BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= e40h0363 (678 letters) Database: arabidopsis 28,952 sequences; 12,070,560 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value At5g58270.1 68418.m07295 mitochondrial half-ABC transporter (STA... 104 2e-25 At4g28630.1 68417.m04093 ABC transporter family protein identica... 96 2e-23 At4g28620.1 68417.m04092 ABC transporter family protein identica... 93 5e-22 At2g36910.1 68415.m04527 multidrug resistance P-glycoprotein (PG... 42 4e-04 At1g27940.1 68414.m03423 multidrug resistance P-glycoprotein, pu... 40 0.001 At1g28010.1 68414.m03430 multidrug resistance P-glycoprotein, pu... 40 0.002 At5g03910.1 68418.m00371 ABC transporter family protein ABC-type... 38 0.005 At1g67940.1 68414.m07758 ABC transporter family protein similar ... 37 0.011 At4g25960.1 68417.m03735 multidrug resistance P-glycoprotein, pu... 36 0.033 At3g13090.1 68416.m01639 ABC transporter, putative similar to MR... 36 0.033 At3g13100.1 68416.m01640 ABC transporter family protein similar ... 35 0.043 At3g13080.1 68416.m01635 ABC transporter family protein almost i... 35 0.043 At3g28380.1 68416.m03546 P-glycoprotein, putative similar to P-g... 34 0.075 At2g47000.1 68415.m05871 multidrug resistant (MDR) ABC transport... 34 0.075 At1g70610.1 68414.m08135 ABC transporter (TAP1) contains Pfam pr... 34 0.075 At3g62150.1 68416.m06983 multidrug resistant (MDR) ABC transport... 34 0.099 At3g21250.1 68416.m02685 ABC transporter family protein similar ... 34 0.099 At3g28860.1 68416.m03602 multidrug resistance P-glycoprotein, pu... 33 0.13 At1g10680.1 68414.m01214 P-glycoprotein, putative similar to P-g... 33 0.13 At4g01830.1 68417.m00240 multidrug resistance P-glycoprotein, pu... 33 0.17 At3g28390.1 68416.m03547 P-glycoprotein, putative similar to P-g... 33 0.17 At3g28345.1 68416.m03541 ABC transporter family protein similar ... 33 0.17 At4g25450.1 68417.m03665 ABC transporter family protein similar ... 33 0.23 At1g02520.1 68414.m00203 multidrug resistance P-glycoprotein, pu... 33 0.23 At3g60160.1 68416.m06717 ABC transporter family protein similar ... 32 0.40 At3g42060.1 68416.m04315 myosin heavy chain-related 32 0.40 At2g47800.1 68415.m05966 glutathione-conjugate transporter (MRP4... 32 0.40 At1g04120.1 68414.m00401 ABC transporter family protein Strong s... 32 0.40 At3g60970.1 68416.m06823 ABC transporter family protein ABC tran... 31 0.53 At1g02530.1 68414.m00204 multidrug resistance P-glycoprotein, pu... 31 0.53 At3g62700.1 68416.m07043 glutathione-conjugate transporter, puta... 31 0.70 At3g28415.1 68416.m03551 P-glycoprotein, putative contains ATP-b... 31 0.70 At2g07680.1 68415.m00992 ABC transporter family protein 31 0.70 At3g55320.1 68416.m06144 ABC transporter family protein similar ... 31 0.93 At2g39480.1 68415.m04845 ABC transporter family protein related ... 31 0.93 At3g28360.1 68416.m03544 ABC transporter family protein similar ... 30 1.2 At5g46540.1 68418.m05730 ABC transporter family protein contains... 29 2.8 At2g34270.1 68415.m04193 hypothetical protein and genscan 29 2.8 At4g18050.1 68417.m02686 ABC transporter family protein contains... 29 3.7 At5g64500.1 68418.m08103 membrane protein-related contains weak ... 28 4.9 At5g39040.1 68418.m04724 ABC transporter (TAP2) TAP-like ABC tra... 28 4.9 At3g13080.2 68416.m01636 ABC transporter family protein almost i... 28 6.5 At2g34660.1 68415.m04258 glutathione S-conjugate ABC transporter... 