKKLQLKWLRQQMGLVGQ 1110


>At3g62700.1 68416.m07043 glutathione-conjugate transporter, putative
            similar to glutathione-conjugate transporter AtMRP4
            GI:2959767 from [Arabidopsis thaliana]
          Length = 1539

 Score = 31.1 bits (67), Expect = 0.70
 Identities = 15/43 (34%), Positives = 23/43 (53%)
 Frame = +1

Query: 490  KSTMVRRCTDSFEPQSGNIFINGQNIRDVDLVSLRKAIAVVPQ 618
            KST+++      EP  G I I+G +I  + L  LR    ++PQ
Sbjct: 1337 KSTLIQVLFRLVEPSGGKIIIDGIDICTLGLHDLRSRFGIIPQ 1379


>At3g28415.1 68416.m03551 P-glycoprotein, putative contains
            ATP-binding cassette; related to multi drug resistance
            proteins
          Length = 1221

 Score = 31.1 bits (67), Expect = 0.70
 Identities = 16/43 (37%), Positives = 26/43 (60%)
 Frame = +1

Query: 490  KSTMVRRCTDSFEPQSGNIFINGQNIRDVDLVSLRKAIAVVPQ 618
            KST++      ++P  G + I+G++IR   L SLR+ I +V Q
Sbjct: 1017 KSTIIGLIERFYDPLKGIVKIDGRDIRSYHLRSLRQHIGLVSQ 1059


>At2g07680.1 68415.m00992 ABC transporter family protein 
          Length = 1194

 Score = 31.1 bits (67), Expect = 0.70
 Identities = 13/28 (46%), Positives = 19/28 (67%)
 Frame = +1

Query: 535  SGNIFINGQNIRDVDLVSLRKAIAVVPQ 618
            SG I ++G+NI  + +  LR  +AVVPQ
Sbjct: 1013 SGEILVDGKNISHLPIRELRSCLAVVPQ 1040


>At3g55320.1 68416.m06144 ABC transporter family protein similar to
           multidrug resistant P-glycoprotein pmdr1 GI:4204793 from
           [Solanum tuberosum]
          Length = 1408

 Score = 30.7 bits (66), Expect = 0.93
 Identities = 13/43 (30%), Positives = 26/43 (60%)
 Frame = +1

Query: 490 KSTMVRRCTDSFEPQSGNIFINGQNIRDVDLVSLRKAIAVVPQ 618
           KS+++      ++P  G + ++G+NI+++ L  LR  I +V Q
Sbjct: 455 KSSIIPLMERFYDPTLGEVLLDGENIKNLKLEWLRSQIGLVTQ 497


>At2g39480.1 68415.m04845 ABC transporter family protein related to
           multi drug resistance proteins and P-glycoproteins
          Length = 1407

 Score = 30.7 bits (66), Expect = 0.93
 Identities = 13/43 (30%), Positives = 26/43 (60%)
 Frame = +1

Query: 490 KSTMVRRCTDSFEPQSGNIFINGQNIRDVDLVSLRKAIAVVPQ 618
           KS+++      ++P  G + ++G+NI+++ L  LR  I +V Q
Sbjct: 453 KSSIIPLMERFYDPTLGEVLLDGENIKNLKLEWLRSQIGLVTQ 495



 Score = 27.5 bits (58), Expect = 8.6
 Identities = 10/43 (23%), Positives = 26/43 (60%)
 Frame = +1

Query: 490  KSTMVRRCTDSFEPQSGNIFINGQNIRDVDLVSLRKAIAVVPQ 618
            KST++      ++P +G + ++G++++  +L  LR  + ++ Q
Sbjct: 1199 KSTIISLIERYYDPVAGQVLLDGRDLKSYNLRWLRSHMGLIQQ 1241


>At3g28360.1 68416.m03544 ABC transporter family protein similar to
            P-glycoprotein homologue GI:2292907 from [Hordeum vulgare
            subsp. vulgare]
          Length = 1158

 Score = 30.3 bits (65), Expect = 1.2
 Identities = 15/43 (34%), Positives = 27/43 (62%)
 Frame = +1

Query: 490  KSTMVRRCTDSFEPQSGNIFINGQNIRDVDLVSLRKAIAVVPQ 618
            KST++      ++P  G + I+G++IR   L SLR+ +++V Q
Sbjct: 952  KSTVIGLIERFYDPLQGIVKIDGRDIRSYHLRSLRQHMSLVSQ 994


>At5g46540.1 68418.m05730 ABC transporter family protein contains
           Pfam profile: PF00005 ABC transporter; similar to
           multidrug-resistant protein CjMDR1 GI:14715462 from
           [Coptis japonica]
          Length = 1248

 Score = 29.1 bits (62), Expect = 2.8
 Identities = 12/43 (27%), Positives = 25/43 (58%)
 Frame = +1

