Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0356
         (639 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription fa...    23   1.6  
AF225975-1|AAF74117.1|  256|Tribolium castaneum unknown protein.       23   2.1  
AY052622-1|AAL15470.1|  290|Tribolium castaneum kynurenine 3-mon...    22   3.8  
AY052393-1|AAL15467.1|  445|Tribolium castaneum kynurenine 3-mon...    22   3.8  
AY052391-1|AAL15465.1|  445|Tribolium castaneum kynurenine 3-mon...    22   3.8  
AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembran...    22   3.8  
AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembran...    22   3.8  
EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate 1-deca...    21   8.7  

>AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription
           factor protein.
          Length = 441

 Score = 23.4 bits (48), Expect = 1.6
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = +1

Query: 127 PPYACAATPTSTYSPSE 177
           PPY  +A PT + SP++
Sbjct: 332 PPYQISAQPTPSQSPNQ 348


>AF225975-1|AAF74117.1|  256|Tribolium castaneum unknown protein.
          Length = 256

 Score = 23.0 bits (47), Expect = 2.1
 Identities = 8/35 (22%), Positives = 18/35 (51%)
 Frame = +1

Query: 121 RDPPYACAATPTSTYSPSEDHIIEQNVEPRRSGRV 225
           R+ PY     PT    P +++ ++++     +GR+
Sbjct: 134 REKPYTPPRLPTVYGKPEQNYEVDESASVMTNGRI 168


>AY052622-1|AAL15470.1|  290|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 290

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 7/17 (41%), Positives = 11/17 (64%)
 Frame = +2

Query: 122 VIPHTRVPQLPPRHIHL 172
           VIP    P++ P H+H+
Sbjct: 198 VIPPENGPKMTPNHLHI 214


>AY052393-1|AAL15467.1|  445|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 445

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 7/17 (41%), Positives = 11/17 (64%)
 Frame = +2

Query: 122 VIPHTRVPQLPPRHIHL 172
           VIP    P++ P H+H+
Sbjct: 198 VIPPENGPKMTPNHLHI 214


>AY052391-1|AAL15465.1|  445|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 445

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 7/17 (41%), Positives = 11/17 (64%)
 Frame = +2

Query: 122 VIPHTRVPQLPPRHIHL 172
           VIP    P++ P H+H+
Sbjct: 198 VIPPENGPKMTPNHLHI 214


>AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembrane
           transporter protein.
          Length = 669

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 9/23 (39%), Positives = 12/23 (52%)
 Frame = +1

Query: 118 FRDPPYACAATPTSTYSPSEDHI 186
           FR P Y   + PTS   P ++ I
Sbjct: 35  FRVPTYGTTSHPTSKLVPPDERI 57


>AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembrane
           transporter white protein.
          Length = 669

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 9/23 (39%), Positives = 12/23 (52%)
 Frame = +1

Query: 118 FRDPPYACAATPTSTYSPSEDHI 186
           FR P Y   + PTS   P ++ I
Sbjct: 35  FRVPTYGTTSHPTSKLVPPDERI 57


>EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate
           1-decarboxylase protein.
          Length = 540

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 12/40 (30%), Positives = 18/40 (45%)
 Frame = -1

Query: 306 QQLDTFVGCYGGLGDGGEIPPARKSLANATGSARFDILFD 187
           +++   VG  GG GDG   P    +   A   AR+  + D
Sbjct: 178 REMRAIVGFEGGKGDGIFCPGGSIANGYAISCARYRFMPD 217


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 140,346
Number of Sequences: 336
Number of extensions: 3060
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 16501678
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)