27 8.6 >At5g58270.1 68418.m07295 mitochondrial half-ABC transporter (STA1) identical to half-molecule ABC transporter ATM3 GI:9964121 from [Arabidopsis thaliana]; almost identical to mitochondrial half-ABC transporter STA1 GI:9187883 from [Arabidopsis thaliana]; identical to cDNA mitochondrial half-ABC transporter (STA1 gene)GI:9187882 Length = 728 Score = 104 bits (249), Expect = 6e-23 Identities = 51/83 (61%), Positives = 61/83 (73%) Frame = +2 Query: 2 FRVRMNRAENQAGNTAIDSLINYETVKYFNNERHELEKYDAXLRQYESASLKTAWSLAAL 181 FR MN+A+N A AIDSLINYETVKYFNNE +E EKYD L++YE A+L+T SLA L Sbjct: 327 FRKAMNKADNDASTRAIDSLINYETVKYFNNEGYEAEKYDQFLKKYEDAALQTQRSLAFL 386 Query: 182 NFGQHAIFSAGLSLVMLLAAREI 250 NFGQ IFS LS M+L ++ I Sbjct: 387 NFGQSIIFSTALSTAMVLCSQGI 409 Score = 88.2 bits (209), Expect(2) = 2e-25 Identities = 45/81 (55%), Positives = 57/81 (70%) Frame = +1 Query: 244 GDSRGSMTVGDLVXVNGLLFQLSIPLGFLGSVYREVRQALVDMQTMFTLMTVQSRIKEIQ 423 G G MTVGDLV VNGLLFQLS+PL FLGSVYRE Q+LVDM++MF L+ +S I Sbjct: 408 GIMNGQMTVGDLVMVNGLLFQLSLPLNFLGSVYRETIQSLVDMKSMFQLLEEKSDITNTS 467 Query: 424 KAPPMIVDSRTATIEFRDVNF 486 A P+++ + IEF +V+F Sbjct: 468 DAKPLVL--KGGNIEFENVHF 486 Score = 45.6 bits (103), Expect(2) = 2e-25 Identities = 23/43 (53%), Positives = 31/43 (72%) Frame = +1 Query: 490 KSTMVRRCTDSFEPQSGNIFINGQNIRDVDLVSLRKAIAVVPQ 618 KST++R F+ SGNI I+GQ+I++V L SLR +I VVPQ Sbjct: 518 KSTILRMLFRFFDTDSGNIRIDGQDIKEVRLDSLRSSIGVVPQ 560 Score = 37.9 bits (84), Expect = 0.006 Identities = 15/19 (78%), Positives = 17/19 (89%) Frame = +3 Query: 618 DCVLFHDTIFHNLHYGDLS 674 D VLF+DTIFHN+HYG LS Sbjct: 561 DTVLFNDTIFHNIHYGRLS 579 >At4g28630.1 68417.m04093 ABC transporter family protein identical to half-molecule ABC transporter ATM1 GI:9964117 from [Arabidopsis thaliana] Length = 678 Score = 96.3 bits (229), Expect = 2e-20 Identities = 48/83 (57%), Positives = 59/83 (71%) Frame = +2 Query: 2 FRVRMNRAENQAGNTAIDSLINYETVKYFNNERHELEKYDAXLRQYESASLKTAWSLAAL 181 FR MN+A+N A AIDSL+NYETVKYFNNE +E KYD L +YE A+L+T SLA L Sbjct: 282 FRKAMNQADNDASTRAIDSLVNYETVKYFNNEDYEARKYDDLLGRYEDAALQTQKSLAFL 341 Query: 182 NFGQHAIFSAGLSLVMLLAAREI 250 +FGQ IFS LS M+L ++ I Sbjct: 342 DFGQSFIFSTALSTSMVLCSQGI 364 Score = 81.4 bits (192), Expect(2) = 2e-23 Identities = 45/84 (53%), Positives = 59/84 (70%), Gaps = 3/84 (3%) Frame = +1 Query: 244 GDSRGSMTVGDLVXVNGLLFQLSIPLGFLGSVYREVRQALVDMQTMFTLMTVQSRI--KE 417 G G MTVGDLV VNGLLFQLS+PL FLG VYRE Q LVDM+++F L+ +S I K+ Sbjct: 363 GIMNGEMTVGDLVMVNGLLFQLSLPLYFLGGVYRETVQGLVDMKSLFQLLEERSDIGDKD 422 Query: 418 IQ-KAPPMIVDSRTATIEFRDVNF 486 + K PP+++ R +I F +V+F Sbjct: 423 TETKLPPLVL--RGGSISFENVHF 444 Score = 45.6 bits (103), Expect(2) = 2e-23 Identities = 22/43 (51%), Positives = 30/43 (69%) Frame = +1 Query: 490 KSTMVRRCTDSFEPQSGNIFINGQNIRDVDLVSLRKAIAVVPQ 618 KST++R F+ SGN+ I+GQ+I++V L SLR I VVPQ Sbjct: 476 KSTILRMIFRFFDTDSGNVRIDGQDIKEVTLESLRSCIGVVPQ 518 Score = 39.1 bits (87), Expect = 0.003 Identities = 15/19 (78%), Positives = 18/19 (94%) Frame = +3 Query: 618 DCVLFHDTIFHNLHYGDLS 674 D VLF+DTIFHN+HYG+LS Sbjct: 519 DTVLFNDTIFHNIHYGNLS 537 >At4g28620.1 68417.m04092 ABC transporter family protein identical to half-molecule ABC transporter ATM2 GI:9964119 from [Arabidopsis thaliana] Length = 680 Score = 93.1 bits (221), Expect = 2e-19 Identities = 47/82 (57%), Positives = 54/82 (65%) Frame = +2 Query: 5 RVRMNRAENQAGNTAIDSLINYETVKYFNNERHELEKYDAXLRQYESASLKTAWSLAALN 184 R MN AEN A AIDSLINYETVKYFNNE +E KYD YE A+L++ S A LN Sbjct: 285 RKAMNEAENDASTRAIDSLINYETVKYFNNEDYEARKYDQLHENYEDAALQSRKSFALLN 344 Query: 185 FGQHAIFSAGLSLVMLLAAREI 250 FGQ IFS LS M+L ++ I Sbjct: 345 FGQSFIFSTALSTAMVLCSQGI 366 Score = 77.0 bits (181), Expect(2) = 5e-22 Identities = 43/84 (51%), Positives = 58/84 (69%), Gaps = 3/84 (3%) Frame = +1 Query: 244 GDSRGSMTVGDLVXVNGLLFQLSIPLGFLGSVYREVRQALVDMQTMFTLMTVQSRI--KE 417 G G MTVGDLV VNGLLFQLS+PL FLG VY + Q LVDM++MF + +S