Query: 490 KSTMVRRCTDSFEPQSGNIFINGQNIRDVDLVSLRKAIAVVPQ 618
           KST++      ++P+SG + I+G +++   +  +R  I +V Q
Sbjct: 398 KSTVISLIERFYDPESGEVLIDGIDLKKFQVKWIRSKIGLVSQ 440


>At2g34270.1 68415.m04193 hypothetical protein  and genscan
          Length = 374

 Score = 29.1 bits (62), Expect = 2.8
 Identities = 16/41 (39%), Positives = 26/41 (63%)
 Frame = -2

Query: 557 PLMNMFPDCGSKESVQRRTIVDFLKFTSLNSIVAVLLSTII 435
           PLMN+F D   K  ++R  +  FLK T+  S++++ +ST I
Sbjct: 24  PLMNIFDD--FKSQIEREIMTIFLK-TAYESLLSIAISTEI 61


>At4g18050.1 68417.m02686 ABC transporter family protein contains
           Pfam profile: PF00005 ABC transporter; similar to
           multidrug-resistant protein CjMDR1 GI:14715462 from
           [Coptis japonica]
          Length = 1281

 Score = 28.7 bits (61), Expect = 3.7
 Identities = 12/43 (27%), Positives = 25/43 (58%)
 Frame = +1

Query: 490 KSTMVRRCTDSFEPQSGNIFINGQNIRDVDLVSLRKAIAVVPQ 618
           KST++      ++P+SG + I+  +++ + L  +R  I +V Q
Sbjct: 396 KSTVISLIERFYDPESGQVLIDNIDLKKLQLKWIRSKIGLVSQ 438


>At5g64500.1 68418.m08103 membrane protein-related contains weak
           similarity to spinster type IV (GI:12003976) [Drosophila
           melanogaster]
          Length = 484

 Score = 28.3 bits (60), Expect = 4.9
 Identities = 12/40 (30%), Positives = 21/40 (52%)
 Frame = -2

Query: 533 CGSKESVQRRTIVDFLKFTSLNSIVAVLLSTIIGGAFCIS 414
           CG   ++    I+D++  T  N+   + +ST IG  FC +
Sbjct: 319 CGIVGTLSGGVILDYMDATISNAFKVLSVSTFIGAIFCFA 358


>At5g39040.1 68418.m04724 ABC transporter (TAP2) TAP-like ABC
           transporter, Rattus norvegicus, EMBL:AB027520; identical
           to cDNA transporter associated with antigen
           processing-like protein (TAP2); GI:19335723
          Length = 644

 Score = 28.3 bits (60), Expect = 4.9
 Identities = 12/43 (27%), Positives = 23/43 (53%)
 Frame = +1

Query: 490 KSTMVRRCTDSFEPQSGNIFINGQNIRDVDLVSLRKAIAVVPQ 618
           K+T+       ++P  G I +NG ++ ++    L K I++V Q
Sbjct: 437 KTTIANLIERFYDPLKGKILLNGVSLMEISHQYLHKQISIVSQ 479


>At3g13080.2 68416.m01636 ABC transporter family protein almost
            identical to MRP-like ABC transporter GI:2316016 from
            [Arabidopsis thaliana]; contains Pfam profile: PF00005
            ABC transporter
          Length = 1489

 Score = 27.9 bits (59), Expect = 6.5
 Identities = 14/35 (40%), Positives = 20/35 (57%)
 Frame = +1

Query: 490  KSTMVRRCTDSFEPQSGNIFINGQNIRDVDLVSLR 594
            KST+++      EP +G I I+G NI  + L  LR
Sbjct: 1309 KSTLIQTLFRIVEPSAGEIRIDGVNILTIGLHDLR 1343


>At2g34660.1 68415.m04258 glutathione S-conjugate ABC transporter
            (MRP2) almost identical to MgATP-energized glutathione
            S-conjugate pump GI:2909781 from [Arabidopsis thaliana]
          Length = 1623

 Score = 27.5 bits (58), Expect = 8.6
 Identities = 12/43 (27%), Positives = 23/43 (53%)
 Frame = +1

Query: 490  KSTMVRRCTDSFEPQSGNIFINGQNIRDVDLVSLRKAIAVVPQ 618
            KS+++       E + G I I+  ++    L+ LRK + ++PQ
Sbjct: 1282 KSSLLNALFRIVEVEKGRILIDDCDVGKFGLMDLRKVLGIIPQ 1324


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,989,105
Number of Sequences: 28952
Number of extensions: 224447
Number of successful extensions: 913
Number of sequences better than 10.0: 43
Number of HSP's better than 10.0 without gapping: 847
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 913
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1428369392
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

- SilkBase 1999-2023 -