Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0354
         (707 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory recept...    23   1.8  
AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory recept...    23   1.8  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    21   7.4  
DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          21   9.8  

>AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory receptor
           candidate 44 protein.
          Length = 313

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 6/23 (26%), Positives = 16/23 (69%)
 Frame = -3

Query: 99  FYVCSTLISQALLVKIVTNIELW 31
           +++C+T+IS  +   ++  +E+W
Sbjct: 158 YHICNTVISATVCFMMLLMLEIW 180


>AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory receptor
           candidate 4 protein.
          Length = 309

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 6/23 (26%), Positives = 16/23 (69%)
 Frame = -3

Query: 99  FYVCSTLISQALLVKIVTNIELW 31
           +++C+T+IS  +   ++  +E+W
Sbjct: 154 YHICNTVISATVCFMMLLMLEIW 176


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
            candidate 46 protein.
          Length = 1451

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 8/21 (38%), Positives = 12/21 (57%)
 Frame = +2

Query: 53   IFTKSAWLISVLHT*KFCVLL 115
            IFT+  W+ S++H  K    L
Sbjct: 1167 IFTEGIWICSLIHRKKIVKFL 1187


>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 21.0 bits (42), Expect = 9.8
 Identities = 5/9 (55%), Positives = 8/9 (88%)
 Frame = -3

Query: 492 DSVFWYTWL 466
           DS+ W+TW+
Sbjct: 471 DSLLWHTWM 479


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 154,549
Number of Sequences: 336
Number of extensions: 3162
Number of successful extensions: 5
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18738900
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)