I K+ Sbjct: 365 GIMNGQMTVGDLVMVNGLLFQLSLPLYFLGVVYSDTVQGLVDMKSMFKFLEERSDIGDKD 424 Query: 418 I-QKAPPMIVDSRTATIEFRDVNF 486 I +K PP+++ + +I F +V+F Sbjct: 425 IDRKLPPLVL--KGGSISFENVHF 446 Score = 45.2 bits (102), Expect(2) = 5e-22 Identities = 22/43 (51%), Positives = 31/43 (72%) Frame = +1 Query: 490 KSTMVRRCTDSFEPQSGNIFINGQNIRDVDLVSLRKAIAVVPQ 618 KST++R F+ SGN+ I+GQ+I++V L SLR +I VVPQ Sbjct: 478 KSTILRMIFRFFDVDSGNVKIDGQDIKEVRLESLRSSIGVVPQ 520 Score = 39.1 bits (87), Expect = 0.003 Identities = 15/19 (78%), Positives = 18/19 (94%) Frame = +3 Query: 618 DCVLFHDTIFHNLHYGDLS 674 D VLF+DTIFHN+HYG+LS Sbjct: 521 DTVLFNDTIFHNIHYGNLS 539 >At2g36910.1 68415.m04527 multidrug resistance P-glycoprotein (PGP1) identical to P-glycoprotein GI:3849833 from [Arabidopsis thaliana]; homologous to mammalian mdr gene,contains ATP-binding cassette; related to multi drug resistance proteins Length = 1286 Score = 41.9 bits (94), Expect = 4e-04 Identities = 18/43 (41%), Positives = 30/43 (69%) Frame = +1 Query: 490 KSTMVRRCTDSFEPQSGNIFINGQNIRDVDLVSLRKAIAVVPQ 618 KS+++ +EP SG + I+G++IR +L ++RK IA+VPQ Sbjct: 1065 KSSVISLIQRFYEPSSGRVMIDGKDIRKYNLKAIRKHIAIVPQ 1107 Score = 33.5 bits (73), Expect = 0.13 Identities = 15/43 (34%), Positives = 27/43 (62%) Frame = +1 Query: 490 KSTMVRRCTDSFEPQSGNIFINGQNIRDVDLVSLRKAIAVVPQ 618 KST+V ++P SG + ++GQ+++ + L LR+ I +V Q Sbjct: 409 KSTVVSLIERFYDPNSGQVLLDGQDLKTLKLRWLRQQIGLVSQ 451 >At1g27940.1 68414.m03423 multidrug resistance P-glycoprotein, putative similar to mdr-like P-glycoprotein atpgp1 GI:3849833 from [Arabidopsis thaliana] Length = 1245 Score = 40.3 bits (90), Expect = 0.001 Identities = 18/43 (41%), Positives = 31/43 (72%) Frame = +1 Query: 490 KSTMVRRCTDSFEPQSGNIFINGQNIRDVDLVSLRKAIAVVPQ 618 KST++ ++P +GN+ I+GQ+I+ ++L SLRK +A+V Q Sbjct: 1045 KSTVIGLIMRFYDPSNGNLCIDGQDIKTLNLRSLRKKLALVQQ 1087 Score = 32.3 bits (70), Expect = 0.30 Identities = 14/43 (32%), Positives = 25/43 (58%) Frame = +1 Query: 490 KSTMVRRCTDSFEPQSGNIFINGQNIRDVDLVSLRKAIAVVPQ 618 KST++ +EP SG I ++G +I+ + L R+ + +V Q Sbjct: 412 KSTIISMVQRFYEPNSGEILLDGNDIKSLKLKWFREQLGLVSQ 454 >At1g28010.1 68414.m03430 multidrug resistance P-glycoprotein, putative similar to mdr-like P-glycoprotein GI:3849833 from [Arabidopsis thaliana] Length = 1247 Score = 39.9 bits (89), Expect = 0.002 Identities = 18/43 (41%), Positives = 30/43 (69%) Frame = +1 Query: 490 KSTMVRRCTDSFEPQSGNIFINGQNIRDVDLVSLRKAIAVVPQ 618 KST++ ++P +GN+ I+G +I+ V+L SLRK +A+V Q Sbjct: 1047 KSTVIGLIMRFYDPSNGNLCIDGHDIKSVNLRSLRKKLALVQQ 1089 Score = 34.3 bits (75), Expect = 0.075 Identities = 15/43 (34%), Positives = 28/43 (65%) Frame = +1 Query: 490 KSTMVRRCTDSFEPQSGNIFINGQNIRDVDLVSLRKAIAVVPQ 618 KST++ +EP+SG I ++G +I+++ L LR+ + +V Q Sbjct: 413 KSTIISMVQRFYEPRSGEILLDGNDIKNLKLKWLREQMGLVSQ 455 >At5g03910.1 68418.m00371 ABC transporter family protein ABC-type transport protein sll1276, Synechocystis sp., PIR:S77239 Length = 634 Score = 38.3 bits (85), Expect = 0.005 Identities = 17/43 (39%), Positives = 29/43 (67%) Frame = +1 Query: 490 KSTMVRRCTDSFEPQSGNIFINGQNIRDVDLVSLRKAIAVVPQ 618 K+T+++ +EP SG+I I+ +I+D+ L SLRK + +V Q Sbjct: 436 KTTLIKLLLRLYEPSSGSIIIDKIDIKDIKLESLRKHVGLVSQ 478 >At1g67940.1 68414.m07758 ABC transporter family protein similar to ABC transporters: GB:BAA77876 [Escherichia coli], GB:P07655 [Escherichia coli]; contains Pfam profile: PF00005 ABC transporter Length = 263 Score = 37.1 bits (82), Expect = 0.011 Identities = 14/43 (32%), Positives = 29/43 (67%) Frame = +1 Query: 490 KSTMVRRCTDSFEPQSGNIFINGQNIRDVDLVSLRKAIAVVPQ 618 KST +R +EP +F++G++I +VD+++LR+ + ++ Q Sbjct: 68 KSTFLRSLNRLWEPPESTVFLDGEDITNVDVIALRRRVGMLFQ 110 >At4g25960.1 68417.m03735 multidrug resistance P-glycoprotein, putative similar to multidrug resistant P-glycoprotein GI:4204793 from [Solanum tuberosum] Length = 1233 Score = 35.5 bits (78), Expect = 0.033 Identities = 15/43 (34%), Positives = 28/43 (65%) Frame = +1 Query: 490 KSTMVRRCTDSFEPQSGNIFINGQNIRDVDLVSLRKAIAVVPQ 618 KS+++ ++P +G + I G++I+ +DL +LRK I +V Q Sbjct: 1031 KSSVISLILRFYDPTAGKVMIEGKDIKKLDLKALRKHIGLVQQ 1073 Score = 33.9 bits (74), Expect = 0.099 Identities = 16/43 (37%), Positives = 26/43 (60%) Frame = +1 Query: 490 KSTMVRRCTDSFEPQSGNIFINGQNIRDVDLVSLRKAIAVVPQ 618 KST++ +EP SG + ++G NI ++D+ LR I +V Q Sbjct: 402 KSTVISLIERFYEPISGAVLLDGNNISELDIKWLRGQIGLVNQ 444 >At3g13090.1 68416.m01639 ABC transporter, putative similar to MRP-like ABC transporter [Arabidopsis thaliana] GI:2316016; contains Pfam profile: PF00005 ABC transporter Length = 1466 Score = 35.5 bits (78), Expect = 0.033 Identities = 16/43 (37%), Positives = 26/43 (60%) Frame = +1 Query: 490 KSTMVRRCTDSFEPQSGNIFINGQNIRDVDLVSLRKAIAVVPQ 618 KST+++ EP +G I I+G NI + L LR ++++PQ Sbjct: 1259 KSTLIQTLFRIVEPAAGEIRIDGINILSIGLHDLRSRLSIIPQ 1301 >At3g13100.1 68416.m01640 ABC transporter family protein similar to ATP-binding cassette transporter MRP8 GI:18031899 from [Arabidopsis thaliana]; contains Pfam profile: PF00005 ABC transporter Length = 1493 Score = 35.1 bits (77), Expect = 0.043 Identities = 16/43 (37%), Positives = 26/43 (60%) Frame = +1 Query: 490 KSTMVRRCTDSFEPQSGNIFINGQNIRDVDLVSLRKAIAVVPQ 618 KST+++ EP +G I I+G NI + L LR ++++PQ Sbjct: 1281 KSTLIQTLFRIVEPAAGEIRIDGINILTIGLHDLRSRLSIIPQ 1323 >At3g13080.1 68416.m01635 ABC transporter family protein almost identical to MRP-like ABC transporter GI:2316016 from [Arabidopsis thaliana]; contains Pfam profile: PF00005 ABC transporter Length = 1514 Score = 35.1 bits (77), Expect = 0.043 Identities = 16/43 (37%), Positives = 26/43 (60%) Frame = +1 Query: 490 KSTMVRRCTDSFEPQSGNIFINGQNIRDVDLVSLRKAIAVVPQ 618 KST+++ EP +G I I+G NI + L LR ++++PQ Sbjct: 1309 KSTLIQTLFRIVEPSAGEIRIDGVNILTIGLHDLRLRLSIIPQ 1351 >At3g28380.1 68416.m03546 P-glycoprotein, putative similar to P-glycoprotein homologue GI:2292907 from [Hordeum vulgare subsp. vulgare] Length = 1240 Score = 34.3 bits (75), Expect = 0.075 Identities = 17/43 (39%), Positives = 27/43 (62%) Frame = +1 Query: 490 KSTMVRRCTDSFEPQSGNIFINGQNIRDVDLVSLRKAIAVVPQ 618 KST++ ++P G + I+G++IR L SLRK I++V Q Sbjct: 1036 KSTIIGLIERFYDPLKGTVKIDGRDIRSYHLRSLRKYISLVSQ 1078 >At2g47000.1 68415.m05871 multidrug resistant (MDR) ABC transporter, putative similar to multidrug-resistant protein CjMDR1 [Coptis japonica] GI:14715462, MDR-like p-glycoprotein [Arabidopsis thaliana] GI:24324262; contains Pfam profiles PF00005: ABC transporter, PF00664: ABC transporter transmembrane region Length = 1286 Score = 34.3 bits (75), Expect = 0.075 Identities = 15/43 (34%), Positives = 27/43 (62%) Frame = +1 Query: 490 KSTMVRRCTDSFEPQSGNIFINGQNIRDVDLVSLRKAIAVVPQ 618 KST+V ++PQ+G++ I+G N+++ L +R I +V Q Sbjct: 425 KSTVVSLIERFYDPQAGDVLIDGINLKEFQLKWIRSKIGLVSQ 467 Score = 28.7 bits (61), Expect = 3.7 Identities = 14/43 (32%), Positives = 24/43 (55%) Frame = +1 Query: 490 KSTMVRRCTDSFEPQSGNIFINGQNIRDVDLVSLRKAIAVVPQ 618 KST++ ++P SG I ++G I+ + L LR+ +V Q Sbjct: 1083 KSTVIALLQRFYDPDSGEITLDGVEIKSLRLKWLRQQTGLVSQ 1125 >At1g70610.1 68414.m08135 ABC transporter (TAP1) contains Pfam profile: PF00005 ABC transporters; similar to TAP1 protein (transporter of processed antigen) GB:AAD53033 (Oncorhynchus mykiss); identical to cDNA transporter associated with antigen processing-like protein (TAP1) GI:19335721 Length = 700 Score = 34.3 bits (75), Expect = 0.075 Identities = 16/43 (37%), Positives = 26/43 (60%) Frame = +1 Query: 490 KSTMVRRCTDSFEPQSGNIFINGQNIRDVDLVSLRKAIAVVPQ 618 KST+V +EP SG I ++G ++++D+ LR+ I V Q Sbjct: 496 KSTLVNLLLQLYEPTSGQILLDGVPLKELDVKWLRQRIGYVGQ 538 >At3g62150.1 68416.m06983 multidrug resistant (MDR) ABC transporter, putative similar to multidrug-resistant protein CjMDR1 GI:14715462 from [Coptis japonica]; contains Pfam profiles PF00005: ABC transporter, PF00664: ABC transporter transmembrane region Length = 1292 Score = 33.9 bits (74), Expect = 0.099 Identities = 16/43 (37%), Positives = 26/43 (60%) Frame = +1 Query: 490 KSTMVRRCTDSFEPQSGNIFINGQNIRDVDLVSLRKAIAVVPQ 618 KST+V ++PQSG + I+G N+++ L +R I +V Q Sbjct: 444 KSTVVSLIERFYDPQSGEVRIDGINLKEFQLKWIRSKIGLVSQ 486 Score = 29.1 bits (62), Expect = 2.8 Identities = 14/43 (32%), Positives = 24/43 (55%) Frame = +1 Query: 490 KSTMVRRCTDSFEPQSGNIFINGQNIRDVDLVSLRKAIAVVPQ 618 KST++ ++P SG I ++G I+ + L LR+ +V Q Sbjct: 1089 KSTVIALLQRFYDPDSGQITLDGVEIKTLQLKWLRQQTGLVSQ 1131 >At3g21250.1 68416.m02685 ABC transporter family protein similar to MRP-like ABC transporter GB:AAC49791 from [Arabidopsis thaliana] Length = 1294 Score = 33.9 bits (74), Expect = 0.099 Identities = 16/43 (37%), Positives = 25/43 (58%) Frame = +1 Query: 490 KSTMVRRCTDSFEPQSGNIFINGQNIRDVDLVSLRKAIAVVPQ 618 KST++ EP SG I I+G +I + L LR ++++PQ Sbjct: 1085 KSTLISALFRLVEPASGCILIDGIDISKIGLKDLRMKLSIIPQ 1127 >At3g28860.1 68416.m03602 multidrug resistance P-glycoprotein, putative similar to mdr-like P-glycoprotein GI:3849833 from [Arabidopsis thaliana]; contains Pfam profiles PF00005: ABC transporter and PF00664: ABC transporter transmembrane region; identical to cDNA MDR-like p-glycoprotein (At3g28860) GI:24324261 Length = 1252 Score = 33.5 bits (73), Expect = 0.13 Identities = 15/43 (34%), Positives = 28/43 (65%) Frame = +1 Query: 490 KSTMVRRCTDSFEPQSGNIFINGQNIRDVDLVSLRKAIAVVPQ 618 KS+++ ++P +G + I+G++IR ++L SLR I +V Q Sbjct: 1051 KSSVIAMIERFYDPLAGKVMIDGKDIRRLNLKSLRLKIGLVQQ 1093 Score = 32.3 bits (70), Expect = 0.30 Identities = 16/43 (37%), Positives = 25/43 (58%) Frame = +1 Query: 490 KSTMVRRCTDSFEPQSGNIFINGQNIRDVDLVSLRKAIAVVPQ 618 KST+V ++P SG I ++G I+ + L LR+ I +V Q Sbjct: 406 KSTVVSLIERFYDPNSGQILLDGVEIKTLQLKFLREQIGLVNQ 448 >At1g10680.1 68414.m01214 P-glycoprotein, putative similar to P-glycoprotein GI:4204793 from [Solanum tuberosum] Length = 1227 Score = 33.5 bits (73), Expect = 0.13 Identities = 17/43 (39%), Positives = 25/43 (58%) Frame = +1 Query: 490 KSTMVRRCTDSFEPQSGNIFINGQNIRDVDLVSLRKAIAVVPQ 618 KSTM+ +EP G + ++G +IR +DL LR I +V Q Sbjct: 402 KSTMISLIERFYEPTDGAVMLDGNDIRYLDLKWLRGHIGLVNQ 444 Score = 33.1 bits (72), Expect = 0.17 Identities = 16/43 (37%), Positives = 28/43 (65%) Frame = +1 Query: 490 KSTMVRRCTDSFEPQSGNIFINGQNIRDVDLVSLRKAIAVVPQ 618 KS+++ ++P +G I I+GQ+I+ + L SLR+ I +V Q Sbjct: 1023 KSSVLSLVLRFYDPTAGIIMIDGQDIKKLKLKSLRRHIGLVQQ 1065 >At4g01830.1 68417.m00240 multidrug resistance P-glycoprotein, putative similar to multidrug resistant P-glycoprotein GI:4204793 from [Solanum tuberosum] Length = 1230 Score = 33.1 bits (72), Expect = 0.17 Identities = 16/61 (26%), Positives = 32/61 (52%) Frame = +1 Query: 436 MIVDSRTATIEFRDVNFKKSTMVRRCTDSFEPQSGNIFINGQNIRDVDLVSLRKAIAVVP 615 +++ S T T + KST++ ++P SG + I+G ++++ L +R I +V Sbjct: 376 LLIPSGTTTALVGESGSGKSTVISLIERFYDPNSGQVLIDGVDLKEFQLKWIRGKIGLVS 435 Query: 616 Q 618 Q Sbjct: 436 Q 436 Score = 28.3 bits (60), Expect = 4.9 Identities = 13/43 (30%), Positives = 26/43 (60%) Frame = +1 Query: 490 KSTMVRRCTDSFEPQSGNIFINGQNIRDVDLVSLRKAIAVVPQ 618 KST++ ++P SG+I ++G ++ + L LR+ + +V Q Sbjct: 1026 KSTVISLLQRFYDPDSGHITLDGVELKKLRLKWLRQQMGLVGQ 1068 >At3g28390.1 68416.m03547 P-glycoprotein, putative similar to P-glycoprotein homologue GI:2292907 from [Hordeum vulgare subsp. vulgare] Length = 1225 Score = 33.1 bits (72), Expect = 0.17 Identities = 17/43 (39%), Positives = 27/43 (62%) Frame = +1 Query: 490 KSTMVRRCTDSFEPQSGNIFINGQNIRDVDLVSLRKAIAVVPQ 618 KST++ ++P G + I+G++IR L SLR+ IA+V Q Sbjct: 1021 KSTIISLIERFYDPLKGIVKIDGRDIRSCHLRSLRQHIALVSQ 1063 >At3g28345.1 68416.m03541 ABC transporter family protein similar to P-glycoprotein [Arabidopsis thaliana] GI:3849833; contains Pfam profiles PF00005: ABC transporter, PF00664: ABC transporter transmembrane region Length = 1240 Score = 33.1 bits (72), Expect = 0.17 Identities = 17/43 (39%), Positives = 27/43 (62%) Frame = +1 Query: 490 KSTMVRRCTDSFEPQSGNIFINGQNIRDVDLVSLRKAIAVVPQ 618 KST++ ++P G + I+G++IR L SLR+ IA+V Q Sbjct: 1036 KSTIIGLIERFYDPLKGIVKIDGRDIRSYHLRSLRRHIALVSQ 1078 >At4g25450.1 68417.m03665 ABC transporter family protein similar to multidrug resistance protein 2 SP:P21440 from [Mus musculus] Length = 714 Score = 32.7 bits (71), Expect = 0.23 Identities = 17/61 (27%), Positives = 30/61 (49%) Frame = +1 Query: 436 MIVDSRTATIEFRDVNFKKSTMVRRCTDSFEPQSGNIFINGQNIRDVDLVSLRKAIAVVP 615 + ++S T T KST+V+ +EP G I + G+++R D K +++V Sbjct: 493 LTLNSGTVTALVGSSGAGKSTIVQLLARFYEPTQGRITVGGEDVRMFDKSEWAKVVSIVN 552 Query: 616 Q 618 Q Sbjct: 553 Q 553 >At1g02520.1 68414.m00203 multidrug resistance P-glycoprotein, putative similar to multidrug-resistant protein CjMDR1 GI:14715462 from [Coptis japonica] Length = 1278 Score = 32.7 bits (71), Expect = 0.23 Identities = 14/43 (32%), Positives = 26/43 (60%) Frame = +1 Query: 490 KSTMVRRCTDSFEPQSGNIFINGQNIRDVDLVSLRKAIAVVPQ 618 KST++ ++P+SG + I+G N+++ L +R I +V Q Sbjct: 422 KSTVISLIERFYDPKSGAVLIDGVNLKEFQLKWIRSKIGLVSQ 464 Score = 29.1 bits (62), Expect = 2.8 Identities = 13/43 (30%), Positives = 26/43 (60%) Frame = +1 Query: 490 KSTMVRRCTDSFEPQSGNIFINGQNIRDVDLVSLRKAIAVVPQ 618 KST++ ++P SG+I ++G ++ + L LR+ + +V Q Sbjct: 1073 KSTVISLLQRFYDPDSGHITLDGVELKKLQLKWLRQQMGLVGQ 1115 >At3g60160.1 68416.m06717 ABC transporter family protein similar to ATP-binding cassette transporter MRP8 GI:18031899 from [Arabidopsis thaliana] Length = 1490 Score = 31.9 bits (69), Expect = 0.40 Identities = 14/43 (32%), Positives = 23/43 (53%) Frame = +1 Query: 490 KSTMVRRCTDSFEPQSGNIFINGQNIRDVDLVSLRKAIAVVPQ 618 KST+++ EP G I I+ +I + L LR + ++PQ Sbjct: 1279 KSTLIQALFRIVEPSQGTIVIDNVDITKIGLHDLRSRLGIIPQ 1321 >At3g42060.1 68416.m04315 myosin heavy chain-related Length = 712 Score = 31.9 bits (69), Expect = 0.40 Identities = 19/65 (29%), Positives = 30/65 (46%) Frame = -1 Query: 648 GISCRGTARSLRNDCDGLPQANQVHVPDVLSVDEYVPGLRFERIGTTSDHCGFFEVHVSE 469 G +C R++R D PQ + PD+ V +F+ + T+ GF+E V E Sbjct: 512 GSACAELGRNVRGDFSEFPQVETLLAPDLY---RDVCRQKFQEMSQTNRMVGFYEKKVRE 568 Query: 468 LYRGR 454 + R R Sbjct: 569 VMRER 573 >At2g47800.1 68415.m05966 glutathione-conjugate transporter (MRP4) identical to AtMRP4 GI:2959767 from [Arabidopsis thaliana] Length = 1516 Score = 31.9 bits (69), Expect = 0.40 Identities = 15/43 (34%), Positives = 23/43 (53%) Frame = +1 Query: 490 KSTMVRRCTDSFEPQSGNIFINGQNIRDVDLVSLRKAIAVVPQ 618 KST+++ EP G I I+G +I + L LR ++PQ Sbjct: 1314 KSTLIQVLFRLVEPSGGKIIIDGIDISTLGLHDLRSRFGIIPQ 1356 >At1g04120.1 68414.m00401 ABC transporter family protein Strong similarity to MRP-like ABC transporter gb|U92650 from A. thaliana and canalicular multi-drug resistance protein gb|L49379 from Rattus norvegicus Length = 1514 Score = 31.9 bits (69), Expect = 0.40 Identities = 14/43 (32%), Positives = 24/43 (55%) Frame = +1 Query: 490 KSTMVRRCTDSFEPQSGNIFINGQNIRDVDLVSLRKAIAVVPQ 618 KST+++ EP +G I I+ +I + L LR + ++PQ Sbjct: 1308 KSTLIQALFRLIEPTAGKITIDNIDISQIGLHDLRSRLGIIPQ 1350 >At3g60970.1 68416.m06823 ABC transporter family protein ABC transporter-like proteins Length = 1037 Score = 31.5 bits (68), Expect = 0.53 Identities = 14/43 (32%), Positives = 23/43 (53%) Frame = +1 Query: 490 KSTMVRRCTDSFEPQSGNIFINGQNIRDVDLVSLRKAIAVVPQ 618 KST+++ EP G I I+ +I + L LR + ++PQ Sbjct: 826 KSTLIQALFRIVEPSHGTIVIDNVDITKIGLHDLRSRLGIIPQ 868 >At1g02530.1 68414.m00204 multidrug resistance P-glycoprotein, putative similar to multidrug-resistant protein CjMDR1 GI:14715462 from [Coptis japonica] Length = 1273 Score = 31.5 bits (68), Expect = 0.53 Identities = 13/43 (30%), Positives = 26/43 (60%) Frame = +1 Query: 490 KSTMVRRCTDSFEPQSGNIFINGQNIRDVDLVSLRKAIAVVPQ 618 KST++ ++P++G + I+G N+++ L +R I +V Q Sbjct: 409 KSTVINLIERFYDPKAGEVLIDGINLKEFQLKWIRSKIGLVCQ 451 Score = 28.7 bits (61), Expect = 3.7 Identities = 13/43 (30%), Positives = 25/43 (58%) Frame = +1 Query: 490 KSTMVRRCTDSFEPQSGNIFINGQNIRDVDLVSLRKAIAVVPQ 618 KST++ ++P SG I ++G ++ + L LR+ + +V Q Sbjct: 1068 KSTVISLLQRFYDPDSGQITLDGVELKKLQLKWLRQQMGLVGQ 1110 >At3g62700.1 68416.m07043 glutathione-conjugate transporter, putative similar to glutathione-conjugate transporter AtMRP4 GI:2959767 from [Arabidopsis thaliana] Length = 1539 Score = 31.1 bits (67), Expect = 0.70 Identities = 15/43 (34%), Positives = 23/43 (53%) Frame = +1 Query: 490 KSTMVRRCTDSFEPQSGNIFINGQNIRDVDLVSLRKAIAVVPQ 618 KST+++ EP G I I+G +I + L LR ++PQ Sbjct: 1337 KSTLIQVLFRLVEPSGGKIIIDGIDICTLGLHDLRSRFGIIPQ 1379 >At3g28415.1 68416.m03551 P-glycoprotein, putative contains ATP-binding cassette; related to multi drug resistance proteins Length = 1221 Score = 31.1 bits (67), Expect = 0.70 Identities = 16/43 (37%), Positives = 26/43 (60%) Frame = +1 Query: 490 KSTMVRRCTDSFEPQSGNIFINGQNIRDVDLVSLRKAIAVVPQ 618 KST++ ++P G + I+G++IR L SLR+ I +V Q Sbjct: 1017 KSTIIGLIERFYDPLKGIVKIDGRDIRSYHLRSLRQHIGLVSQ 1059 >At2g07680.1 68415.m00992 ABC transporter family protein Length = 1194 Score = 31.1 bits (67), Expect = 0.70 Identities = 13/28 (46%), Positives = 19/28 (67%) Frame = +1 Query: 535 SGNIFINGQNIRDVDLVSLRKAIAVVPQ 618 SG I ++G+NI + + LR +AVVPQ Sbjct: 1013 SGEILVDGKNISHLPIRELRSCLAVVPQ 1040 >At3g55320.1 68416.m06144 ABC transporter family protein similar to multidrug resistant P-glycoprotein pmdr1 GI:4204793 from [Solanum tuberosum] Length = 1408 Score = 30.7 bits (66), Expect = 0.93 Identities = 13/43 (30%), Positives = 26/43 (60%) Frame = +1 Query: 490 KSTMVRRCTDSFEPQSGNIFINGQNIRDVDLVSLRKAIAVVPQ 618 KS+++ ++P G + ++G+NI+++ L LR I +V Q Sbjct: 455 KSSIIPLMERFYDPTLGEVLLDGENIKNLKLEWLRSQIGLVTQ 497 >At2g39480.1 68415.m04845 ABC transporter family protein related to multi drug resistance proteins and P-glycoproteins Length = 1407 Score = 30.7 bits (66), Expect = 0.93 Identities = 13/43 (30%), Positives = 26/43 (60%) Frame = +1 Query: 490 KSTMVRRCTDSFEPQSGNIFINGQNIRDVDLVSLRKAIAVVPQ 618 KS+++ ++P G + ++G+NI+++ L LR I +V Q Sbjct: 453 KSSIIPLMERFYDPTLGEVLLDGENIKNLKLEWLRSQIGLVTQ 495 Score = 27.5 bits (58), Expect = 8.6 Identities = 10/43 (23%), Positives = 26/43 (60%) Frame = +1 Query: 490 KSTMVRRCTDSFEPQSGNIFINGQNIRDVDLVSLRKAIAVVPQ 618 KST++ ++P +G + ++G++++ +L LR + ++ Q Sbjct: 1199 KSTIISLIERYYDPVAGQVLLDGRDLKSYNLRWLRSHMGLIQQ 1241 >At3g28360.1 68416.m03544 ABC transporter family protein similar to P-glycoprotein homologue GI:2292907 from [Hordeum vulgare subsp. vulgare] Length = 1158 Score = 30.3 bits (65), Expect = 1.2 Identities = 15/43 (34%), Positives = 27/43 (62%) Frame = +1 Query: 490 KSTMVRRCTDSFEPQSGNIFINGQNIRDVDLVSLRKAIAVVPQ 618 KST++ ++P G + I+G++IR L SLR+ +++V Q Sbjct: 952 KSTVIGLIERFYDPLQGIVKIDGRDIRSYHLRSLRQHMSLVSQ 994 >At5g46540.1 68418.m05730 ABC transporter family protein contains Pfam profile: PF00005 ABC transporter; similar to multidrug-resistant protein CjMDR1 GI:14715462 from [Coptis japonica] Length = 1248 Score = 29.1 bits (62), Expect = 2.8 Identities = 12/43 (27%), Positives = 25/43 (58%) Frame = +1 Query: 490 KSTMVRRCTDSFEPQSGNIFINGQNIRDVDLVSLRKAIAVVPQ 618 KST++ ++P+SG + I+G +++ + +R I +V Q Sbjct: 398 KSTVISLIERFYDPESGEVLIDGIDLKKFQVKWIRSKIGLVSQ 440 >At2g34270.1 68415.m04193 hypothetical protein and genscan Length = 374 Score = 29.1 bits (62), Expect = 2.8 Identities = 16/41 (39%), Positives = 26/41 (63%) Frame = -2 Query: 557 PLMNMFPDCGSKESVQRRTIVDFLKFTSLNSIVAVLLSTII 435 PLMN+F D K ++R + FLK T+ S++++ +ST I Sbjct: 24 PLMNIFDD--FKSQIEREIMTIFLK-TAYESLLSIAISTEI 61 >At4g18050.1 68417.m02686 ABC transporter family protein contains Pfam profile: PF00005 ABC transporter; similar to multidrug-resistant protein CjMDR1 GI:14715462 from [Coptis japonica] Length = 1281 Score = 28.7 bits (61), Expect = 3.7 Identities = 12/43 (27%), Positives = 25/43 (58%) Frame = +1 Query: 490 KSTMVRRCTDSFEPQSGNIFINGQNIRDVDLVSLRKAIAVVPQ 618 KST++ ++P+SG + I+ +++ + L +R I +V Q Sbjct: 396 KSTVISLIERFYDPESGQVLIDNIDLKKLQLKWIRSKIGLVSQ 438 >At5g64500.1 68418.m08103 membrane protein-related contains weak similarity to spinster type IV (GI:12003976) [Drosophila melanogaster] Length = 484 Score = 28.3 bits (60), Expect = 4.9 Identities = 12/40 (30%), Positives = 21/40 (52%) Frame = -2 Query: 533 CGSKESVQRRTIVDFLKFTSLNSIVAVLLSTIIGGAFCIS 414 CG ++ I+D++ T N+ + +ST IG FC + Sbjct: 319 CGIVGTLSGGVILDYMDATISNAFKVLSVSTFIGAIFCFA 358 >At5g39040.1 68418.m04724 ABC transporter (TAP2) TAP-like ABC transporter, Rattus norvegicus, EMBL:AB027520; identical to cDNA transporter associated with antigen processing-like protein (TAP2); GI:19335723 Length = 644 Score = 28.3 bits (60), Expect = 4.9 Identities = 12/43 (27%), Positives = 23/43 (53%) Frame = +1 Query: 490 KSTMVRRCTDSFEPQSGNIFINGQNIRDVDLVSLRKAIAVVPQ 618 K+T+ ++P G I +NG ++ ++ L K I++V Q Sbjct: 437 KTTIANLIERFYDPLKGKILLNGVSLMEISHQYLHKQISIVSQ 479 >At3g13080.2 68416.m01636 ABC transporter family protein almost identical to MRP-like ABC transporter GI:2316016 from [Arabidopsis thaliana]; contains Pfam profile: PF00005 ABC transporter Length = 1489 Score = 27.9 bits (59), Expect = 6.5 Identities = 14/35 (40%), Positives = 20/35 (57%) Frame = +1 Query: 490 KSTMVRRCTDSFEPQSGNIFINGQNIRDVDLVSLR 594 KST+++ EP +G I I+G NI + L LR Sbjct: 1309 KSTLIQTLFRIVEPSAGEIRIDGVNILTIGLHDLR 1343 >At2g34660.1 68415.m04258 glutathione S-conjugate ABC transporter (MRP2) almost identical to MgATP-energized glutathione S-conjugate pump GI:2909781 from [Arabidopsis thaliana] Length = 1623 Score = 27.5 bits (58), Expect = 8.6 Identities = 12/43 (27%), Positives = 23/43 (53%) Frame = +1 Query: 490 KSTMVRRCTDSFEPQSGNIFINGQNIRDVDLVSLRKAIAVVPQ 618 KS+++ E + G I I+ ++ L+ LRK + ++PQ Sbjct: 1282 KSSLLNALFRIVEVEKGRILIDDCDVGKFGLMDLRKVLGIIPQ 1324 Database: arabidopsis Posted date: Oct 4, 2007 10:56 AM Number of letters in database: 12,070,560 Number of sequences in database: 28,952 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 11,989,105 Number of Sequences: 28952 Number of extensions: 224447 Number of successful extensions: 913 Number of sequences better than 10.0: 43 Number of HSP's better than 10.0 without gapping: 847 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 913 length of database: 12,070,560 effective HSP length: 79 effective length of database: 9,783,352 effective search space used: 1428369392 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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